CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of ADD_GAS

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
ADD_GAS
ADD_GAS alone
In pair
with
1GO:0009653 morphogenesis
811
before_TSS
50
yes
 
2GO:0009607 response to biotic stimulus
483
at_TSS
49
yes
 
3GO:0006952 defense response
463
at_TSS
47
yes
 
4GO:0006955 immune response
379
at_TSS
37
yes
 
5GO:0043207 response to external biotic stimulus
237
at_TSS
23
yes
 
6GO:0009613 response to pest, pathogen or parasite
221
at_TSS
22
yes
 
7GO:0005125 cytokine activity
173
at_TSS,before_TSS
20
yes
 
8GO:0006357 regulation of transcription from RNA polymerase II promoter
191
after_TSS
12
yes
 

Details on Gene Ontology terms for targets of ADD_GAS

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
at_TSS
56
613
9.1
5.2
1.73
4.406
0
0.0002
GO:0005622
2none
 
yes
before_TSS
50
811
6.1
4
1.53
3.243
0.0011
0.005
GO:0009653 morphogenesis
3none
 
 
at_TSS
49
483
10.1
5.2
1.92
4.903
0
0
GO:0009607 response to biotic stimulus
4none
 
 
at_TSS
47
463
10.1
5.2
1.92
4.802
0
0
GO:0006952 defense response
5none
 
 
at_TSS
37
379
9.7
5.2
1.85
3.985
0
0.0014
GO:0006955 immune response
6none
 
 
at_TSS
30
356
8.4
5.2
1.6
2.713
0.0066
0.0508
GO:0005576
7none
 
 
at_TSS
23
237
9.7
5.2
1.84
3.092
0.0019
0.0202
GO:0043207 response to external biotic stimulus
8none
 
 
at_TSS
22
221
9.9
5.2
1.89
3.152
0.0016
0.0211
GO:0009613 response to pest, pathogen or parasite
9none
 
 
at_TSS
20
173
11.5
5.2
2.19
3.736
0.0001
0.0097
GO:0005125 cytokine activity
10none
 
yes
before_TSS
17
173
9.8
4
2.45
3.93
0
0.031
GO:0005125 cytokine activity
11none
 
yes
after_TSS
12
191
6.2
2.7
2.3
3.041
0.0023
0.0719
GO:0006357 regulation of transcription from RNA polymerase II promoter
12none
 
yes
before_TSS
11
88
12.5
4
3.11
4.076
0
0.002
GO:0005694