CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_EF1D

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_EF1D
TF_EF1D alone
In pair
with
1GO:0000287 magnesium ion binding
180
before_TSS
64
yes
 
2GO:0009613 response to pest, pathogen or parasite
221
before_TSS
12
 
TF_LHX,
3GO:0006935 chemotaxis
79
before_TSS
11
 
TF_AHR,
4GO:0042330 taxis
79
before_TSS
11
 
TF_AHR,

Pairs of TF_EF1D binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_AHR
before_TSS
2
GO:0042330 taxis
11
79
2TF_LHX
before_TSS
1
GO:0009613 response to pest, pathogen or parasite
12
221

Details on Gene Ontology terms for targets of TF_EF1D

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
before_TSS
64
180
35.5
23.5
1.51
3.837
0.0001
0.0455
GO:0000287 magnesium ion binding
2TF_AHR
 
 
before_TSS
11
79
13.9
3.4
3.99
5.073
0
0.0169
GO:0042330 taxis
3TF_AHR
 
 
before_TSS
11
79
13.9
3.4
3.99
5.073
0
0.0169
GO:0006935 chemotaxis
4TF_LHX
 
 
before_TSS
12
221
5.4
1.7
3.12
4.245
0
0.0858
GO:0009613 response to pest, pathogen or parasite