CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_HAND

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_HAND
TF_HAND alone
In pair
with
1GO:0050896 response to stimulus
1020
after_TSS
166
yes
 
2GO:0050874 organismal physiological process
881
after_TSS
156
yes
 
3GO:0009607 response to biotic stimulus
483
at_TSS,after_TSS
105
yes
 
4GO:0006952 defense response
463
at_TSS,after_TSS
102
yes
 
5GO:0009605 response to external stimulus
489
after_TSS
85
yes
 
6GO:0006955 immune response
379
at_TSS,after_TSS
83
yes
 
7GO:0043207 response to external biotic stimulus
237
at_TSS,after_TSS
50
yes
 
8GO:0006950 response to stress
546
at_TSS
42
yes
 
9GO:0009613 response to pest, pathogen or parasite
221
at_TSS,after_TSS
42
yes
 
10GO:0005125 cytokine activity
173
after_TSS
37
yes
 
11GO:0030246 carbohydrate binding
208
at_TSS,before_TSS,after_TSS
37
yes
TF_EVI,
12GO:0009611 response to wounding
180
after_TSS
35
yes
 
13GO:0004857 enzyme inhibitor activity
155
at_TSS,after_TSS
27
yes
 
14GO:0005529 sugar binding
144
at_TSS,after_TSS
27
yes
 
15GO:0004866 endopeptidase inhibitor activity
112
at_TSS,after_TSS
21
yes
 
16GO:0030414 protease inhibitor activity
112
at_TSS,after_TSS
21
yes
 
17GO:0006954 inflammatory response
101
at_TSS,after_TSS
20
yes
 
18GO:0006935 chemotaxis
79
after_TSS
19
yes
 
19GO:0042330 taxis
79
after_TSS
19
yes
 
20GO:0008236 serine-type peptidase activity
158
at_TSS
16
yes
 
21GO:0004252 serine-type endopeptidase activity
140
at_TSS
15
yes
 
22GO:0004867 serine-type endopeptidase inhibitor activity
77
at_TSS
12
yes
 
23GO:0005179 hormone activity
97
before_TSS
11
 
TF_POU3F,
24GO:0004263 chymotrypsin activity
90
at_TSS
11
yes
 
25GO:0004295 trypsin activity
101
at_TSS
11
yes
 
26GO:0007600 sensory perception
196
after_TSS
10
 
MIT_060FOXO,
27GO:0001664 G-protein-coupled receptor binding
37
after_TSS
10
yes
 
28GO:0016741 transferase activity, transferring one-carbon groups
101
before_TSS
10
yes
 
29GO:0008083 growth factor activity
121
after_TSS
10
yes
 
30GO:0008168 methyltransferase activity
98
before_TSS
10
yes
 

Pairs of TF_HAND binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_POU3F
before_TSS
1
GO:0005179 hormone activity
11
97
2MIT_060FOXO
after_TSS
1
GO:0007600 sensory perception
10
196
3TF_EVI
before_TSS
1
GO:0030246 carbohydrate binding
11
208

Details on Gene Ontology terms for targets of TF_HAND

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
after_TSS
166
1020
16.2
10
1.62
6.948
0
0
GO:0050896 response to stimulus
2none
 
 
after_TSS
156
881
17.7
10
1.76
7.887
0
0
GO:0050874 organismal physiological process
3none
 
 
after_TSS
105
483
21.7
10
2.16
8.75
0
0
GO:0009607 response to biotic stimulus
4none
 
 
after_TSS
102
463
22
10
2.19
8.773
0
0
GO:0006952 defense response
5none
 
 
after_TSS
85
489
17.3
10
1.73
5.532
0
0
GO:0009605 response to external stimulus
6none
 
 
after_TSS
83
379
21.8
10
2.18
7.823
0
0
GO:0006955 immune response
7none
 
 
after_TSS
56
356
15.7
10
1.56
3.64
0.0002
0.0039
GO:0005576
8none
 
 
after_TSS
50
237
21
10
2.1
5.733
0
0
GO:0043207 response to external biotic stimulus
9none
 
 
at_TSS
49
483
10.1
4.8
2.07
5.462
0
0
GO:0009607 response to biotic stimulus
10none
 
 
at_TSS
48
463
10.3
4.8
2.11
5.57
0
0
GO:0006952 defense response
11none
 
 
after_TSS
42
221
19
10
1.89
4.487
0
0.0008
GO:0009613 response to pest, pathogen or parasite
12none
 
 
at_TSS
42
546
7.6
4.8
1.57
3.105
0.0019
0.0386
GO:0006950 response to stress
13none
 
 
at_TSS
40
379
10.5
4.8
2.15
5.192
0
0
GO:0006955 immune response
14none
 
 
after_TSS
37
208
17.7
10
1.77
3.762
0.0001
0.0068
GO:0030246 carbohydrate binding
15none
 
 
after_TSS
37
173
21.3
10
2.13
5.013
0
0
GO:0005125 cytokine activity
16none
 
 
after_TSS
35
180
19.4
10
1.94
4.241
0
0.004
GO:0009611 response to wounding
17none
 
 
at_TSS
35
356
9.8
4.8
2
4.386
0
0.0004
GO:0005576
18none
 
 
after_TSS
27
144
18.7
10
1.87
3.508
0.0004
0.011
GO:0005529 sugar binding
19none
 
 
after_TSS
27
155
17.4
10
1.73
3.086
0.002
0.053
GO:0004857 enzyme inhibitor activity
20none
 
 
at_TSS
26
237
10.9
4.8
2.24
4.381
0
0.0003
GO:0043207 response to external biotic stimulus
21none
 
 
at_TSS
25
221
11.3
4.8
2.31
4.466
0
0.0002
GO:0009613 response to pest, pathogen or parasite
22none
 
 
at_TSS
22
208
10.5
4.8
2.16
3.834
0.0001
0.0115
GO:0030246 carbohydrate binding
23none
 
 
after_TSS
21
112
18.7
10
1.87
3.089
0.002
0.0408
GO:0004866 endopeptidase inhibitor activity
24none
 
 
after_TSS
21
112
18.7
10
1.87
3.089
0.002
0.0408
GO:0030414 protease inhibitor activity
25none
 
 
after_TSS
20
101
19.8
10
1.97
3.286
0.001
0.0371
GO:0006954 inflammatory response
26none
 
 
after_TSS
19
79
24
10
2.39
4.165
0
0.0056
GO:0006935 chemotaxis
27none
 
 
after_TSS
19
79
24
10
2.39
4.165
0
0.0056
GO:0042330 taxis
28none
 
yes
before_TSS
17
302
5.6
3.4
1.64
2.138
0.0325
0.0922
GO:0005667
29none
 
 
at_TSS
16
158
10.1
4.8
2.07
3.07
0.0021
0.0652
GO:0008236 serine-type peptidase activity
30none
 
 
at_TSS
16
144
11.1
4.8
2.27
3.481
0.0004
0.0203
GO:0005529 sugar binding
31none
 
 
at_TSS
16
155
10.3
4.8
2.11
3.155
0.0016
0.0534
GO:0004857 enzyme inhibitor activity
32none
 
 
at_TSS
15
112
13.3
4.8
2.73
4.19
0
0.0034
GO:0030414 protease inhibitor activity
33none
 
 
at_TSS
15
112
13.3
4.8
2.73
4.19
0
0.0034
GO:0004866 endopeptidase inhibitor activity
34none
 
 
at_TSS
15
140
10.7
4.8
2.19
3.212
0.0013
0.0344
GO:0004252 serine-type endopeptidase activity
35none
 
 
after_TSS
15
54
27.7
10
2.77
4.354
0
0.0016
GO:0005882
36none
 
 
at_TSS
12
101
11.8
4.8
2.42
3.27
0.001
0.0328
GO:0006954 inflammatory response
37none
 
 
at_TSS
12
77
15.5
4.8
3.18
4.364
0
0.0046
GO:0004867 serine-type endopeptidase inhibitor activity
38none
 
 
at_TSS
11
90
12.2
4.8
2.49
3.236
0.0012
0.026
GO:0004263 chymotrypsin activity
39none
 
 
at_TSS
11
101
10.8
4.8
2.22
2.807
0.005
0.0795
GO:0004295 trypsin activity
40none
 
yes
after_TSS
10
121
8.2
2.7
3.04
3.77
0.0001
0.0119
GO:0008083 growth factor activity
41none
yes
 
before_TSS
10
98
10.2
2.9
3.5
4.315
0
0.0058
GO:0008168 methyltransferase activity
42none
yes
 
before_TSS
10
101
9.9
2.9
3.4
4.199
0
0.0098
GO:0016741 transferase activity, transferring one-carbon groups
43none
 
 
after_TSS
10
37
27
10
2.69
3.449
0.0005
0.0514
GO:0001664 G-protein-coupled receptor binding
44MIT_060FOXO
 
 
after_TSS
10
196
5.1
1
4.86
5.613
0
0.0008
GO:0007600 sensory perception
45TF_EVI
 
 
before_TSS
11
208
5.2
1.5
3.4
4.393
0
0.0536
GO:0030246 carbohydrate binding
46TF_POU3F
 
 
before_TSS
11
97
11.3
1.7
6.35
7.136
0
0
GO:0005179 hormone activity