Gene Ontology terms for targets of ADD

CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of ADD_LRH

No.	GO annotation	Total genes with GO	Location	Max no. of genes with ADD_LRH	ADD_LRH alone	In pair with
1	GO:0030554 adenyl nucleotide binding	1036	before_TSS	89		TF_ATF1, TF_CREB,
2	GO:0005524 ATP binding	1011	before_TSS	87		TF_ATF1, TF_CREB,
3	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)	208	before_TSS,after_TSS	80	yes	many
4	GO:0006323 DNA packaging	188	before_TSS,after_TSS	76	yes	many
5	GO:0006325 establishment and/or maintenance of chromatin architecture	179	before_TSS,after_TSS	73	yes	many
6	GO:0015399 primary active transporter activity	168	after_TSS	71	yes	TF_HNF4, ADD_LRH,
7	GO:0016043 cell organization and biogenesis	839	after_TSS	66	yes	many
8	GO:0006732 coenzyme metabolism	159	after_TSS	62	yes	many
9	GO:0006461 protein complex assembly	123	before_TSS,after_TSS	62	yes	many
10	GO:0006333 chromatin assembly or disassembly	121	before_TSS,after_TSS	61	yes	many
11	GO:0015980 energy derivation by oxidation of organic compounds	115	after_TSS	56	yes
12	GO:0015077 monovalent inorganic cation transporter activity	138	after_TSS	56	yes	TF_HNF4, ADD_LRH,
13	GO:0015078 hydrogen ion transporter activity	133	after_TSS	55	yes	TF_HNF4, ADD_LRH,
14	GO:0031497 chromatin assembly	95	before_TSS,after_TSS	54	yes	many
15	GO:0006334 nucleosome assembly	86	before_TSS,after_TSS	53	yes	many
16	GO:0044249 cellular biosynthesis	776	after_TSS	52	yes
17	GO:0006259 DNA metabolism	427	before_TSS,after_TSS	52	yes	many
18	GO:0006996 organelle organization and biogenesis	645	after_TSS	51	yes	many
19	GO:0006092 main pathways of carbohydrate metabolism	84	after_TSS	46	yes
20	GO:0006091 generation of precursor metabolites and energy	492	after_TSS	43	yes	TF_HNF4,
21	GO:0016491 oxidoreductase activity	573	after_TSS	40	yes
22	GO:0051276 chromosome organization and biogenesis	220	before_TSS,after_TSS	39	yes	many
23	GO:0008236 serine-type peptidase activity	158	at_TSS	34	yes
24	GO:0005386 carrier activity	394	after_TSS	33	yes	TF_ER,
25	GO:0009059 macromolecule biosynthesis	472	after_TSS	33	yes
26	GO:0004252 serine-type endopeptidase activity	140	at_TSS	31	yes
27	GO:0006412 protein biosynthesis	421	after_TSS	31	yes
28	GO:0051186 cofactor metabolism	181	after_TSS	26	yes	many
29	GO:0046164 alcohol catabolism	52	after_TSS	25	yes
30	GO:0004295 trypsin activity	101	at_TSS	24	yes
31	GO:0016887 ATPase activity	280	before_TSS	24		TF_POLYA,
32	GO:0004263 chymotrypsin activity	90	at_TSS	23	yes
33	GO:0016614 oxidoreductase activity, acting on CH-OH group of donors	93	at_TSS	21	yes
34	GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	85	at_TSS	20	yes
35	GO:0051187 cofactor catabolism	29	after_TSS	20	yes
36	GO:0006084 acetyl-CoA metabolism	31	after_TSS	19	yes
37	GO:0007600 sensory perception	196	after_TSS	19	yes
38	GO:0015672 monovalent inorganic cation transport	259	at_TSS	19		TF_MAZR,
39	GO:0009109 coenzyme catabolism	26	after_TSS	18	yes
40	GO:0030001 metal ion transport	288	at_TSS	18		TF_MAZR,
41	GO:0003954 NADH dehydrogenase activity	32	after_TSS	17	yes
42	GO:0015081 sodium ion transporter activity	32	after_TSS	17	yes
43	GO:0046356 acetyl-CoA catabolism	23	after_TSS	17	yes
44	GO:0016655 oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor	34	after_TSS	17	yes
45	GO:0050136 NADH dehydrogenase (quinone) activity	32	after_TSS	17	yes
46	GO:0008137 NADH dehydrogenase (ubiquinone) activity	32	after_TSS	17	yes
47	GO:0009060 aerobic respiration	22	after_TSS	16	yes
48	GO:0008380 RNA splicing	154	before_TSS	16		TF_E4BP4,
49	GO:0006099 tricarboxylic acid cycle	22	after_TSS	16	yes
50	GO:0005216 ion channel activity	269	at_TSS	16		TF_MAZR,
51	GO:0045333 cellular respiration	25	after_TSS	16	yes
52	GO:0005489 electron transporter activity	150	after_TSS	16	yes
53	GO:0000398 nuclear mRNA splicing, via spliceosome	149	before_TSS	15		TF_E4BP4,
54	GO:0019941 modification-dependent protein catabolism	94	before_TSS	15		TF_RFX,
55	GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	149	before_TSS	15		TF_E4BP4,
56	GO:0000902 cellular morphogenesis	238	after_TSS	15		MIT_035MYOD,
57	GO:0009613 response to pest, pathogen or parasite	221	before_TSS	15		ADD_OCT4A,
58	GO:0000375 RNA splicing, via transesterification reactions	149	before_TSS	15		TF_E4BP4,
59	GO:0006511 ubiquitin-dependent protein catabolism	94	before_TSS	15		TF_RFX,
60	GO:0005261 cation channel activity	198	at_TSS	15		TF_MAZR,
61	GO:0006813 potassium ion transport	135	at_TSS	14		TF_MAZR,
62	GO:0005244 voltage-gated ion channel activity	134	at_TSS	14		TF_MAZR,
63	GO:0044262 cellular carbohydrate metabolism	205	after_TSS	13		TF_RORA, TF_AML,
64	GO:0051188 cofactor biosynthesis	106	after_TSS	13	yes
65	GO:0005267 potassium channel activity	112	at_TSS	13		TF_MAZR,
66	GO:0015405 P-P-bond-hydrolysis-driven transporter activity	113	after_TSS	12	yes
67	GO:0009108 coenzyme biosynthesis	94	after_TSS	12	yes
68	GO:0008289 lipid binding	131	after_TSS	12		TF_MEIS,
69	GO:0007389 pattern specification	128	at_TSS	11	yes
70	GO:0016790 thiolester hydrolase activity	57	before_TSS	11		TF_RFX,
71	GO:0006752 group transfer coenzyme metabolism	75	after_TSS	10	yes
72	GO:0006954 inflammatory response	101	before_TSS	10		ADD_OCT4A,
73	GO:0006119 oxidative phosphorylation	67	after_TSS	10	yes
74	GO:0005249 voltage-gated potassium channel activity	89	at_TSS	10	yes	TF_MAZR,
75	GO:0004221 ubiquitin thiolesterase activity	43	before_TSS	10		TF_RFX,
76	GO:0006818 hydrogen transport	80	after_TSS	10	yes
77	GO:0015992 proton transport	80	after_TSS	10	yes
78	GO:0004843 ubiquitin-specific protease activity	44	before_TSS	10		TF_RFX,

Pairs of ADD_LRH binding sites with other TFBS

No.	TFBS	Location	Total GO-s	Main GO annotation	N pairs for main GO	Total genes for main GO
1	TF_ATF1	before_TSS,after_TSS	14	GO:0030554 adenyl nucleotide binding	88	1036
2	TF_CREB	before_TSS,after_TSS	13	GO:0030554 adenyl nucleotide binding	89	1036
3	TF_ARNT	after_TSS	11	GO:0016043 cell organization and biogenesis	57	839
4	TF_AHR	before_TSS,after_TSS	11	GO:0006259 DNA metabolism	52	427
5	TF_HTF	after_TSS	11	GO:0016043 cell organization and biogenesis	60	839
6	TF_STAF	before_TSS	9	GO:0006259 DNA metabolism	30	427
7	TF_PAX4	before_TSS	9	GO:0006259 DNA metabolism	35	427
8	TF_ATF6	after_TSS	9	GO:0006996 organelle organization and biogenesis	43	645
9	TF_ER	before_TSS,after_TSS	9	GO:0051276 chromosome organization and biogenesis	24	220
10	MIT_120	before_TSS,after_TSS	8	GO:0051276 chromosome organization and biogenesis	19	220
11	TF_MAZR	at_TSS	8	GO:0015672 monovalent inorganic cation transport	19	259
12	ADD_LRH	before_TSS,after_TSS	8	GO:0006461 protein complex assembly	15	123
13	MIT_169	before_TSS,after_TSS	8	GO:0051276 chromosome organization and biogenesis	19	220
14	TF_NF1	before_TSS	8	GO:0051276 chromosome organization and biogenesis	17	220
15	MIT_165	before_TSS	8	GO:0051276 chromosome organization and biogenesis	15	220
16	TF_E2F	before_TSS,after_TSS	8	GO:0051276 chromosome organization and biogenesis	18	220
17	TF_SP1	before_TSS,after_TSS	8	GO:0006323 DNA packaging	25	188
18	MIT_001NRF1	after_TSS	8	GO:0006461 protein complex assembly	13	123
19	MIT_013LEF	before_TSS,after_TSS	7	GO:0006259 DNA metabolism	23	427
20	MIT_140	before_TSS	7	GO:0051276 chromosome organization and biogenesis	16	220
21	TF_AP2	before_TSS,after_TSS	7	GO:0006334 nucleosome assembly	11	86
22	TF_RFX	before_TSS	5	GO:0019941 modification-dependent protein catabolism	15	94
23	TF_RFX1	before_TSS	4	GO:0031497 chromatin assembly	13	95
24	TF_HNF4	after_TSS	4	GO:0006091 generation of precursor metabolites and energy	27	492
25	TF_E4BP4	before_TSS	4	GO:0008380 RNA splicing	16	154
26	TF_RORA	after_TSS	3	GO:0051186 cofactor metabolism	13	181
27	MIT_101	before_TSS	3	GO:0006461 protein complex assembly	11	123
28	ADD_OCT4A	before_TSS	2	GO:0009613 response to pest, pathogen or parasite	15	221
29	TF_EGR1	before_TSS,after_TSS	2	GO:0051276 chromosome organization and biogenesis	13	220
30	TF_AP2A	after_TSS	2	GO:0051186 cofactor metabolism	24	181
31	TF_COUP	after_TSS	2	GO:0051186 cofactor metabolism	11	181
32	TF_MYB	after_TSS	1	GO:0006732 coenzyme metabolism	10	159
33	TF_AML	after_TSS	1	GO:0044262 cellular carbohydrate metabolism	13	205
34	TF_MEIS	after_TSS	1	GO:0008289 lipid binding	12	131
35	TF_POLYA	before_TSS	1	GO:0016887 ATPase activity	24	280
36	MIT_035MYOD	after_TSS	1	GO:0000902 cellular morphogenesis	15	238

Details on Gene Ontology terms for targets of ADD_LRH

Total number of genes = 12103

No.	In pair with	Multi- ple	Conser- ved	Location	Frequency in list	U-clusters in list	Genes with TFBS in list, %	Genes with TFBS total, %	Ratio	z	p	FDR	GO annotation
1	none			after_TSS	80	208	38.4	25.6	1.5	4.272	0	0.0006	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
2	none			after_TSS	76	188	40.4	25.6	1.57	4.679	0	0.0001	GO:0006323 DNA packaging
3	none			after_TSS	73	179	40.7	25.6	1.59	4.674	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
4	none			after_TSS	71	168	42.2	25.6	1.64	4.969	0	0	GO:0015399 primary active transporter activity
5	none			after_TSS	62	123	50.4	25.6	1.96	6.323	0	0	GO:0006461 protein complex assembly
6	none			after_TSS	62	159	38.9	25.6	1.52	3.882	0.0001	0.0075	GO:0006732 coenzyme metabolism
7	none			after_TSS	61	121	50.4	25.6	1.96	6.272	0	0	GO:0006333 chromatin assembly or disassembly
8	none	yes		after_TSS	57	547	10.4	4.2	2.43	7.261	0	0	GO:0005739
9	none			after_TSS	56	115	48.6	25.6	1.89	5.689	0	0	GO:0015980 energy derivation by oxidation of organic compounds
10	none			after_TSS	56	138	40.5	25.6	1.58	4.042	0	0.0027	GO:0015077 monovalent inorganic cation transporter activity
11	none			after_TSS	55	133	41.3	25.6	1.61	4.173	0	0.0015	GO:0015078 hydrogen ion transporter activity
12	none			after_TSS	54	95	56.8	25.6	2.21	6.992	0	0	GO:0031497 chromatin assembly
13	none	yes		after_TSS	54	839	6.4	4.2	1.5	3.198	0.0013	0.0844	GO:0016043 cell organization and biogenesis
14	none			after_TSS	53	86	61.6	25.6	2.4	7.67	0	0	GO:0006334 nucleosome assembly
15	none	yes		after_TSS	52	776	6.7	4.2	1.56	3.444	0.0005	0.019	GO:0044249 cellular biosynthesis
16	none			after_TSS	52	78	66.6	25.6	2.6	8.325	0	0	GO:0000786
17	none			after_TSS	46	84	54.7	25.6	2.13	6.134	0	0	GO:0006092 main pathways of carbohydrate metabolism
18	none			after_TSS	45	88	51.1	25.6	1.99	5.497	0	0	GO:0005694
19	none	yes		after_TSS	45	645	6.9	4.2	1.63	3.477	0.0005	0.0265	GO:0006996 organelle organization and biogenesis
20	none	yes		after_TSS	43	492	8.7	4.2	2.04	4.989	0	0.0001	GO:0006091 generation of precursor metabolites and energy
21	none	yes		after_TSS	40	573	6.9	4.2	1.63	3.272	0.001	0.0434	GO:0016491 oxidoreductase activity
22	none		yes	before_TSS	39	220	17.7	8.2	2.15	5.18	0	0	GO:0051276 chromosome organization and biogenesis
23	none		yes	before_TSS	38	302	12.5	8.2	1.53	2.794	0.0052	0.02	GO:0005667
24	none		yes	before_TSS	37	208	17.7	8.2	2.16	5.066	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
25	none		yes	before_TSS	36	188	19.1	8.2	2.32	5.497	0	0	GO:0006323 DNA packaging
26	none		yes	before_TSS	35	179	19.5	8.2	2.37	5.56	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
27	none	yes		after_TSS	35	427	8.1	4.2	1.91	4.071	0	0.0015	GO:0006259 DNA metabolism
28	none			at_TSS	34	158	21.5	12.1	1.76	3.621	0.0002	0.0153	GO:0008236 serine-type peptidase activity
29	none	yes		after_TSS	33	394	8.3	4.2	1.95	4.083	0	0.004	GO:0005386 carrier activity
30	none	yes		after_TSS	33	472	6.9	4.2	1.63	2.968	0.0029	0.0783	GO:0009059 macromolecule biosynthesis
31	none	yes		after_TSS	32	220	14.5	4.2	3.39	7.591	0	0	GO:0051276 chromosome organization and biogenesis
32	none	yes		after_TSS	32	208	15.3	4.2	3.59	7.981	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
33	none			at_TSS	31	140	22.1	12.1	1.82	3.633	0.0002	0.0113	GO:0004252 serine-type endopeptidase activity
34	none	yes		after_TSS	31	188	16.4	4.2	3.85	8.335	0	0	GO:0006323 DNA packaging
35	none	yes		after_TSS	31	421	7.3	4.2	1.72	3.181	0.0014	0.0413	GO:0006412 protein biosynthesis
36	none	yes		after_TSS	31	179	17.3	4.2	4.04	8.682	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
37	none	yes		after_TSS	30	123	24.3	4.2	5.69	11.075	0	0	GO:0006461 protein complex assembly
38	none	yes		after_TSS	29	121	23.9	4.2	5.59	10.752	0	0	GO:0006333 chromatin assembly or disassembly
39	none		yes	before_TSS	28	123	22.7	8.2	2.76	5.901	0	0	GO:0006461 protein complex assembly
40	none	yes		after_TSS	28	78	35.8	4.2	8.38	13.84	0	0	GO:0000786
41	none			after_TSS	27	53	50.9	25.6	1.98	4.228	0	0.0014	GO:0019866
42	none	yes		after_TSS	27	95	28.4	4.2	6.64	11.67	0	0	GO:0031497 chromatin assembly
43	none	yes		after_TSS	27	86	31.3	4.2	7.33	12.467	0	0	GO:0006334 nucleosome assembly
44	none		yes	before_TSS	26	121	21.4	8.2	2.61	5.339	0	0	GO:0006333 chromatin assembly or disassembly
45	none			after_TSS	25	52	48	25.6	1.87	3.713	0.0002	0.0749	GO:0046164 alcohol catabolism
46	none	yes		before_TSS	25	123	20.3	10.5	1.93	3.571	0.0003	0.0162	GO:0006461 protein complex assembly
47	none		yes	before_TSS	24	86	27.9	8.2	3.39	6.669	0	0	GO:0006334 nucleosome assembly
48	none		yes	before_TSS	24	95	25.2	8.2	3.07	6.07	0	0	GO:0031497 chromatin assembly
49	none			at_TSS	24	101	23.7	12.1	1.95	3.581	0.0003	0.0104	GO:0004295 trypsin activity
50	none	yes		after_TSS	24	88	27.2	4.2	6.37	10.694	0	0	GO:0005694
51	none			at_TSS	23	90	25.5	12.1	2.1	3.901	0	0.0031	GO:0004263 chymotrypsin activity
52	none	yes		after_TSS	21	168	12.5	4.2	2.92	5.3	0	0	GO:0015399 primary active transporter activity
53	none	yes		after_TSS	21	181	11.6	4.2	2.71	4.903	0	0.0001	GO:0051186 cofactor metabolism
54	none			at_TSS	21	93	22.5	12.1	1.85	3.085	0.002	0.0931	GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
55	none			after_TSS	20	29	68.9	25.6	2.68	5.349	0	0	GO:0051187 cofactor catabolism
56	none	yes		after_TSS	20	159	12.5	4.2	2.93	5.204	0	0	GO:0006732 coenzyme metabolism
57	none			at_TSS	20	85	23.5	12.1	1.93	3.217	0.0012	0.0677	GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
58	none	yes		before_TSS	20	78	25.6	10.5	2.44	4.375	0	0.0006	GO:0000786
59	none	yes		before_TSS	19	86	22	10.5	2.1	3.518	0.0004	0.0176	GO:0006334 nucleosome assembly
60	none	yes		after_TSS	19	196	9.6	4.2	2.26	3.775	0.0001	0.0058	GO:0007600 sensory perception
61	none			after_TSS	19	31	61.2	25.6	2.39	4.551	0	0.0019	GO:0006084 acetyl-CoA metabolism
62	none		yes	before_TSS	19	88	21.5	8.2	2.62	4.582	0	0.0003	GO:0005694
63	none	yes		before_TSS	19	95	20	10.5	1.9	3.031	0.0024	0.0524	GO:0031497 chromatin assembly
64	none	yes		after_TSS	18	133	13.5	4.2	3.16	5.301	0	0	GO:0015078 hydrogen ion transporter activity
65	none	yes		after_TSS	18	138	13	4.2	3.04	5.115	0	0	GO:0015077 monovalent inorganic cation transporter activity
66	none			after_TSS	18	26	69.2	25.6	2.7	5.095	0	0.0001	GO:0009109 coenzyme catabolism
67	none			after_TSS	17	32	53.1	25.6	2.07	3.565	0.0003	0.0443	GO:0008137 NADH dehydrogenase (ubiquinone) activity
68	none			after_TSS	17	32	53.1	25.6	2.07	3.565	0.0003	0.0443	GO:0050136 NADH dehydrogenase (quinone) activity
69	none			after_TSS	17	23	73.9	25.6	2.88	5.307	0	0	GO:0046356 acetyl-CoA catabolism
70	none			after_TSS	17	32	53.1	25.6	2.07	3.565	0.0003	0.0443	GO:0015081 sodium ion transporter activity
71	none			after_TSS	17	32	53.1	25.6	2.07	3.565	0.0003	0.0443	GO:0003954 NADH dehydrogenase activity
72	none			after_TSS	17	34	50	25.6	1.95	3.257	0.0011	0.0824	GO:0016655 oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
73	none			after_TSS	16	22	72.7	25.6	2.83	5.062	0	0.0001	GO:0009060 aerobic respiration
74	none			after_TSS	16	22	72.7	25.6	2.83	5.062	0	0.0001	GO:0006099 tricarboxylic acid cycle
75	none			after_TSS	16	25	64	25.6	2.49	4.397	0	0.004	GO:0045333 cellular respiration
76	none	yes		after_TSS	16	150	10.6	4.2	2.49	3.888	0.0001	0.0123	GO:0005489 electron transporter activity
77	none	yes	yes	before_TSS	13	179	7.2	0.8	8.37	9.294	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
78	none	yes	yes	before_TSS	13	220	5.9	0.8	6.81	8.137	0	0	GO:0051276 chromosome organization and biogenesis
79	none	yes	yes	before_TSS	13	208	6.2	0.8	7.2	8.443	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
80	none	yes		after_TSS	13	106	12.2	4.2	2.86	4.079	0	0.0041	GO:0051188 cofactor biosynthesis
81	none	yes	yes	before_TSS	13	121	10.7	0.8	12.38	11.773	0	0	GO:0006333 chromatin assembly or disassembly
82	none	yes	yes	before_TSS	13	188	6.9	0.8	7.97	9.01	0	0	GO:0006323 DNA packaging
83	none	yes		after_TSS	12	113	10.6	4.2	2.48	3.344	0.0008	0.0755	GO:0015405 P-P-bond-hydrolysis-driven transporter activity
84	none	yes		after_TSS	12	94	12.7	4.2	2.98	4.08	0	0.0082	GO:0009108 coenzyme biosynthesis
85	none		yes	at_TSS	11	128	8.5	3.6	2.36	3.012	0.0025	0.0558	GO:0007389 pattern specification
86	none		yes	at_TSS	10	89	11.2	3.6	3.09	3.844	0.0001	0.0443	GO:0005249 voltage-gated potassium channel activity
87	none		yes	at_TSS	10	78	12.8	3.6	3.52	4.347	0	0.005	GO:0000786
88	none	yes		after_TSS	10	67	14.9	4.2	3.48	4.316	0	0.0019	GO:0006119 oxidative phosphorylation
89	none	yes		after_TSS	10	80	12.5	4.2	2.92	3.644	0.0002	0.0491	GO:0006818 hydrogen transport
90	none	yes		after_TSS	10	80	12.5	4.2	2.92	3.644	0.0002	0.0491	GO:0015992 proton transport
91	none	yes		after_TSS	10	75	13.3	4.2	3.11	3.885	0.0001	0.0187	GO:0006752 group transfer coenzyme metabolism
92	ADD_LRH			before_TSS	15	123	12.1	3.2	3.79	5.676	0	0	GO:0006461 protein complex assembly
93	ADD_LRH			after_TSS	13	168	7.7	1.5	5	6.553	0	0	GO:0015399 primary active transporter activity
94	ADD_LRH			after_TSS	12	138	8.6	1.5	5.62	6.849	0	0	GO:0015077 monovalent inorganic cation transporter activity
95	ADD_LRH			after_TSS	12	133	9	1.5	5.83	7.03	0	0	GO:0015078 hydrogen ion transporter activity
96	ADD_LRH			after_TSS	11	159	6.9	1.5	4.47	5.529	0	0.0003	GO:0006732 coenzyme metabolism
97	ADD_LRH			after_TSS	11	181	6	1.5	3.93	4.981	0	0.0068	GO:0051186 cofactor metabolism
98	ADD_LRH			before_TSS	10	95	10.5	3.2	3.27	4.056	0	0.0168	GO:0031497 chromatin assembly
99	ADD_LRH			before_TSS	10	78	12.8	3.2	3.98	4.825	0	0.0005	GO:0000786
100	ADD_LRH			before_TSS	10	86	11.6	3.2	3.61	4.439	0	0.0031	GO:0006334 nucleosome assembly
101	ADD_OCT4A			before_TSS	15	221	6.7	2.3	2.85	4.338	0	0.0621	GO:0009613 response to pest, pathogen or parasite
102	ADD_OCT4A			before_TSS	10	101	9.9	2.3	4.16	4.98	0	0.0137	GO:0006954 inflammatory response
103	MIT_001NRF1			after_TSS	13	123	10.5	0.3	31.19	19.626	0	0	GO:0006461 protein complex assembly
104	MIT_001NRF1			after_TSS	12	95	12.6	0.3	37.28	20.701	0	0	GO:0031497 chromatin assembly
105	MIT_001NRF1			after_TSS	12	208	5.7	0.3	17.03	13.595	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
106	MIT_001NRF1			after_TSS	12	179	6.7	0.3	19.78	14.765	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
107	MIT_001NRF1			after_TSS	12	86	13.9	0.3	41.19	21.806	0	0	GO:0006334 nucleosome assembly
108	MIT_001NRF1			after_TSS	12	78	15.3	0.3	45.41	22.942	0	0	GO:0000786
109	MIT_001NRF1			after_TSS	12	121	9.9	0.3	29.27	18.224	0	0	GO:0006333 chromatin assembly or disassembly
110	MIT_001NRF1			after_TSS	12	220	5.4	0.3	16.1	13.178	0	0	GO:0051276 chromosome organization and biogenesis
111	MIT_001NRF1			after_TSS	12	188	6.3	0.3	18.84	14.374	0	0	GO:0006323 DNA packaging
112	MIT_001NRF1			after_TSS	11	88	12.5	0.3	36.89	19.705	0	0	GO:0005694
113	MIT_013LEF			after_TSS	23	427	5.3	2.5	2.13	3.83	0.0001	0.0791	GO:0006259 DNA metabolism
114	MIT_013LEF			before_TSS	19	123	15.4	6.6	2.31	3.911	0	0.0354	GO:0006461 protein complex assembly
115	MIT_013LEF			before_TSS	19	121	15.7	6.6	2.34	3.991	0	0.0234	GO:0006333 chromatin assembly or disassembly
116	MIT_013LEF			before_TSS	17	86	19.7	6.6	2.95	4.875	0	0.0004	GO:0006334 nucleosome assembly
117	MIT_013LEF			before_TSS	17	95	17.8	6.6	2.67	4.392	0	0.0041	GO:0031497 chromatin assembly
118	MIT_013LEF			after_TSS	16	220	7.2	2.5	2.87	4.523	0	0.0044	GO:0051276 chromosome organization and biogenesis
119	MIT_013LEF			after_TSS	16	208	7.6	2.5	3.04	4.785	0	0.0013	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
120	MIT_013LEF			before_TSS	15	78	19.2	6.6	2.87	4.45	0	0.0033	GO:0000786
121	MIT_013LEF			before_TSS	15	88	17	6.6	2.55	3.905	0	0.0354	GO:0005694
122	MIT_035MYOD			after_TSS	15	238	6.3	1.8	3.45	5.209	0	0.0082	GO:0000902 cellular morphogenesis
123	MIT_101			before_TSS	11	123	8.9	2.9	3.08	4.014	0	0.0243	GO:0006461 protein complex assembly
124	MIT_101			before_TSS	10	95	10.5	2.9	3.62	4.446	0	0.0033	GO:0031497 chromatin assembly
125	MIT_101			before_TSS	10	78	12.8	2.9	4.42	5.237	0	0	GO:0000786
126	MIT_101			before_TSS	10	86	11.6	2.9	4	4.84	0	0.0005	GO:0006334 nucleosome assembly
127	MIT_120			before_TSS	19	179	10.6	0.2	38.92	26.731	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
128	MIT_120			before_TSS	19	86	22	0.2	81.02	38.942	0	0	GO:0006334 nucleosome assembly
129	MIT_120			before_TSS	19	123	15.4	0.2	56.65	32.437	0	0	GO:0006461 protein complex assembly
130	MIT_120			before_TSS	19	220	8.6	0.2	31.67	24.008	0	0	GO:0051276 chromosome organization and biogenesis
131	MIT_120			before_TSS	19	95	20	0.2	73.35	37.017	0	0	GO:0031497 chromatin assembly
132	MIT_120			before_TSS	19	78	24.3	0.2	89.33	40.924	0	0	GO:0000786
133	MIT_120			before_TSS	19	188	10.1	0.2	37.06	26.059	0	0	GO:0006323 DNA packaging
134	MIT_120			before_TSS	19	208	9.1	0.2	33.5	24.722	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
135	MIT_120			before_TSS	19	121	15.7	0.2	57.59	32.711	0	0	GO:0006333 chromatin assembly or disassembly
136	MIT_120			after_TSS	15	78	19.2	0.2	72.73	32.723	0	0	GO:0000786
137	MIT_120			after_TSS	15	179	8.3	0.2	31.69	21.301	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
138	MIT_120			after_TSS	15	220	6.8	0.2	25.78	19.103	0	0	GO:0051276 chromosome organization and biogenesis
139	MIT_120			after_TSS	15	208	7.2	0.2	27.27	19.68	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
140	MIT_120			after_TSS	15	121	12.3	0.2	46.88	26.118	0	0	GO:0006333 chromatin assembly or disassembly
141	MIT_120			after_TSS	15	188	7.9	0.2	30.17	20.758	0	0	GO:0006323 DNA packaging
142	MIT_120			after_TSS	15	123	12.1	0.2	46.12	25.897	0	0	GO:0006461 protein complex assembly
143	MIT_120			after_TSS	15	95	15.7	0.2	59.71	29.582	0	0	GO:0031497 chromatin assembly
144	MIT_120			after_TSS	15	86	17.4	0.2	65.96	31.13	0	0	GO:0006334 nucleosome assembly
145	MIT_120			before_TSS	14	88	15.9	0.2	58.34	28.231	0	0	GO:0005694
146	MIT_120			after_TSS	12	88	13.6	0.2	51.57	24.516	0	0	GO:0005694
147	MIT_140			before_TSS	16	220	7.2	2.6	2.7	4.233	0	0.0129	GO:0051276 chromosome organization and biogenesis
148	MIT_140			before_TSS	15	208	7.2	2.6	2.67	4.059	0	0.0231	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
149	MIT_140			before_TSS	13	179	7.2	2.6	2.69	3.803	0.0001	0.0582	GO:0006325 establishment and/or maintenance of chromatin architecture
150	MIT_140			before_TSS	12	88	13.6	2.6	5.06	6.363	0	0	GO:0005694
151	MIT_140			before_TSS	12	123	9.7	2.6	3.62	4.862	0	0.0006	GO:0006461 protein complex assembly
152	MIT_140			before_TSS	11	95	11.5	2.6	4.29	5.37	0	0	GO:0031497 chromatin assembly
153	MIT_140			before_TSS	11	78	14.1	2.6	5.23	6.243	0	0	GO:0000786
154	MIT_140			before_TSS	11	121	9	2.6	3.37	4.368	0	0.0049	GO:0006333 chromatin assembly or disassembly
155	MIT_140			before_TSS	11	86	12.7	2.6	4.74	5.804	0	0	GO:0006334 nucleosome assembly
156	MIT_165			before_TSS	15	95	15.7	0.5	29.85	20.589	0	0	GO:0031497 chromatin assembly
157	MIT_165			before_TSS	15	188	7.9	0.5	15.08	14.194	0	0	GO:0006323 DNA packaging
158	MIT_165			before_TSS	15	121	12.3	0.5	23.44	18.089	0	0	GO:0006333 chromatin assembly or disassembly
159	MIT_165			before_TSS	15	208	7.2	0.5	13.63	13.404	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
160	MIT_165			before_TSS	15	220	6.8	0.5	12.89	12.98	0	0	GO:0051276 chromosome organization and biogenesis
161	MIT_165			before_TSS	15	78	19.2	0.5	36.36	22.846	0	0	GO:0000786
162	MIT_165			before_TSS	15	179	8.3	0.5	15.84	14.59	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
163	MIT_165			before_TSS	15	123	12.1	0.5	23.06	17.93	0	0	GO:0006461 protein complex assembly
164	MIT_165			before_TSS	15	86	17.4	0.5	32.98	21.702	0	0	GO:0006334 nucleosome assembly
165	MIT_165			before_TSS	13	88	14.7	0.5	27.93	18.49	0	0	GO:0005694
166	MIT_169			before_TSS	19	188	10.1	0.5	19.11	18.248	0	0	GO:0006323 DNA packaging
167	MIT_169			before_TSS	19	208	9.1	0.5	17.27	17.261	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
168	MIT_169			before_TSS	19	220	8.6	0.5	16.33	16.733	0	0	GO:0051276 chromosome organization and biogenesis
169	MIT_169			before_TSS	19	179	10.6	0.5	20.07	18.743	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
170	MIT_169			before_TSS	19	121	15.7	0.5	29.69	23.128	0	0	GO:0006333 chromatin assembly or disassembly
171	MIT_169			before_TSS	19	123	15.4	0.5	29.21	22.928	0	0	GO:0006461 protein complex assembly
172	MIT_169			before_TSS	18	86	20.9	0.5	39.58	26.178	0	0	GO:0006334 nucleosome assembly
173	MIT_169			before_TSS	18	95	18.9	0.5	35.83	24.849	0	0	GO:0031497 chromatin assembly
174	MIT_169			before_TSS	18	78	23	0.5	43.64	27.545	0	0	GO:0000786
175	MIT_169			after_TSS	15	220	6.8	0.3	18.33	15.854	0	0	GO:0051276 chromosome organization and biogenesis
176	MIT_169			after_TSS	15	208	7.2	0.3	19.39	16.348	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
177	MIT_169			after_TSS	14	188	7.4	0.3	20.02	16.063	0	0	GO:0006323 DNA packaging
178	MIT_169			after_TSS	14	86	16.2	0.3	43.78	24.323	0	0	GO:0006334 nucleosome assembly
179	MIT_169			after_TSS	14	179	7.8	0.3	21.03	16.497	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
180	MIT_169			after_TSS	14	121	11.5	0.3	31.11	20.34	0	0	GO:0006333 chromatin assembly or disassembly
181	MIT_169			after_TSS	14	78	17.9	0.3	48.27	25.587	0	0	GO:0000786
182	MIT_169			after_TSS	14	123	11.3	0.3	30.61	20.165	0	0	GO:0006461 protein complex assembly
183	MIT_169			after_TSS	14	95	14.7	0.3	39.63	23.094	0	0	GO:0031497 chromatin assembly
184	MIT_169			before_TSS	13	88	14.7	0.5	27.93	18.49	0	0	GO:0005694
185	MIT_169			after_TSS	12	88	13.6	0.3	36.67	20.518	0	0	GO:0005694
186	TF_AHR			after_TSS	68	547	12.4	5.4	2.27	7.341	0	0	GO:0005739
187	TF_AHR			after_TSS	52	427	12.1	5.4	2.22	6.218	0	0	GO:0006259 DNA metabolism
188	TF_AHR			before_TSS	50	427	11.7	6.5	1.79	4.423	0	0.01	GO:0006259 DNA metabolism
189	TF_AHR			after_TSS	36	208	17.3	5.4	3.16	7.584	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
190	TF_AHR			after_TSS	36	220	16.3	5.4	2.99	7.181	0	0	GO:0051276 chromosome organization and biogenesis
191	TF_AHR			after_TSS	36	188	19.1	5.4	3.5	8.323	0	0	GO:0006323 DNA packaging
192	TF_AHR			after_TSS	35	179	19.5	5.4	3.58	8.358	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
193	TF_AHR			before_TSS	35	220	15.9	6.5	2.44	5.693	0	0	GO:0051276 chromosome organization and biogenesis
194	TF_AHR			before_TSS	35	208	16.8	6.5	2.58	6.074	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
195	TF_AHR			before_TSS	32	179	17.8	6.5	2.74	6.201	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
196	TF_AHR			before_TSS	32	188	17	6.5	2.61	5.878	0	0	GO:0006323 DNA packaging
197	TF_AHR			after_TSS	30	121	24.7	5.4	4.53	9.405	0	0	GO:0006333 chromatin assembly or disassembly
198	TF_AHR			after_TSS	29	123	23.5	5.4	4.31	8.886	0	0	GO:0006461 protein complex assembly
199	TF_AHR			before_TSS	29	123	23.5	6.5	3.61	7.702	0	0	GO:0006461 protein complex assembly
200	TF_AHR			after_TSS	27	95	28.4	5.4	5.2	9.886	0	0	GO:0031497 chromatin assembly
201	TF_AHR			after_TSS	27	86	31.3	5.4	5.74	10.621	0	0	GO:0006334 nucleosome assembly
202	TF_AHR			before_TSS	27	121	22.3	6.5	3.42	7.073	0	0	GO:0006333 chromatin assembly or disassembly
203	TF_AHR			before_TSS	26	86	30.2	6.5	4.63	8.939	0	0	GO:0006334 nucleosome assembly
204	TF_AHR			before_TSS	26	95	27.3	6.5	4.19	8.264	0	0	GO:0031497 chromatin assembly
205	TF_AHR			before_TSS	26	78	33.3	6.5	5.11	9.623	0	0	GO:0000786
206	TF_AHR			after_TSS	26	78	33.3	5.4	6.1	10.867	0	0	GO:0000786
207	TF_AHR			after_TSS	26	181	14.3	5.4	2.63	5.311	0	0.0023	GO:0051186 cofactor metabolism
208	TF_AHR			after_TSS	25	159	15.7	5.4	2.87	5.732	0	0.0002	GO:0006732 coenzyme metabolism
209	TF_AHR	yes		after_TSS	22	427	5.1	1.3	3.84	6.981	0	0	GO:0006259 DNA metabolism
210	TF_AHR			after_TSS	20	88	22.7	5.4	4.16	7.153	0	0	GO:0005694
211	TF_AHR	yes		after_TSS	18	220	8.1	1.3	6.11	8.913	0	0	GO:0051276 chromosome organization and biogenesis
212	TF_AHR	yes		after_TSS	18	188	9.5	1.3	7.15	9.903	0	0	GO:0006323 DNA packaging
213	TF_AHR	yes		after_TSS	18	121	14.8	1.3	11.11	13.022	0	0	GO:0006333 chromatin assembly or disassembly
214	TF_AHR	yes		after_TSS	18	179	10	1.3	7.51	10.224	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
215	TF_AHR			before_TSS	18	88	20.4	6.5	3.13	5.314	0	0	GO:0005694
216	TF_AHR	yes		after_TSS	18	208	8.6	1.3	6.46	9.26	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
217	TF_AHR	yes		after_TSS	17	123	13.8	1.3	10.32	12.108	0	0	GO:0006461 protein complex assembly
218	TF_AHR	yes		after_TSS	16	78	20.5	1.3	15.32	14.783	0	0	GO:0000786
219	TF_AHR	yes		before_TSS	16	220	7.2	1.3	5.2	7.496	0	0	GO:0051276 chromosome organization and biogenesis
220	TF_AHR	yes		before_TSS	16	208	7.6	1.3	5.5	7.805	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
221	TF_AHR	yes		after_TSS	16	86	18.6	1.3	13.89	13.982	0	0	GO:0006334 nucleosome assembly
222	TF_AHR	yes		after_TSS	16	95	16.8	1.3	12.58	13.2	0	0	GO:0031497 chromatin assembly
223	TF_AHR	yes		before_TSS	15	179	8.3	1.3	6	8.021	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
224	TF_AHR	yes		before_TSS	15	188	7.9	1.3	5.71	7.751	0	0	GO:0006323 DNA packaging
225	TF_AHR	yes		before_TSS	14	123	11.3	1.3	8.15	9.486	0	0	GO:0006461 protein complex assembly
226	TF_AHR	yes		before_TSS	12	78	15.3	1.3	11.01	10.562	0	0	GO:0000786
227	TF_AHR	yes		before_TSS	12	86	13.9	1.3	9.99	9.959	0	0	GO:0006334 nucleosome assembly
228	TF_AHR	yes		before_TSS	12	95	12.6	1.3	9.04	9.369	0	0	GO:0031497 chromatin assembly
229	TF_AHR	yes		before_TSS	12	121	9.9	1.3	7.1	8.027	0	0	GO:0006333 chromatin assembly or disassembly
230	TF_AHR	yes	yes	after_TSS	11	88	12.5	0.2	52.16	23.609	0	0	GO:0005694
231	TF_AHR	yes		before_TSS	10	88	11.3	1.3	8.13	7.997	0	0	GO:0005694
232	TF_AML			after_TSS	13	205	6.3	2	3.15	4.461	0	0.0881	GO:0044262 cellular carbohydrate metabolism
233	TF_AP2			before_TSS	11	88	12.5	4	3.11	4.076	0	0.0178	GO:0005694
234	TF_AP2		yes	after_TSS	11	208	5.2	1.3	3.97	5.025	0	0.0007	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
235	TF_AP2		yes	after_TSS	11	179	6.1	1.3	4.61	5.664	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
236	TF_AP2		yes	after_TSS	11	220	5	1.3	3.75	4.794	0	0.0023	GO:0051276 chromosome organization and biogenesis
237	TF_AP2		yes	after_TSS	11	188	5.8	1.3	4.39	5.452	0	0	GO:0006323 DNA packaging
238	TF_AP2			before_TSS	11	86	12.7	4	3.19	4.167	0	0.0103	GO:0006334 nucleosome assembly
239	TF_AP2			before_TSS	11	95	11.5	4	2.88	3.777	0.0001	0.0504	GO:0031497 chromatin assembly
240	TF_AP2			before_TSS	10	78	12.8	4	3.19	3.981	0	0.0247	GO:0000786
241	TF_AP2		yes	after_TSS	10	123	8.1	1.3	6.11	6.615	0	0	GO:0006461 protein complex assembly
242	TF_AP2A			after_TSS	24	181	13.2	5.8	2.26	4.287	0	0.0652	GO:0051186 cofactor metabolism
243	TF_AP2A			after_TSS	22	159	13.8	5.8	2.36	4.326	0	0.0656	GO:0006732 coenzyme metabolism
244	TF_ARNT			after_TSS	57