CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_E47

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_E47
TF_E47 alone
In pair
with
1GO:0015267 channel or pore class transporter activity
307
at_TSS
45
yes
MIT_024MAZ,
2GO:0015268 alpha-type channel activity
295
at_TSS
44
yes
MIT_024MAZ,
3GO:0007399 nervous system development
301
after_TSS
43
yes
 
4GO:0009607 response to biotic stimulus
483
before_TSS
41
yes
TF_AP1,
5GO:0006952 defense response
463
before_TSS
40
yes
TF_AP1,
6GO:0004674 protein serine/threonine kinase activity
418
before_TSS
31
 
MIT_056PAX4,
7GO:0004672 protein kinase activity
466
before_TSS
31
 
MIT_056PAX4,
8GO:0004713 protein-tyrosine kinase activity
381
before_TSS
28
 
MIT_056PAX4,
9GO:0048468 cell development
162
after_TSS
27
yes
 
10GO:0008236 serine-type peptidase activity
158
at_TSS
26
yes
 
11GO:0004252 serine-type endopeptidase activity
140
at_TSS,after_TSS
26
yes
 
12GO:0006259 DNA metabolism
427
before_TSS
26
 
TF_STAF, TF_PAX4,
13GO:0006325 establishment and/or maintenance of chromatin architecture
179
before_TSS
24
yes
many
14GO:0006323 DNA packaging
188
before_TSS
24
yes
many
15GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
208
before_TSS,after_TSS
24
yes
many
16GO:0004263 chymotrypsin activity
90
at_TSS
24
yes
 
17GO:0051276 chromosome organization and biogenesis
220
before_TSS,after_TSS
24
 
many
18GO:0004295 trypsin activity
101
at_TSS
24
yes
 
19GO:0006333 chromatin assembly or disassembly
121
before_TSS
21
yes
many
20GO:0006461 protein complex assembly
123
before_TSS
21
yes
many
21GO:0031497 chromatin assembly
95
before_TSS
20
yes
many
22GO:0048666 neuron development
108
after_TSS
20
yes
 
23GO:0006334 nucleosome assembly
86
before_TSS
18
yes
many
24GO:0007267 cell-cell signaling
184
at_TSS
17
yes
 
25GO:0005125 cytokine activity
173
before_TSS
16
 
TF_SREBP,
26GO:0005216 ion channel activity
269
at_TSS
15
 
MIT_024MAZ,
27GO:0006887 exocytosis
49
after_TSS
12
yes
 
28GO:0015290 electrochemical potential-driven transporter activity
171
after_TSS
12
 
TF_AML,
29GO:0019953 sexual reproduction
145
after_TSS
12
yes
 
30GO:0015291 porter activity
170
after_TSS
12
 
TF_AML,
31GO:0000003 reproduction
171
after_TSS
12
yes
 
32GO:0046983 protein dimerization activity
56
before_TSS
11
yes
 
33GO:0046903 secretion
123
after_TSS
10
yes
 
34GO:0045045 secretory pathway
101
after_TSS
10
yes
 
35GO:0007276 gametogenesis
119
after_TSS
10
yes
 

Pairs of TF_E47 binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_STAF
before_TSS
9
GO:0006259 DNA metabolism
26
427
2TF_PAX4
before_TSS,after_TSS
9
GO:0006259 DNA metabolism
26
427
3MIT_165
before_TSS
8
GO:0051276 chromosome organization and biogenesis
16
220
4TF_RFX
before_TSS
8
GO:0051276 chromosome organization and biogenesis
17
220
5TF_ER
before_TSS
8
GO:0051276 chromosome organization and biogenesis
19
220
6TF_AHR
before_TSS
8
GO:0051276 chromosome organization and biogenesis
24
220
7TF_SP1
before_TSS
8
GO:0006334 nucleosome assembly
16
86
8MIT_024MAZ
at_TSS
3
GO:0015268 alpha-type channel activity
16
295
9MIT_056PAX4
before_TSS
3
GO:0004674 protein serine/threonine kinase activity
31
418
10TF_AP1
before_TSS
2
GO:0006952 defense response
26
463
11TF_ATF1
before_TSS
2
GO:0031497 chromatin assembly
12
95
12TF_AML
after_TSS
2
GO:0015291 porter activity
12
170
13TF_CREB
before_TSS
2
GO:0006334 nucleosome assembly
11
86
14TF_SREBP
before_TSS
1
GO:0005125 cytokine activity
16
173

Details on Gene Ontology terms for targets of TF_E47

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
at_TSS
45
307
14.6
8.5
1.7
3.84
0.0001
0.045
GO:0015267 channel or pore class transporter activity
2none
 
 
at_TSS
44
295
14.9
8.5
1.73
3.922
0
0.0321
GO:0015268 alpha-type channel activity
3none
 
yes
after_TSS
43
301
14.2
9
1.57
3.195
0.0013
0.0196
GO:0007399 nervous system development
4none
yes
 
before_TSS
41
483
8.4
5.2
1.61
3.229
0.0012
0.0505
GO:0009607 response to biotic stimulus
5none
yes
 
before_TSS
40
463
8.6
5.2
1.63
3.306
0.0009
0.0346
GO:0006952 defense response
6none
 
yes
before_TSS
32
302
10.5
6.6
1.58
2.756
0.0058
0.0214
GO:0005667
7none
 
yes
after_TSS
27
162
16.6
9
1.83
3.393
0.0006
0.0253
GO:0048468 cell development
8none
 
 
at_TSS
26
158
16.4
8.5
1.91
3.549
0.0003
0.0141
GO:0008236 serine-type peptidase activity
9none
 
 
at_TSS
26
140
18.5
8.5
2.16
4.237
0
0.0013
GO:0004252 serine-type endopeptidase activity
10none
 
yes
before_TSS
24
188
12.7
6.6
1.9
3.364
0.0007
0.0156
GO:0006323 DNA packaging
11none
 
 
at_TSS
24
101
23.7
8.5
2.76
5.462
0
0
GO:0004295 trypsin activity
12none
 
yes
before_TSS
24
179
13.4
6.6
2
3.628
0.0002
0.0069
GO:0006325 establishment and/or maintenance of chromatin architecture
13none
 
yes
before_TSS
24
208
11.5
6.6
1.72
2.827
0.0046
0.0781
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
14none
 
 
at_TSS
24
90
26.6
8.5
3.1
6.14
0
0
GO:0004263 chymotrypsin activity
15none
 
yes
before_TSS
21
123
17
6.6
2.55
4.636
0
0.0002
GO:0006461 protein complex assembly
16none
 
 
after_TSS
21
48
43.7
20.1
2.17
4.091
0
0.0078
GO:0008021
17none
 
yes
before_TSS
21
121
17.3
6.6
2.59
4.723
0
0.0001
GO:0006333 chromatin assembly or disassembly
18none
 
yes
after_TSS
20
108
18.5
9
2.04
3.437
0.0005
0.0269
GO:0048666 neuron development
19none
 
yes
before_TSS
19
95
20
6.6
2.99
5.216
0
0
GO:0031497 chromatin assembly
20none
 
yes
before_TSS
18
86
20.9
6.6
3.13
5.308
0
0
GO:0006334 nucleosome assembly
21none
 
yes
before_TSS
18
78
23
6.6
3.45
5.815
0
0
GO:0000786
22none
 
yes
at_TSS
18
242
7.4
3.8
1.91
2.891
0.0038
0.0937
GO:0005856
23none
 
yes
at_TSS
17
184
9.2
3.8
2.37
3.789
0.0001
0.0138
GO:0007267 cell-cell signaling
24none
 
yes
before_TSS
15
88
17
6.6
2.55
3.905
0
0.0028
GO:0005694
25none
 
yes
after_TSS
13
51
25.4
9
2.81
4.094
0
0.0077
GO:0045202
26none
yes
 
after_TSS
12
145
8.2
2.7
3.06
4.164
0
0.0114
GO:0019953 sexual reproduction
27none
yes
 
after_TSS
12
171
7
2.7
2.59
3.505
0.0004
0.0835
GO:0000003 reproduction
28none
 
yes
after_TSS
12
45
26.6
9
2.94
4.12
0
0.0138
GO:0005923
29none
 
yes
after_TSS
12
49
24.4
9
2.7
3.768
0.0001
0.0602
GO:0006887 exocytosis
30none
 
 
at_TSS
12
45
26.6
8.5
3.1
4.333
0
0.0026
GO:0005923
31none
yes
 
after_TSS
11
140
7.8
2.7
2.9
3.783
0.0001
0.0567
GO:0004252 serine-type endopeptidase activity
32none
 
yes
before_TSS
11
56
19.6
6.6
2.93
3.891
0
0.0121
GO:0046983 protein dimerization activity
33none
yes
 
after_TSS
10
101
9.9
2.7
3.66
4.48
0
0.0027
GO:0045045 secretory pathway
34none
yes
 
after_TSS
10
119
8.4
2.7
3.11
3.854
0.0001
0.0425
GO:0007276 gametogenesis
35none
yes
 
after_TSS
10
123
8.1
2.7
3
3.731
0.0001
0.0349
GO:0046903 secretion
36MIT_024MAZ
 
 
at_TSS
16
307
5.2
1.6
3.12
4.907
0
0.0399
GO:0015267 channel or pore class transporter activity
37MIT_024MAZ
 
 
at_TSS
16
295
5.4
1.6
3.24
5.096
0
0.0149
GO:0015268 alpha-type channel activity
38MIT_024MAZ
 
 
at_TSS
15
269
5.5
1.6
3.34
5.058
0
0.0183
GO:0005216 ion channel activity
39MIT_056PAX4
 
 
before_TSS
31
466
6.6
3.1
2.08
4.322
0
0.0835
GO:0004672 protein kinase activity
40MIT_056PAX4
 
 
before_TSS
31
418
7.4
3.1
2.31
4.989
0
0.0087
GO:0004674 protein serine/threonine kinase activity
41MIT_056PAX4
 
 
before_TSS
28
381
7.3
3.1
2.29
4.68
0
0.0206
GO:0004713 protein-tyrosine kinase activity
42MIT_165
 
 
before_TSS
16
188
8.5
0.4
21.02
17.639
0
0
GO:0006323 DNA packaging
43MIT_165
 
 
before_TSS
16
95
16.8
0.4
41.6
25.328
0
0
GO:0031497 chromatin assembly
44MIT_165
 
 
before_TSS
16
220
7.2
0.4
17.96
16.189
0
0
GO:0051276 chromosome organization and biogenesis
45MIT_165
 
 
before_TSS
16
78
20.5
0.4
50.66
28.056
0
0
GO:0000786
46MIT_165
 
 
before_TSS
16
123
13
0.4
32.13
22.124
0
0
GO:0006461 protein complex assembly
47MIT_165
 
 
before_TSS
16
121
13.2
0.4
32.66
22.315
0
0
GO:0006333 chromatin assembly or disassembly
48MIT_165
 
 
before_TSS
16
179
8.9
0.4
22.07
18.113
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
49MIT_165
 
 
before_TSS
16
86
18.6
0.4
45.95
26.673
0
0
GO:0006334 nucleosome assembly
50MIT_165
 
 
before_TSS
16
208
7.6
0.4
19
16.694
0
0
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
51MIT_165
 
 
before_TSS
13
88
14.7
0.4
36.48
21.302
0
0
GO:0005694
52TF_AHR
 
 
before_TSS
24
220
10.9
4.9
2.2
4.113
0
0.02
GO:0051276 chromosome organization and biogenesis
53TF_AHR
 
 
before_TSS
23
208
11
4.9
2.23
4.097
0
0.02
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
54TF_AHR
 
 
before_TSS
23
179
12.8
4.9
2.59
4.909
0
0.0005
GO:0006325 establishment and/or maintenance of chromatin architecture
55TF_AHR
 
 
before_TSS
23
188
12.2
4.9
2.47
4.641
0
0.0021
GO:0006323 DNA packaging
56TF_AHR
 
 
before_TSS
20
95
21
4.9
4.25
7.264
0
0
GO:0031497 chromatin assembly
57TF_AHR
 
 
before_TSS
20
121
16.5
4.9
3.33
5.902
0
0
GO:0006333 chromatin assembly or disassembly
58TF_AHR
 
 
before_TSS
18
123
14.6
4.9
2.95
4.977
0
0.0003
GO:0006461 protein complex assembly
59TF_AHR
 
 
before_TSS
18
86
20.9
4.9
4.22
6.857
0
0
GO:0006334 nucleosome assembly
60TF_AHR
 
 
before_TSS
17
78
21.7
4.9
4.4
6.881
0
0
GO:0000786
61TF_AHR
 
 
before_TSS
15
88
17
4.9
3.44
5.25
0
0
GO:0005694
62TF_AML
 
 
after_TSS
12
170
7
1.5
4.47
5.774
0
0.0003
GO:0015291 porter activity
63TF_AML
 
 
after_TSS
12
171
7
1.5
4.44
5.747
0
0.0003
GO:0015290 electrochemical potential-driven transporter activity
64TF_AP1
 
 
before_TSS
26
483
5.3
2.4
2.23
4.361
0
0.0466
GO:0009607 response to biotic stimulus
65TF_AP1
 
 
before_TSS
26
463
5.6
2.4
2.33
4.599
0
0.0229
GO:0006952 defense response
66TF_ATF1
 
 
before_TSS
12
95
12.6
3.7
3.39
4.609
0
0.0015
GO:0031497 chromatin assembly
67TF_ATF1
 
 
before_TSS
11
86
12.7
3.7
3.44
4.462
0
0.0029
GO:0006334 nucleosome assembly
68TF_ATF1
 
 
before_TSS
10
78
12.8
3.7
3.44
4.262
0
0.0076
GO:0000786
69TF_ATF1
 
 
before_TSS
10
88
11.3
3.7
3.05
3.804
0.0001
0.0508
GO:0005694
70TF_CREB
 
 
before_TSS
12
88
13.6
3.6
3.78
5.069
0
0.0002
GO:0005694
71TF_CREB
 
 
before_TSS
11
86
12.7
3.6
3.55
4.588
0
0.0016
GO:0006334 nucleosome assembly
72TF_CREB
 
 
before_TSS
11
95
11.5
3.6
3.21
4.188
0
0.0098
GO:0031497 chromatin assembly
73TF_CREB
 
 
before_TSS
10
78
12.8
3.6
3.55
4.382
0
0.0045
GO:0000786
74TF_ER
 
 
before_TSS
19
220
8.6
2.8
2.98
5.131
0
0.0002
GO:0051276 chromosome organization and biogenesis
75TF_ER
 
 
before_TSS
19
208
9.1
2.8
3.15
5.419
0
0
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
76TF_ER
 
 
before_TSS
18
188
9.5
2.8
3.31
5.51
0
0
GO:0006323 DNA packaging
77TF_ER
 
 
before_TSS
18
179
10
2.8
3.47
5.762
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
78TF_ER
 
 
before_TSS
18
78
23
2.8
7.98
10.672
0
0
GO:0000786
79TF_ER
 
 
before_TSS
18
121
14.8
2.8
5.14
7.905
0
0
GO:0006333 chromatin assembly or disassembly
80TF_ER
 
 
before_TSS
17
86
19.7
2.8
6.83
9.371
0
0
GO:0006334 nucleosome assembly
81TF_ER
 
 
before_TSS
17
95
17.8
2.8
6.18
8.76
0
0
GO:0031497 chromatin assembly
82TF_ER
 
 
before_TSS
17
123
13.8
2.8
4.77
7.269
0
0
GO:0006461 protein complex assembly
83TF_ER
 
 
before_TSS
15
88
17
2.8
5.89
7.951
0
0
GO:0005694
84TF_PAX4
 
 
before_TSS
26
427
6
2.3
2.63
5.283
0
0.0002
GO:0006259 DNA metabolism
85TF_PAX4
 
 
before_TSS
19
188
10.1
2.3
4.36
7.163
0
0
GO:0006323 DNA packaging
86TF_PAX4
 
 
before_TSS
18
220
8.1
2.3
3.53
5.843
0
0
GO:0051276 chromosome organization and biogenesis
87TF_PAX4
 
 
before_TSS
18
179
10
2.3
4.34
6.941
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
88TF_PAX4
 
 
before_TSS
18
208
8.6
2.3
3.74
6.135
0
0
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
89TF_PAX4
 
 
before_TSS
16
121
13.2
2.3
5.71
8.022
0
0
GO:0006333 chromatin assembly or disassembly
90TF_PAX4
 
 
before_TSS
15
78
19.2
2.3
8.31
9.97
0
0
GO:0000786
91TF_PAX4
 
 
before_TSS
15
86
17.4
2.3
7.53
9.365
0
0
GO:0006334 nucleosome assembly
92TF_PAX4
 
 
before_TSS
15
95
15.7
2.3
6.82
8.771
0
0
GO:0031497 chromatin assembly
93TF_PAX4
 
 
before_TSS
15
123
12.1
2.3
5.27
7.327
0
0
GO:0006461 protein complex assembly
94TF_PAX4
 
 
before_TSS
14
88
15.9
2.3
6.87
8.514
0
0
GO:0005694
95TF_PAX4
 
 
after_TSS
12
208
5.7
1.6
3.59
4.825
0
0.0011
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
96TF_PAX4
 
 
after_TSS
12
220
5.4
1.6
3.4
4.59
0
0.0033
GO:0051276 chromosome organization and biogenesis
97TF_RFX
 
 
before_TSS
17
208
8.1
2.7
2.95
4.792
0
0.001
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
98TF_RFX
 
 
before_TSS
17
188
9
2.7
3.26
5.285
0
0
GO:0006323 DNA packaging
99TF_RFX
 
 
before_TSS
17
179
9.4
2.7
3.43
5.528
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
100TF_RFX
 
 
before_TSS
17
220
7.7
2.7
2.79
4.525
0
0.0038
GO:0051276 chromosome organization and biogenesis
101TF_RFX
 
 
before_TSS
16
95
16.8
2.7
6.08
8.394
0
0
GO:0031497 chromatin assembly
102TF_RFX
 
 
before_TSS
16
86
18.6
2.7
6.72
8.983
0
0
GO:0006334 nucleosome assembly
103TF_RFX
 
 
before_TSS
16
123
13
2.7
4.69
6.957
0
0
GO:0006461 protein complex assembly
104TF_RFX
 
 
before_TSS
16
121
13.2
2.7
4.77
7.045
0
0
GO:0006333 chromatin assembly or disassembly
105TF_RFX
 
 
before_TSS
15
78
19.2
2.7
6.94
8.891
0
0
GO:0000786
106TF_RFX
 
 
before_TSS
12
88
13.6
2.7
4.92
6.237
0
0
GO:0005694
107TF_SP1
 
 
before_TSS
16
78
20.5
3.3
6.17
8.499
0
0
GO:0000786
108TF_SP1
 
 
before_TSS
16
123
13
3.3
3.91
6.025
0
0
GO:0006461 protein complex assembly
109TF_SP1
 
 
before_TSS
16
86
18.6
3.3
5.6
7.937
0
0
GO:0006334 nucleosome assembly
110TF_SP1
 
 
before_TSS
16
95
16.8
3.3
5.07
7.382
0
0
GO:0031497 chromatin assembly
111TF_SP1
 
 
before_TSS
16
121
13.2
3.3
3.98
6.108
0
0
GO:0006333 chromatin assembly or disassembly
112TF_SP1
 
yes
before_TSS
13
208
6.2
0.7
7.96
9.008
0
0
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
113TF_SP1
 
yes
before_TSS
13
179
7.2
0.7
9.25
9.893
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
114TF_SP1
 
yes
before_TSS
13
188
6.9
0.7
8.8
9.598
0
0
GO:0006323 DNA packaging
115TF_SP1
 
yes
before_TSS
13
220
5.9
0.7
7.52
8.691
0
0
GO:0051276 chromosome organization and biogenesis
116TF_SP1
 
 
before_TSS
12
88
13.6
3.3
4.1
5.419
0
0
GO:0005694
117TF_SREBP
 
 
before_TSS
16
173
9.2
3.2
2.84
4.485
0
0.0787
GO:0005125 cytokine activity
118TF_STAF
 
 
before_TSS
26
427
6
2.2
2.68
5.409
0
0.0001
GO:0006259 DNA metabolism
119TF_STAF
 
 
before_TSS
18
121
14.8
2.2
6.57
9.373
0
0
GO:0006333 chromatin assembly or disassembly
120TF_STAF
 
 
before_TSS
18
188
9.5
2.2
4.22
6.791
0
0
GO:0006323 DNA packaging
121TF_STAF
 
 
before_TSS
18
208
8.6
2.2
3.82
6.249
0
0
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
122TF_STAF
 
 
before_TSS
18
179
10
2.2
4.44
7.06
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
123TF_STAF
 
 
before_TSS
18
220
8.1
2.2
3.61
5.955
0
0
GO:0051276 chromosome organization and biogenesis
124TF_STAF
 
 
before_TSS
17
78
21.7
2.2
9.62
11.633
0
0
GO:0000786
125TF_STAF
 
 
before_TSS
17
86
19.7
2.2
8.73
10.95
0
0
GO:0006334 nucleosome assembly
126TF_STAF
 
 
before_TSS
17
123
13.8
2.2
6.1
8.66
0
0
GO:0006461 protein complex assembly
127TF_STAF
 
 
before_TSS
17
95
17.8
2.2
7.9
10.282
0
0
GO:0031497 chromatin assembly
128TF_STAF
 
 
before_TSS
14
88
15.9
2.2
7.02
8.636
0
0
GO:0005694