CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_CDC5

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_CDC5
TF_CDC5 alone
In pair
with
1GO:0009605 response to external stimulus
489
after_TSS
49
yes
 
2GO:0009653 morphogenesis
811
before_TSS
45
yes
 
3GO:0048513 organ development
852
before_TSS
43
yes
 
4GO:0009887 organ morphogenesis
674
before_TSS
39
yes
 
5GO:0006082 organic acid metabolism
350
before_TSS
39
 
MIT_060FOXO,
6GO:0019752 carboxylic acid metabolism
350
before_TSS
39
 
MIT_060FOXO,
7GO:0004857 enzyme inhibitor activity
155
after_TSS
21
yes
 
8GO:0031072 heat shock protein binding
45
before_TSS
21
yes
 
9GO:0006955 immune response
379
at_TSS
20
yes
 
10GO:0004866 endopeptidase inhibitor activity
112
after_TSS
16
yes
 
11GO:0030414 protease inhibitor activity
112
after_TSS
16
yes
 
12GO:0005179 hormone activity
97
after_TSS
15
yes
 
13GO:0004867 serine-type endopeptidase inhibitor activity
77
after_TSS
14
yes
 
14GO:0006281 DNA repair
133
before_TSS
13
 
TF_IRF, TF_AML,
15GO:0005529 sugar binding
144
before_TSS
13
 
many
16GO:0009888 histogenesis
112
before_TSS
12
yes
 
17GO:0030246 carbohydrate binding
208
before_TSS
11
 
TF_CDX,
18GO:0003735 structural constituent of ribosome
172
at_TSS,before_TSS
11
yes
TF_STAF,
19GO:0007389 pattern specification
128
before_TSS
11
yes
 
20GO:0006457 protein folding
163
at_TSS
11
yes
 
21GO:0007156 homophilic cell adhesion
76
before_TSS
10
 
MIT_051TATA,

Pairs of TF_CDC5 binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1MIT_060FOXO
before_TSS
2
GO:0019752 carboxylic acid metabolism
39
350
2TF_STAF
before_TSS
1
GO:0003735 structural constituent of ribosome
10
172
3MIT_051TATA
before_TSS
1
GO:0007156 homophilic cell adhesion
10
76
4TF_IRF
before_TSS
1
GO:0006281 DNA repair
13
133
5TF_BRN
before_TSS
1
GO:0005529 sugar binding
12
144
6TF_CLOX
before_TSS
1
GO:0005529 sugar binding
13
144
7TF_TST
before_TSS
1
GO:0005529 sugar binding
12
144
8TF_CDX
before_TSS
1
GO:0030246 carbohydrate binding
11
208
9TF_AML
before_TSS
1
GO:0006281 DNA repair
12
133
10TF_CART
before_TSS
1
GO:0005529 sugar binding
13
144

Details on Gene Ontology terms for targets of TF_CDC5

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
after_TSS
49
489
10
6.1
1.62
3.599
0.0003
0.0029
GO:0009605 response to external stimulus
2none
 
yes
before_TSS
45
811
5.5
2.8
1.91
4.674
0
0
GO:0009653 morphogenesis
3none
 
yes
before_TSS
43
852
5
2.8
1.74
3.893
0
0.0006
GO:0048513 organ development
4none
 
yes
before_TSS
39
674
5.7
2.8
2
4.614
0
0
GO:0009887 organ morphogenesis
5none
 
 
after_TSS
21
155
13.5
6.1
2.19
3.833
0.0001
0.0066
GO:0004857 enzyme inhibitor activity
6none
 
 
before_TSS
21
45
46.6
23.2
2
3.725
0.0001
0.0714
GO:0031072 heat shock protein binding
7none
 
 
at_TSS
20
379
5.2
2.8
1.86
2.911
0.0036
0.0306
GO:0006955 immune response
8none
 
yes
before_TSS
18
302
5.9
2.8
2.06
3.222
0.0012
0.006
GO:0005667
9none
 
 
after_TSS
16
112
14.2
6.1
2.31
3.578
0.0003
0.0115
GO:0004866 endopeptidase inhibitor activity
10none
 
 
after_TSS
16
112
14.2
6.1
2.31
3.578
0.0003
0.0115
GO:0030414 protease inhibitor activity
11none
 
 
after_TSS
15
97
15.4
6.1
2.5
3.812
0.0001
0.005
GO:0005179 hormone activity
12none
 
 
after_TSS
14
77
18.1
6.1
2.94
4.387
0
0.0042
GO:0004867 serine-type endopeptidase inhibitor activity
13none
 
yes
before_TSS
12
112
10.7
2.8
3.7
4.962
0
0.0002
GO:0009888 histogenesis
14none
 
 
at_TSS
11
163
6.7
2.8
2.38
3.032
0.0024
0.0404
GO:0006457 protein folding
15none
 
yes
before_TSS
11
128
8.5
2.8
2.97
3.869
0.0001
0.0012
GO:0007389 pattern specification
16none
 
 
at_TSS
11
172
6.3
2.8
2.25
2.834
0.0045
0.0701
GO:0003735 structural constituent of ribosome
17MIT_051TATA
 
 
before_TSS
10
76
13.1
3.4
3.79
4.628
0
0.0398
GO:0007156 homophilic cell adhesion
18MIT_060FOXO
 
 
before_TSS
39
350
11.1
5.6
1.96
4.504
0
0.0261
GO:0019752 carboxylic acid metabolism
19MIT_060FOXO
 
 
before_TSS
39
350
11.1
5.6
1.96
4.504
0
0.0261
GO:0006082 organic acid metabolism
20TF_AML
 
 
before_TSS
12
133
9
2.6
3.39
4.584
0
0.0657
GO:0006281 DNA repair
21TF_BRN
 
 
before_TSS
12
144
8.3
2.6
3.16
4.293
0
0.0317
GO:0005529 sugar binding
22TF_CART
 
 
before_TSS
13
144
9
3.2
2.78
3.947
0
0.09
GO:0005529 sugar binding
23TF_CDX
 
 
before_TSS
11
208
5.2
1.5
3.35
4.33
0
0.0585
GO:0030246 carbohydrate binding
24TF_CLOX
 
 
before_TSS
13
144
9
2.6
3.35
4.723
0
0.0071
GO:0005529 sugar binding
25TF_IRF
 
 
before_TSS
13
133
9.7
2.7
3.61
5.058
0
0.0091
GO:0006281 DNA repair
26TF_STAF
 
 
before_TSS
10
172
5.8
1.5
3.78
4.592
0
0.0474
GO:0003735 structural constituent of ribosome
27TF_TST
 
 
before_TSS
12
144
8.3
2.5
3.27
4.437
0
0.0197
GO:0005529 sugar binding