CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_CEBP

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_CEBP
TF_CEBP alone
In pair
with
1GO:0003677 DNA binding
1509
before_TSS
115
yes
 
2GO:0006350 transcription
1461
before_TSS
108
yes
 
3GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
1420
before_TSS
107
yes
 
4GO:0045449 regulation of transcription
1410
before_TSS
107
yes
 
5GO:0006351 transcription, DNA-dependent
1383
before_TSS
106
yes
 
6GO:0006355 regulation of transcription, DNA-dependent
1362
before_TSS
104
yes
 
7GO:0007275 development
1378
before_TSS
100
yes
 
8GO:0030528 transcription regulator activity
941
at_TSS,before_TSS
86
yes
 
9GO:0048513 organ development
852
before_TSS
66
yes
 
10GO:0009653 morphogenesis
811
before_TSS
65
yes
 
11GO:0003700 transcription factor activity
719
at_TSS,before_TSS
63
yes
 
12GO:0006259 DNA metabolism
427
at_TSS
62
yes
TF_NFY,
13GO:0009887 organ morphogenesis
674
before_TSS
56
yes
 
14GO:0030154 cell differentiation
538
before_TSS
45
yes
 
15GO:0051276 chromosome organization and biogenesis
220
at_TSS,before_TSS
37
yes
many
16GO:0043207 response to external biotic stimulus
237
at_TSS
37
yes
 
17GO:0006323 DNA packaging
188
at_TSS,before_TSS
36
yes
many
18GO:0009613 response to pest, pathogen or parasite
221
at_TSS
35
yes
 
19GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
208
at_TSS,before_TSS
35
yes
TF_LHX, MIT_046, TF_NFY,
20GO:0006325 establishment and/or maintenance of chromatin architecture
179
at_TSS,before_TSS
33
yes
many
21GO:0048519 negative regulation of biological process
408
before_TSS
31
yes
 
22GO:0048523 negative regulation of cellular process
375
before_TSS
30
yes
 
23GO:0006333 chromatin assembly or disassembly
121
at_TSS,before_TSS
28
yes
many
24GO:0051243 negative regulation of cellular physiological process
330
before_TSS
27
yes
 
25GO:0043118 negative regulation of physiological process
342
before_TSS
27
yes
 
26GO:0006461 protein complex assembly
123
at_TSS
27
yes
many
27GO:0007399 nervous system development
301
before_TSS
27
yes
 
28GO:0031497 chromatin assembly
95
at_TSS
26
yes
many
29GO:0006334 nucleosome assembly
86
at_TSS
26
yes
many
30GO:0000902 cellular morphogenesis
238
before_TSS
24
yes
 
31GO:0006886 intracellular protein transport
350
at_TSS
23
 
TF_NFY,
32GO:0005179 hormone activity
97
after_TSS
23
yes
 
33GO:0006366 transcription from RNA polymerase II promoter
231
before_TSS
22
yes
 
34GO:0004518 nuclease activity
108
at_TSS
20
yes
 
35GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
91
at_TSS
20
yes
 
36GO:0048468 cell development
162
before_TSS
19
yes
 
37GO:0004497 monooxygenase activity
90
at_TSS
19
yes
 
38GO:0006357 regulation of transcription from RNA polymerase II promoter
191
before_TSS
19
yes
 
39GO:0030182 neuron differentiation
137
before_TSS
18
yes
 
40GO:0007067 mitosis
88
at_TSS
17
yes
TF_SP1, MIT_006SP1,
41GO:0000087 M phase of mitotic cell cycle
89
at_TSS
17
yes
TF_SP1, MIT_006SP1,
42GO:0000904 cellular morphogenesis during differentiation
107
before_TSS
16
yes
 
43GO:0031175 neurite morphogenesis
96
before_TSS
14
yes
 
44GO:0048667 neuron morphogensis during differentiation
96
before_TSS
14
yes
 
45GO:0048666 neuron development
108
before_TSS
14
yes
 
46GO:0000279 M phase
122
at_TSS
14
yes
 
47GO:0007389 pattern specification
128
before_TSS
13
yes
 
48GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
121
before_TSS
13
yes
 
49GO:0016481 negative regulation of transcription
115
before_TSS
13
yes
 
50GO:0031324 negative regulation of cellular metabolism
132
before_TSS
13
yes
 
51GO:0007409 axonogenesis
81
before_TSS
12
yes
 
52GO:0007417 central nervous system development
76
before_TSS
11
yes
 
53GO:0004527 exonuclease activity
39
at_TSS
11
yes
 
54GO:0045892 negative regulation of transcription, DNA-dependent
82
before_TSS
10
yes
 
55GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
33
at_TSS
10
yes
 
56GO:0007420 brain development
63
before_TSS
10
yes
 

Pairs of TF_CEBP binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_NFY
at_TSS
10
GO:0006259 DNA metabolism
40
427
2MIT_046
at_TSS
8
GO:0051276 chromosome organization and biogenesis
12
220
3TF_POU3F
at_TSS
6
GO:0006334 nucleosome assembly
10
86
4MIT_006SP1
at_TSS,before_TSS
5
GO:0051276 chromosome organization and biogenesis
13
220
5MIT_051TATA
at_TSS
3
GO:0006323 DNA packaging
10
188
6MIT_005NFY
at_TSS
3
GO:0006334 nucleosome assembly
11
86
7TF_LHX
before_TSS
2
GO:0051276 chromosome organization and biogenesis
17
220
8TF_SP1
at_TSS
2
GO:0000087 M phase of mitotic cell cycle
11
89
9TF_PBX
at_TSS
2
GO:0006323 DNA packaging
10
188
10TF_OCT
at_TSS
1
GO:0006323 DNA packaging
10
188
11TF_CREB
at_TSS
1
GO:0006461 protein complex assembly
10
123

Details on Gene Ontology terms for targets of TF_CEBP

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
yes
before_TSS
115
1509
7.6
4.8
1.57
5.396
0
0
GO:0003677 DNA binding
2none
 
yes
before_TSS
108
1461
7.3
4.8
1.52
4.862
0
0
GO:0006350 transcription
3none
 
yes
before_TSS
107
1410
7.5
4.8
1.57
5.131
0
0
GO:0045449 regulation of transcription
4none
 
yes
before_TSS
107
1420
7.5
4.8
1.55
5.052
0
0
GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
5none
 
yes
before_TSS
106
1383
7.6
4.8
1.58
5.215
0
0
GO:0006351 transcription, DNA-dependent
6none
 
yes
before_TSS
104
1362
7.6
4.8
1.57
5.118
0
0
GO:0006355 regulation of transcription, DNA-dependent
7none
 
yes
before_TSS
100
1378
7.2
4.8
1.5
4.455
0
0
GO:0007275 development
8none
 
yes
before_TSS
86
941
9.1
4.8
1.89
6.412
0
0
GO:0030528 transcription regulator activity
9none
 
yes
before_TSS
66
852
7.7
4.8
1.6
4.111
0
0.0003
GO:0048513 organ development
10none
 
yes
before_TSS
65
811
8
4.8
1.65
4.373
0
0.0001
GO:0009653 morphogenesis
11none
 
yes
before_TSS
63
719
8.7
4.8
1.81
5.064
0
0
GO:0003700 transcription factor activity
12none
 
 
at_TSS
62
427
14.5
9.6
1.5
3.476
0.0005
0.0084
GO:0006259 DNA metabolism
13none
 
 
after_TSS
61
356
17.1
9.3
1.83
5.11
0
0
GO:0005576
14none
 
yes
before_TSS
56
674
8.3
4.8
1.71
4.328
0
0.0001
GO:0009887 organ morphogenesis
15none
 
yes
at_TSS
54
941
5.7
3.7
1.52
3.306
0.0009
0.0048
GO:0030528 transcription regulator activity
16none
 
 
at_TSS
49
322
15.2
9.6
1.57
3.435
0.0005
0.0722
GO:0005783
17none
 
yes
before_TSS
45
538
8.3
4.8
1.73
3.906
0
0.0022
GO:0030154 cell differentiation
18none
 
yes
at_TSS
43
719
5.9
3.7
1.58
3.212
0.0013
0.007
GO:0003700 transcription factor activity
19none
 
 
at_TSS
37
237
15.6
9.6
1.61
3.144
0.0016
0.0179
GO:0043207 response to external biotic stimulus
20none
 
 
at_TSS
37
220
16.8
9.6
1.74
3.639
0.0002
0.0066
GO:0051276 chromosome organization and biogenesis
21none
 
 
at_TSS
36
188
19.1
9.6
1.98
4.45
0
0.0002
GO:0006323 DNA packaging
22none
 
 
at_TSS
35
221
15.8
9.6
1.64
3.148
0.0016
0.0207
GO:0009613 response to pest, pathogen or parasite
23none
 
 
at_TSS
35
208
16.8
9.6
1.74
3.54
0.0004
0.0086
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
24none
 
 
at_TSS
33
179
18.4
9.6
1.91
4.015
0
0.0014
GO:0006325 establishment and/or maintenance of chromatin architecture
25none
 
yes
before_TSS
31
408
7.5
4.8
1.57
2.648
0.008
0.08
GO:0048519 negative regulation of biological process
26none
 
yes
before_TSS
30
375
8
4.8
1.65
2.904
0.0036
0.0464
GO:0048523 negative regulation of cellular process
27none
 
yes
before_TSS
28
302
9.2
4.8
1.91
3.641
0.0002
0.0016
GO:0005667
28none
 
 
at_TSS
28
121
23.1
9.6
2.39
5.055
0
0
GO:0006333 chromatin assembly or disassembly
29none
 
yes
before_TSS
27
330
8.1
4.8
1.69
2.875
0.004
0.0509
GO:0051243 negative regulation of cellular physiological process
30none
 
yes
before_TSS
27
342
7.8
4.8
1.63
2.677
0.0074
0.0799
GO:0043118 negative regulation of physiological process
31none
 
 
at_TSS
27
123
21.9
9.6
2.27
4.648
0
0
GO:0006461 protein complex assembly
32none
 
yes
before_TSS
27
301
8.9
4.8
1.85
3.388
0.0007
0.0056
GO:0007399 nervous system development
33none
 
 
at_TSS
26
95
27.3
9.6
2.83
5.876
0
0
GO:0031497 chromatin assembly
34none
 
 
at_TSS
26
86
30.2
9.6
3.13
6.491
0
0
GO:0006334 nucleosome assembly
35none
 
 
at_TSS
25
78
32
9.6
3.32
6.726
0
0
GO:0000786
36none
 
yes
before_TSS
24
238
10
4.8
2.08
3.814
0.0001
0.01
GO:0000902 cellular morphogenesis
37none
 
 
after_TSS
23
97
23.7
9.3
2.53
4.871
0
0.0001
GO:0005179 hormone activity
38none
 
yes
before_TSS
22
231
9.5
4.8
1.97
3.355
0.0007
0.0363
GO:0006366 transcription from RNA polymerase II promoter
39none
 
 
at_TSS
21
88
23.8
9.6
2.47
4.536
0
0.0002
GO:0005694
40none
 
 
at_TSS
20
91
21.9
9.6
2.27
4.001
0
0.0057
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
41none
 
 
at_TSS
20
108
18.5
9.6
1.92
3.139
0.0016
0.0689
GO:0004518 nuclease activity
42none
 
yes
at_TSS
20
302
6.6
3.7
1.75
2.638
0.0083
0.0492
GO:0005667
43none
 
yes
before_TSS
19
191
9.9
4.8
2.05
3.321
0.0008
0.041
GO:0006357 regulation of transcription from RNA polymerase II promoter
44none
 
yes
before_TSS
19
162
11.7
4.8
2.42
4.119
0
0.0013
GO:0048468 cell development
45none
 
 
at_TSS
19
90
21.1
9.6
2.18
3.699
0.0002
0.0072
GO:0004497 monooxygenase activity
46none
 
yes
before_TSS
18
137
13.1
4.8
2.71
4.558
0
0.0002
GO:0030182 neuron differentiation
47none
 
 
at_TSS
17
89
19.1
9.6
1.98
3.034
0.0024
0.0883
GO:0000087 M phase of mitotic cell cycle
48none
 
 
at_TSS
17
88
19.3
9.6
2
3.086
0.002
0.0824
GO:0007067 mitosis
49none
 
yes
before_TSS
16
107
14.9
4.8
3.09
4.902
0
0.0001
GO:0000904 cellular morphogenesis during differentiation
50none
 
yes
before_TSS
14
108
12.9
4.8
2.68
3.956
0
0.0039
GO:0048666 neuron development
51none
 
yes
before_TSS
14
96
14.5
4.8
3.01
4.471
0
0.0007
GO:0031175 neurite morphogenesis
52none
 
yes
before_TSS
14
96
14.5
4.8
3.01
4.471
0
0.0007
GO:0048667 neuron morphogensis during differentiation
53none
 
yes
at_TSS
14
122
11.4
3.7
3.04
4.493
0
0.0025
GO:0000279 M phase
54none
 
yes
before_TSS
13
132
9.8
4.8
2.03
2.701
0.0069
0.0937
GO:0031324 negative regulation of cellular metabolism
55none
 
yes
before_TSS
13
128
10.1
4.8
2.1
2.822
0.0047
0.0296
GO:0007389 pattern specification
56none
 
yes
before_TSS
13
121
10.7
4.8
2.22
3.046
0.0023
0.0471
GO:0006333 chromatin assembly or disassembly
57none
 
yes
before_TSS
13
115
11.3
4.8
2.33
3.25
0.0011
0.0222
GO:0016481 negative regulation of transcription
58none
 
yes
before_TSS
13
121
10.7
4.8
2.22
3.046
0.0023
0.0339
GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
59none
 
yes
before_TSS
12
81
14.8
4.8
3.06
4.202
0
0.0016
GO:0007409 axonogenesis
60none
 
 
at_TSS
11
39
28.2
9.6
2.92
3.933
0
0.0307
GO:0004527 exonuclease activity
61none
 
yes
before_TSS
11
76
14.4
4.8
2.99
3.93
0
0.0017
GO:0007417 central nervous system development
62none
 
yes
before_TSS
10
63
15.8
4.8
3.28
4.096
0
0.0011
GO:0007420 brain development
63none
 
 
at_TSS
10
33
30.3
9.6
3.14
4.026
0
0.0051
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
64none
yes
 
at_TSS
10
179
5.5
0.7
7.43
7.543
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
65none
 
yes
before_TSS
10
82
12.1
4.8
2.52
3.118
0.0018
0.0666
GO:0045892 negative regulation of transcription, DNA-dependent
66none
yes
 
at_TSS
10
188
5.3
0.7
7.07
7.306
0
0
GO:0006323 DNA packaging
67MIT_005NFY
 
 
at_TSS
11
95
11.5
1.6
7.18
7.746
0
0
GO:0031497 chromatin assembly
68MIT_005NFY
 
 
at_TSS
11
78
14.1
1.6
8.75
8.79
0
0
GO:0000786
69MIT_005NFY
 
 
at_TSS
11
123
8.9
1.6
5.55
6.491
0
0
GO:0006461 protein complex assembly
70MIT_005NFY
 
 
at_TSS
11
86
12.7
1.6
7.93
8.263
0
0
GO:0006334 nucleosome assembly
71MIT_006SP1
 
 
before_TSS
13
220
5.9
2
2.88
4.078
0
0.0225
GO:0051276 chromosome organization and biogenesis
72MIT_006SP1
 
 
before_TSS
11
188
5.8
2
2.85
3.708
0.0002
0.0806
GO:0006323 DNA packaging
73MIT_006SP1
 
 
before_TSS
11
179
6.1
2
2.99
3.897
0
0.0425
GO:0006325 establishment and/or maintenance of chromatin architecture
74MIT_006SP1
 
 
at_TSS
10
89
11.2
3.2
3.48
4.296
0
0.0751
GO:0000087 M phase of mitotic cell cycle
75MIT_006SP1
 
 
at_TSS
10
88
11.3
3.2
3.52
4.34
0
0.0684
GO:0007067 mitosis
76MIT_046
 
 
at_TSS
12
188
6.3
0.8
7.42
8.269
0
0
GO:0006323 DNA packaging
77MIT_046
 
 
at_TSS
12
220
5.4
0.8
6.34
7.452
0
0
GO:0051276 chromosome organization and biogenesis
78MIT_046
 
 
at_TSS
11
208
5.2
0.8
6.15
6.98
0
0
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
79MIT_046
 
 
at_TSS
11
121
9
0.8
10.57
9.859
0
0
GO:0006333 chromatin assembly or disassembly
80MIT_046
 
 
at_TSS
11
179
6.1
0.8
7.15
7.719
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
81MIT_046
 
 
at_TSS
10
86
11.6
0.8
13.53
10.857
0
0
GO:0006334 nucleosome assembly
82MIT_046
 
 
at_TSS
10
88
11.3
0.8
13.22
10.714
0
0
GO:0005694
83MIT_046
 
 
at_TSS
10
123
8.1
0.8
9.46
8.78
0
0
GO:0006461 protein complex assembly
84MIT_046
 
 
at_TSS
10
78
12.8
0.8
14.91
11.481
0
0
GO:0000786
85MIT_046
 
 
at_TSS
10
95
10.5
0.8
12.25
10.248
0
0
GO:0031497 chromatin assembly
86MIT_051TATA
 
 
at_TSS
10
179
5.5
0.7
7.95
7.883
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
87MIT_051TATA
 
 
at_TSS
10
121
8.2
0.7
11.76
10.01
0
0
GO:0006333 chromatin assembly or disassembly
88MIT_051TATA
 
 
at_TSS
10
188
5.3
0.7
7.57
7.639
0
0
GO:0006323 DNA packaging
89TF_CREB
 
 
at_TSS
10
123
8.1
2
3.88
4.705
0
0.0033
GO:0006461 protein complex assembly
90TF_LHX
 
 
before_TSS
17
220
7.7
3.1
2.48
3.974
0
0.0335
GO:0051276 chromosome organization and biogenesis
91TF_LHX
 
 
before_TSS
16
208
7.6
3.1
2.46
3.833
0.0001
0.0541
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
92TF_NFY
 
 
at_TSS
40
427
9.3
3
3.1
7.813
0
0
GO:0006259 DNA metabolism
93TF_NFY
 
 
at_TSS
27
188
14.3
3
4.76
9.167
0
0
GO:0006323 DNA packaging
94TF_NFY
 
 
at_TSS
26
220
11.8
3
3.91
7.704
0
0
GO:0051276 chromosome organization and biogenesis
95TF_NFY
 
 
at_TSS
25
208
12
3
3.98
7.658
0
0
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
96TF_NFY
 
 
at_TSS
25
179
13.9
3
4.63
8.63
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
97TF_NFY
 
 
at_TSS
24
121
19.8
3
6.57
10.871
0
0
GO:0006333 chromatin assembly or disassembly
98TF_NFY
 
 
at_TSS
23
86
26.7
3
8.86
12.912
0
0
GO:0006334 nucleosome assembly
99TF_NFY
 
 
at_TSS
23
350
6.5
3
2.17
3.946
0
0.0817
GO:0006886 intracellular protein transport
100TF_NFY
 
 
at_TSS
23
123
18.6
3
6.2
10.222
0
0
GO:0006461 protein complex assembly
101TF_NFY
 
 
at_TSS
23
95
24.2
3
8.02
12.126
0
0
GO:0031497 chromatin assembly
102TF_NFY
 
 
at_TSS
22
78
28.2
3
9.35
13.049
0
0
GO:0000786
103TF_NFY
 
 
at_TSS
17
88
19.3
3
6.4
8.974
0
0
GO:0005694
104TF_OCT
 
 
at_TSS
10
188
5.3
0.5
10.38
9.304
0
0
GO:0006323 DNA packaging
105TF_PBX
 
 
at_TSS
10
179
5.5
1
5.45
6.106
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
106TF_PBX
 
 
at_TSS
10
188
5.3
1
5.19
5.893
0
0
GO:0006323 DNA packaging
107TF_POU3F
 
 
at_TSS
10
188
5.3
0.5
10.05
9.127
0
0
GO:0006323 DNA packaging
108TF_POU3F
 
 
at_TSS
10
78
12.8
0.5
24.24
15.015
0
0
GO:0000786
109TF_POU3F
 
 
at_TSS
10
121
8.2
0.5
15.62
11.791
0
0
GO:0006333 chromatin assembly or disassembly
110TF_POU3F
 
 
at_TSS
10
179
5.5
0.5
10.56
9.399
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
111TF_POU3F
 
 
at_TSS
10
86
11.6
0.5
21.98
14.242
0
0
GO:0006334 nucleosome assembly
112TF_POU3F
 
 
at_TSS
10
95
10.5
0.5
19.9
13.488
0
0
GO:0031497 chromatin assembly
113TF_POU3F
 
 
at_TSS
10
123
8.1
0.5
15.37
11.682
0
0
GO:0006461 protein complex assembly
114TF_SP1
 
 
at_TSS
11
89
12.3
3.4
3.59
4.637
0
0.019
GO:0000087 M phase of mitotic cell cycle
115TF_SP1
 
 
at_TSS
11
88
12.5
3.4
3.63
4.683
0
0.0174
GO:0007067 mitosis