CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_HOXA5

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_HOXA5
TF_HOXA5 alone
In pair
with
1GO:0009607 response to biotic stimulus
483
at_TSS,after_TSS
57
yes
 
2GO:0006952 defense response
463
at_TSS,after_TSS
56
yes
 
3GO:0050874 organismal physiological process
881
at_TSS
56
yes
 
4GO:0009653 morphogenesis
811
before_TSS
41
yes
 
5GO:0006796 phosphate metabolism
654
before_TSS
35
yes
 
6GO:0006793 phosphorus metabolism
654
before_TSS
35
yes
 
7GO:0009887 organ morphogenesis
674
before_TSS
34
yes
 
8GO:0043207 response to external biotic stimulus
237
after_TSS
32
yes
 
9GO:0009605 response to external stimulus
489
at_TSS
32
yes
 
10GO:0009613 response to pest, pathogen or parasite
221
after_TSS
30
yes
 
11GO:0016310 phosphorylation
549
before_TSS
29
yes
 
12GO:0006468 protein amino acid phosphorylation
476
before_TSS
29
yes
 
13GO:0004672 protein kinase activity
466
before_TSS
27
yes
 
14GO:0004713 protein-tyrosine kinase activity
381
before_TSS
26
yes
 
15GO:0006955 immune response
379
at_TSS
25
yes
 
16GO:0004674 protein serine/threonine kinase activity
418
before_TSS
24
yes
 
17GO:0007610 behavior
229
before_TSS
17
yes
 
18GO:0007399 nervous system development
301
before_TSS
17
yes
 
19GO:0051325 interphase
34
before_TSS
16
yes
 
20GO:0051329 interphase of mitotic cell cycle
34
before_TSS
16
yes
 
21GO:0006325 establishment and/or maintenance of chromatin architecture
179
before_TSS
12
yes
 
22GO:0006323 DNA packaging
188
before_TSS
12
yes
 
23GO:0007626 locomotory behavior
187
before_TSS
12
yes
 
24GO:0040011 locomotion
165
before_TSS
11
yes
 
25GO:0009790 embryonic development
170
before_TSS
11
yes
 
26GO:0006333 chromatin assembly or disassembly
121
before_TSS
10
yes
 
27GO:0006461 protein complex assembly
123
before_TSS
10
yes
 

Details on Gene Ontology terms for targets of TF_HOXA5

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
after_TSS
57
483
11.8
7.6
1.54
3.493
0.0004
0.0046
GO:0009607 response to biotic stimulus
2none
 
 
after_TSS
56
463
12
7.6
1.57
3.659
0.0002
0.0025
GO:0006952 defense response
3none
 
 
at_TSS
56
881
6.3
4.1
1.52
3.382
0.0007
0.0125
GO:0050874 organismal physiological process
4none
 
 
after_TSS
49
356
13.7
7.6
1.79
4.396
0
0.0003
GO:0005576
5none
 
yes
before_TSS
41
811
5
2.9
1.69
3.573
0.0003
0.0019
GO:0009653 morphogenesis
6none
 
yes
before_TSS
35
654
5.3
2.9
1.78
3.643
0.0002
0.0246
GO:0006793 phosphorus metabolism
7none
 
yes
before_TSS
35
654
5.3
2.9
1.78
3.643
0.0002
0.0246
GO:0006796 phosphate metabolism
8none
 
yes
before_TSS
34
674
5
2.9
1.68
3.22
0.0012
0.0054
GO:0009887 organ morphogenesis
9none
 
 
after_TSS
32
237
13.5
7.6
1.76
3.415
0.0006
0.0111
GO:0043207 response to external biotic stimulus
10none
 
 
at_TSS
32
489
6.5
4.1
1.57
2.688
0.0071
0.0526
GO:0009605 response to external stimulus
11none
 
 
at_TSS
31
483
6.4
4.1
1.54
2.53
0.0114
0.0564
GO:0009607 response to biotic stimulus
12none
 
 
after_TSS
30
221
13.5
7.6
1.77
3.337
0.0008
0.0123
GO:0009613 response to pest, pathogen or parasite
13none
 
 
at_TSS
30
463
6.4
4.1
1.55
2.542
0.011
0.056
GO:0006952 defense response
14none
 
yes
before_TSS
29
549
5.2
2.9
1.76
3.225
0.0012
0.0658
GO:0016310 phosphorylation
15none
 
yes
before_TSS
29
476
6
2.9
2.03
4.052
0
0.0061
GO:0006468 protein amino acid phosphorylation
16none
 
yes
before_TSS
27
466
5.7
2.9
1.93
3.622
0.0002
0.0267
GO:0004672 protein kinase activity
17none
 
yes
before_TSS
26
381
6.8
2.9
2.28
4.463
0
0.0014
GO:0004713 protein-tyrosine kinase activity
18none
 
 
at_TSS
25
379
6.5
4.1
1.58
2.407
0.016
0.0905
GO:0006955 immune response
19none
 
 
at_TSS
24
356
6.7
4.1
1.61
2.47
0.0135
0.0824
GO:0005576
20none
 
yes
before_TSS
24
418
5.7
2.9
1.91
3.359
0.0007
0.0715
GO:0004674 protein serine/threonine kinase activity
21none
 
yes
before_TSS
17
229
7.4
2.9
2.48
3.975
0
0.0042
GO:0007610 behavior
22none
 
yes
before_TSS
17
301
5.6
2.9
1.88
2.74
0.0061
0.0316
GO:0007399 nervous system development
23none
 
 
before_TSS
16
34
47
22
2.13
3.531
0.0004
0.0757
GO:0051325 interphase
24none
 
yes
before_TSS
16
302
5.2
2.9
1.77
2.383
0.0171
0.0551
GO:0005667
25none
 
 
before_TSS
16
34
47
22
2.13
3.531
0.0004
0.0757
GO:0051329 interphase of mitotic cell cycle
26none
 
yes
before_TSS
12
187
6.4
2.9
2.14
2.771
0.0055
0.0786
GO:0007626 locomotory behavior
27none
yes
 
before_TSS
12
188
6.3
2.9
2.18
2.835
0.0045
0.0838
GO:0006323 DNA packaging
28none
yes
 
before_TSS
12
179
6.7
2.9
2.29
3.022
0.0025
0.0574
GO:0006325 establishment and/or maintenance of chromatin architecture
29none
 
yes
before_TSS
11
165
6.6
2.9
2.22
2.79
0.0052
0.0643
GO:0040011 locomotion
30none
 
yes
before_TSS
11
170
6.4
2.9
2.16
2.682
0.0073
0.0787
GO:0009790 embryonic development
31none
yes
 
before_TSS
10
121
8.2
2.9
2.82
3.503
0.0004
0.012
GO:0006333 chromatin assembly or disassembly
32none
yes
 
before_TSS
10
123
8.1
2.9
2.77
3.443
0.0005
0.0191
GO:0006461 protein complex assembly