Overlap of TF_S8 with other TFBS and distance distribution

CisView Mouse (mm6, March 2005)

Overlap of TF_S8 with other TFBS

No.	TF2	N overlap	Overlap, %	Overlap in random seq., %	Abundance of TF_S8	Abundance of TF2
1	TF_CHX	48375	55.11	45.8	87776	82243
2	TF_LHX	41929	47.76	36.35	87776	96236
3	TF_CART	25899	29.5	18.33	87776	105419
4	MIT_023CHX	22395	25.51	19.19	87776	49452
5	ADD_PIT	11028	12.56	7.54	87776	353844
6	ADD_SRF	8723	9.93	12	87776	19206
7	TF_NFY	8509	9.69	11.89	87776	54933
8	TF_MSX	8132	9.26	14.79	87776	40102
9	TF_CDP	8021	9.13	6.22	87776	70665
10	MIT_061LHX	7858	8.95	5.8	87776	12464
11	TF_HNF1	7370	8.39	6.28	87776	66746
12	TF_HOXA5	6427	7.32	12.14	87776	43053
13	TF_POU3F	6392	7.28	4.37	87776	78035
14	TF_POU6F	6272	7.14	4.51	87776	70834
15	ADD_NANOG	6185	7.04	9.48	87776	43529
16	ADD_NCX	5405	6.15	7.22	87776	47043
17	TF_CEBP	4952	5.64	5.36	87776	51516
18	TF_SOX9	4781	5.44	4.92	87776	65322

Over-represented distances with other TFBS

No.	TF2	Distance	Orienta- sion	N pairs	N backgr.	Ratio	Ratio in random	Ratio in repeats	Z	P	FDR	Distribution
1	ADD_TEL	105 - 109	-b+a	37	9	4.111	0.6	0.8	8.854	0	0
2	MIT_006SP1	60 - 64	-b+a	57	22.2	2.567	1.1	0.7	6.753	0	0
3	MIT_019	120 - 124	-b+a	40	19.5	2.051	1.2	0.8	5.764	0	0

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