CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of ADD_MEF3

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
ADD_MEF3
ADD_MEF3 alone
In pair
with
1GO:0008270 zinc ion binding
901
before_TSS
57
yes
 
2GO:0009653 morphogenesis
811
before_TSS
52
yes
 
3GO:0030528 transcription regulator activity
941
at_TSS
48
yes
 
4GO:0009887 organ morphogenesis
674
before_TSS
46
yes
 
5GO:0030154 cell differentiation
538
before_TSS
42
yes
 
6GO:0003700 transcription factor activity
719
at_TSS
38
yes
 
7GO:0007399 nervous system development
301
after_TSS
30
yes
 
8GO:0006399 tRNA metabolism
86
at_TSS
19
yes
 
9GO:0006366 transcription from RNA polymerase II promoter
231
before_TSS
19
yes
 
10GO:0007610 behavior
229
before_TSS
18
yes
 
11GO:0006357 regulation of transcription from RNA polymerase II promoter
191
before_TSS
17
yes
 
12GO:0006928 cell motility
162
before_TSS
16
yes
 
13GO:0040011 locomotion
165
before_TSS
16
yes
 
14GO:0007626 locomotory behavior
187
before_TSS
16
yes
 
15GO:0048468 cell development
162
before_TSS
15
yes
 
16GO:0016477 cell migration
141
before_TSS
14
yes
 
17GO:0009064 glutamine family amino acid metabolism
26
after_TSS
13
yes
 
18GO:0016758 transferase activity, transferring hexosyl groups
109
before_TSS
13
yes
 
19GO:0006334 nucleosome assembly
86
after_TSS
12
yes
 
20GO:0007389 pattern specification
128
at_TSS,before_TSS
11
yes
 

Details on Gene Ontology terms for targets of ADD_MEF3

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
yes
before_TSS
57
901
6.3
4.1
1.51
3.36
0.0007
0.0316
GO:0008270 zinc ion binding
2none
 
yes
before_TSS
52
811
6.4
4.1
1.53
3.301
0.0009
0.0043
GO:0009653 morphogenesis
3none
 
yes
at_TSS
48
941
5.1
2.9
1.72
4.04
0
0.0004
GO:0030528 transcription regulator activity
4none
 
yes
before_TSS
46
674
6.8
4.1
1.63
3.543
0.0003
0.0021
GO:0009887 organ morphogenesis
5none
 
yes
before_TSS
42
538
7.8
4.1
1.87
4.312
0
0.0005
GO:0030154 cell differentiation
6none
 
yes
at_TSS
38
719
5.2
2.9
1.78
3.797
0.0001
0.0011
GO:0003700 transcription factor activity
7none
 
yes
after_TSS
30
301
9.9
6.1
1.63
2.832
0.0046
0.0529
GO:0007399 nervous system development
8none
 
yes
before_TSS
20
302
6.6
4.1
1.58
2.156
0.031
0.0888
GO:0005667
9none
 
yes
before_TSS
19
231
8.2
4.1
1.97
3.11
0.0018
0.0456
GO:0006366 transcription from RNA polymerase II promoter
10none
 
 
at_TSS
19
86
22
10.3
2.13
3.59
0.0003
0.011
GO:0006399 tRNA metabolism
11none
 
yes
before_TSS
18
229
7.8
4.1
1.88
2.817
0.0048
0.0554
GO:0007610 behavior
12none
 
yes
before_TSS
17
191
8.9
4.1
2.13
3.293
0.0009
0.0403
GO:0006357 regulation of transcription from RNA polymerase II promoter
13none
 
yes
before_TSS
16
162
9.8
4.1
2.36
3.655
0.0002
0.0104
GO:0006928 cell motility
14none
 
yes
before_TSS
16
187
8.5
4.1
2.05
3.021
0.0025
0.0461
GO:0007626 locomotory behavior
15none
 
yes
before_TSS
16
165
9.6
4.1
2.32
3.573
0.0003
0.0129
GO:0040011 locomotion
16none
 
yes
at_TSS
16
302
5.2
2.9
1.79
2.43
0.015
0.0812
GO:0005667
17none
 
yes
before_TSS
15
162
9.2
4.1
2.21
3.259
0.0011
0.0215
GO:0048468 cell development
18none
 
yes
before_TSS
14
141
9.9
4.1
2.37
3.438
0.0005
0.0357
GO:0016477 cell migration
19none
 
yes
after_TSS
13
88
14.7
6.1
2.41
3.407
0.0006
0.024
GO:0005694
20none
yes
 
before_TSS
13
109
11.9
4.6
2.57
3.644
0.0002
0.0982
GO:0016758 transferase activity, transferring hexosyl groups
21none
 
 
after_TSS
13
26
50
20.5
2.43
3.723
0.0001
0.072
GO:0009064 glutamine family amino acid metabolism
22none
 
yes
after_TSS
12
86
13.9
6.1
2.28
3.05
0.0022
0.0492
GO:0006334 nucleosome assembly
23none
 
yes
before_TSS
11
128
8.5
4.1
2.05
2.514
0.0119
0.0642
GO:0007389 pattern specification
24none
 
yes
at_TSS
10
128
7.8
2.9
2.64
3.258
0.0011
0.0256
GO:0007389 pattern specification