CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of ADD_MAF

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
ADD_MAF
ADD_MAF alone
In pair
with
1GO:0050896 response to stimulus
1020
at_TSS
52
yes
 
2GO:0006950 response to stress
546
at_TSS,after_TSS
50
yes
 
3GO:0050874 organismal physiological process
881
at_TSS
47
yes
 
4GO:0009605 response to external stimulus
489
at_TSS,after_TSS
45
yes
 
5GO:0001584 rhodopsin-like receptor activity
283
after_TSS
27
yes
 
6GO:0009607 response to biotic stimulus
483
at_TSS
25
yes
 
7GO:0043207 response to external biotic stimulus
237
at_TSS,after_TSS
23
yes
 
8GO:0006325 establishment and/or maintenance of chromatin architecture
179
after_TSS
22
yes
 
9GO:0006323 DNA packaging
188
after_TSS
22
yes
 
10GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
208
after_TSS
22
yes
 
11GO:0006955 immune response
379
at_TSS
21
yes
 
12GO:0006333 chromatin assembly or disassembly
121
after_TSS
19
yes
 
13GO:0031497 chromatin assembly
95
after_TSS
17
yes
 
14GO:0006461 protein complex assembly
123
after_TSS
17
yes
 
15GO:0051276 chromosome organization and biogenesis
220
after_TSS
17
yes
 
16GO:0006334 nucleosome assembly
86
after_TSS
16
yes
 
17GO:0009613 response to pest, pathogen or parasite
221
at_TSS
15
yes
 
18GO:0030246 carbohydrate binding
208
at_TSS
14
yes
 
19GO:0016789 carboxylic ester hydrolase activity
80
after_TSS
14
yes
 

Details on Gene Ontology terms for targets of ADD_MAF

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
at_TSS
52
1020
5
3.3
1.53
3.308
0.0009
0.0132
GO:0050896 response to stimulus
2none
 
 
after_TSS
50
546
9.1
5.9
1.53
3.233
0.0012
0.0747
GO:0006950 response to stress
3none
 
 
at_TSS
47
881
5.3
3.3
1.6
3.463
0.0005
0.0102
GO:0050874 organismal physiological process
4none
 
 
after_TSS
45
489
9.2
5.9
1.54
3.094
0.0019
0.0124
GO:0009605 response to external stimulus
5none
 
 
at_TSS
31
546
5.6
3.3
1.7
3.143
0.0016
0.0408
GO:0006950 response to stress
6none
 
 
at_TSS
29
489
5.9
3.3
1.78
3.286
0.001
0.0109
GO:0009605 response to external stimulus
7none
 
 
after_TSS
27
283
9.5
5.9
1.6
2.577
0.0099
0.0911
GO:0001584 rhodopsin-like receptor activity
8none
 
 
at_TSS
25
483
5.1
3.3
1.55
2.321
0.0202
0.0916
GO:0009607 response to biotic stimulus
9none
 
 
after_TSS
23
237
9.7
5.9
1.62
2.461
0.0138
0.0831
GO:0043207 response to external biotic stimulus
10none
 
 
after_TSS
22
179
12.2
5.9
2.06
3.606
0.0003
0.0066
GO:0006325 establishment and/or maintenance of chromatin architecture
11none
 
 
after_TSS
22
208
10.5
5.9
1.77
2.839
0.0045
0.0662
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
12none
 
 
after_TSS
22
188
11.7
5.9
1.96
3.353
0.0007
0.0162
GO:0006323 DNA packaging
13none
 
 
at_TSS
21
379
5.5
3.3
1.66
2.449
0.0143
0.0903
GO:0006955 immune response
14none
 
 
after_TSS
19
121
15.7
5.9
2.63
4.551
0
0.0001
GO:0006333 chromatin assembly or disassembly
15none
 
 
after_TSS
17
123
13.8
5.9
2.32
3.703
0.0002
0.0041
GO:0006461 protein complex assembly
16none
 
yes
after_TSS
17
220
7.7
2.1
3.66
5.857
0
0
GO:0051276 chromosome organization and biogenesis
17none
 
 
after_TSS
17
95
17.8
5.9
3
4.934
0
0
GO:0031497 chromatin assembly
18none
 
 
after_TSS
16
86
18.6
5.9
3.12
4.972
0
0
GO:0006334 nucleosome assembly
19none
 
 
at_TSS
15
237
6.3
3.3
1.9
2.609
0.009
0.0738
GO:0043207 response to external biotic stimulus
20none
 
 
after_TSS
15
78
19.2
5.9
3.22
4.968
0
0
GO:0000786
21none
 
 
at_TSS
15
221
6.7
3.3
2.04
2.901
0.0037
0.0388
GO:0009613 response to pest, pathogen or parasite
22none
 
 
after_TSS
14
80
17.5
5.9
2.93
4.376
0
0.0044
GO:0016789 carboxylic ester hydrolase activity
23none
 
 
after_TSS
14
88
15.9
5.9
2.67
3.958
0
0.0014
GO:0005694
24none
 
 
at_TSS
14
208
6.7
3.3
2.02
2.767
0.0056
0.0941
GO:0030246 carbohydrate binding
25none
 
yes
after_TSS
12
157
7.6
2.1
3.62
4.861
0
0.0004
GO:0005829