CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of ADD_FOXP1

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
ADD_FOXP1
ADD_FOXP1 alone
In pair
with
1GO:0003677 DNA binding
1509
before_TSS
100
yes
 
2GO:0030528 transcription regulator activity
941
before_TSS
62
yes
 
3GO:0003700 transcription factor activity
719
before_TSS
51
yes
 
4GO:0009607 response to biotic stimulus
483
at_TSS
43
yes
 
5GO:0006952 defense response
463
at_TSS
42
yes
 
6GO:0006955 immune response
379
at_TSS
33
yes
 
7GO:0006259 DNA metabolism
427
at_TSS
30
yes
 
8GO:0016779 nucleotidyltransferase activity
91
before_TSS
28
yes
 
9GO:0004857 enzyme inhibitor activity
155
after_TSS
24
yes
 
10GO:0043207 response to external biotic stimulus
237
at_TSS
22
yes
 
11GO:0004866 endopeptidase inhibitor activity
112
at_TSS,after_TSS
19
yes
 
12GO:0030414 protease inhibitor activity
112
at_TSS,after_TSS
19
yes
 
13GO:0009613 response to pest, pathogen or parasite
221
at_TSS
19
yes
 
14GO:0005179 hormone activity
97
after_TSS
18
yes
 
15GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
208
at_TSS
17
yes
 
16GO:0007167 enzyme linked receptor protein signaling pathway
157
before_TSS
17
yes
 
17GO:0006325 establishment and/or maintenance of chromatin architecture
179
at_TSS
16
yes
 
18GO:0006461 protein complex assembly
123
at_TSS
16
yes
 
19GO:0006323 DNA packaging
188
at_TSS
16
yes
 
20GO:0006333 chromatin assembly or disassembly
121
at_TSS
15
yes
 
21GO:0004867 serine-type endopeptidase inhibitor activity
77
after_TSS
15
yes
 
22GO:0031497 chromatin assembly
95
at_TSS
14
yes
 
23GO:0006334 nucleosome assembly
86
at_TSS
14
yes
 
24GO:0005529 sugar binding
144
at_TSS
14
yes
 
25GO:0009892 negative regulation of metabolism
149
before_TSS
14
yes
 
26GO:0031324 negative regulation of cellular metabolism
132
before_TSS
12
yes
 
27GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
121
before_TSS
12
yes
 
28GO:0003899 DNA-directed RNA polymerase activity
30
before_TSS
12
yes
 
29GO:0016481 negative regulation of transcription
115
before_TSS
11
yes
 
30GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
83
before_TSS
10
yes
 

Details on Gene Ontology terms for targets of ADD_FOXP1

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
yes
before_TSS
100
1509
6.6
4.2
1.55
4.878
0
0
GO:0003677 DNA binding
2none
 
yes
before_TSS
62
941
6.5
4.2
1.54
3.692
0.0002
0.0008
GO:0030528 transcription regulator activity
3none
 
 
after_TSS
51
356
14.3
8.9
1.59
3.586
0.0003
0.0042
GO:0005576
4none
 
yes
before_TSS
51
719
7
4.2
1.66
3.887
0.0001
0.0005
GO:0003700 transcription factor activity
5none
 
 
at_TSS
43
483
8.9
4.3
2.04
4.998
0
0
GO:0009607 response to biotic stimulus
6none
 
 
at_TSS
42
463
9
4.3
2.08
5.071
0
0
GO:0006952 defense response
7none
 
 
at_TSS
33
379
8.7
4.3
1.99
4.218
0
0.0006
GO:0006955 immune response
8none
 
 
at_TSS
30
427
7
4.3
1.61
2.753
0.0059
0.0745
GO:0006259 DNA metabolism
9none
yes
 
before_TSS
28
91
30.7
12.3
2.48
5.355
0
0
GO:0016779 nucleotidyltransferase activity
10none
 
yes
before_TSS
24
302
7.9
4.2
1.86
3.218
0.0012
0.006
GO:0005667
11none
 
 
after_TSS
24
155
15.4
8.9
1.72
2.854
0.0043
0.0687
GO:0004857 enzyme inhibitor activity
12none
 
 
at_TSS
22
237
9.2
4.3
2.13
3.754
0.0001
0.0033
GO:0043207 response to external biotic stimulus
13none
 
 
after_TSS
19
112
16.9
8.9
1.89
2.972
0.0029
0.0492
GO:0030414 protease inhibitor activity
14none
 
 
after_TSS
19
112
16.9
8.9
1.89
2.972
0.0029
0.0492
GO:0004866 endopeptidase inhibitor activity
15none
 
 
at_TSS
19
221
8.5
4.3
1.97
3.119
0.0018
0.0221
GO:0009613 response to pest, pathogen or parasite
16none
 
 
after_TSS
18
97
18.5
8.9
2.06
3.315
0.0009
0.0134
GO:0005179 hormone activity
17none
 
yes
before_TSS
17
157
10.8
4.2
2.54
4.106
0
0.0036
GO:0007167 enzyme linked receptor protein signaling pathway
18none
 
 
at_TSS
17
208
8.1
4.3
1.87
2.722
0.0064
0.0949
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
19none
 
 
at_TSS
16
123
13
4.3
2.98
4.726
0
0
GO:0006461 protein complex assembly
20none
 
 
at_TSS
16
179
8.9
4.3
2.05
3.027
0.0024
0.043
GO:0006325 establishment and/or maintenance of chromatin architecture
21none
 
 
at_TSS
16
188
8.5
4.3
1.95
2.814
0.0048
0.0746
GO:0006323 DNA packaging
22none
 
 
at_TSS
15
121
12.3
4.3
2.84
4.356
0
0.0003
GO:0006333 chromatin assembly or disassembly
23none
 
 
after_TSS
15
77
19.4
8.9
2.17
3.236
0.0012
0.0443
GO:0004867 serine-type endopeptidase inhibitor activity
24none
 
 
at_TSS
14
144
9.7
4.3
2.23
3.175
0.0014
0.0391
GO:0005529 sugar binding
25none
 
yes
before_TSS
14
149
9.3
4.2
2.2
3.128
0.0017
0.0339
GO:0009892 negative regulation of metabolism
26none
 
 
at_TSS
14
86
16.2
4.3
3.73
5.437
0
0
GO:0006334 nucleosome assembly
27none
 
 
at_TSS
14
95
14.7
4.3
3.38
4.978
0
0
GO:0031497 chromatin assembly
28none
 
 
at_TSS
13
78
16.6
4.3
3.82
5.345
0
0
GO:0000786
29none
yes
 
before_TSS
12
30
40
12.3
3.23
4.605
0
0.0015
GO:0003899 DNA-directed RNA polymerase activity
30none
 
 
at_TSS
12
112
10.7
4.3
2.46
3.313
0.0009
0.0307
GO:0030414 protease inhibitor activity
31none
 
yes
before_TSS
12
132
9
4.2
2.13
2.767
0.0056
0.0862
GO:0031324 negative regulation of cellular metabolism
32none
 
yes
before_TSS
12
121
9.9
4.2
2.33
3.101
0.0019
0.0306
GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
33none
 
 
at_TSS
12
112
10.7
4.3
2.46
3.313
0.0009
0.0307
GO:0004866 endopeptidase inhibitor activity
34none
 
yes
before_TSS
11
115
9.5
4.2
2.24
2.834
0.0045
0.0647
GO:0016481 negative regulation of transcription
35none
 
 
at_TSS
11
88
12.5
4.3
2.87
3.757
0.0001
0.0048
GO:0005694
36none
 
yes
before_TSS
10
83
12
4.2
2.83
3.529
0.0004
0.0763
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway