CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_AP2REP

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_AP2REP
TF_AP2REP alone
In pair
with
1GO:0003700 transcription factor activity
719
before_TSS
36
yes
 
2GO:0016192 vesicle-mediated transport
228
before_TSS
13
 
TF_GATA,
3GO:0016835 carbon-oxygen lyase activity
52
at_TSS
11
yes
 
4GO:0008083 growth factor activity
121
after_TSS
11
yes
 
5GO:0030323 respiratory tube development
25
before_TSS
10
yes
 
6GO:0016836 hydro-lyase activity
44
at_TSS
10
yes
 
7GO:0030324 lung development
24
before_TSS
10
yes
 

Pairs of TF_AP2REP binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_GATA
before_TSS
1
GO:0016192 vesicle-mediated transport
13
228

Details on Gene Ontology terms for targets of TF_AP2REP

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
yes
before_TSS
36
719
5
2.5
1.94
4.237
0
0.0001
GO:0003700 transcription factor activity
2none
 
 
at_TSS
11
52
21.1
6.1
3.43
4.504
0
0.0024
GO:0016835 carbon-oxygen lyase activity
3none
 
yes
after_TSS
11
121
9
2.9
3.08
4.012
0
0.011
GO:0008083 growth factor activity
4none
 
 
at_TSS
10
44
22.7
6.1
3.68
4.576
0
0.0017
GO:0016836 hydro-lyase activity
5none
 
 
before_TSS
10
25
40
15.6
2.55
3.354
0.0007
0.0728
GO:0030323 respiratory tube development
6none
 
 
before_TSS
10
24
41.6
15.6
2.66
3.511
0.0004
0.0816
GO:0030324 lung development
7TF_GATA
 
 
before_TSS
13
228
5.7
0.9
5.84
7.332
0
0
GO:0016192 vesicle-mediated transport