Gene Ontology terms for targets of TF

CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_NFY

No.	GO annotation	Total genes with GO	Location	Max no. of genes with TF_NFY	TF_NFY alone	In pair with
1	GO:0050794 regulation of cellular process	2068	before_TSS	231	yes
2	GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolism	2284	at_TSS	224	yes	TF_NFY,
3	GO:0051244 regulation of cellular physiological process	1986	before_TSS	223	yes
4	GO:0019222 regulation of metabolism	1541	before_TSS	191	yes
5	GO:0031323 regulation of cellular metabolism	1510	before_TSS	191	yes
6	GO:0006350 transcription	1461	before_TSS	190	yes
7	GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism	1420	before_TSS	186	yes
8	GO:0045449 regulation of transcription	1410	before_TSS	185	yes
9	GO:0006351 transcription, DNA-dependent	1383	before_TSS	182	yes
10	GO:0006355 regulation of transcription, DNA-dependent	1362	before_TSS	180	yes
11	GO:0003677 DNA binding	1509	at_TSS	162	yes	TF_MAZR, TF_NFY,
12	GO:0006259 DNA metabolism	427	at_TSS	156	yes	many
13	GO:0030528 transcription regulator activity	941	at_TSS,before_TSS	132	yes	TF_AP2, TF_MAZR,
14	GO:0030554 adenyl nucleotide binding	1036	at_TSS	108		TF_ELK,
15	GO:0005524 ATP binding	1011	at_TSS	105		TF_ELK,
16	GO:0003700 transcription factor activity	719	at_TSS,before_TSS	105	yes	TF_MAZR,
17	GO:0009653 morphogenesis	811	before_TSS	98	yes
18	GO:0007186 G-protein coupled receptor protein signaling pathway	495	after_TSS	91	yes
19	GO:0051276 chromosome organization and biogenesis	220	at_TSS,before_TSS	88	yes	many
20	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)	208	at_TSS	84	yes	many
21	GO:0009887 organ morphogenesis	674	before_TSS,after_TSS	82	yes
22	GO:0006323 DNA packaging	188	at_TSS,before_TSS	81	yes	many
23	GO:0016043 cell organization and biogenesis	839	at_TSS	79	yes
24	GO:0006325 establishment and/or maintenance of chromatin architecture	179	at_TSS,before_TSS	76	yes	many
25	GO:0007049 cell cycle	443	at_TSS	74	yes	many
26	GO:0006996 organelle organization and biogenesis	645	at_TSS	71	yes	TF_COMP, TF_PBX, TF_NFY,
27	GO:0006333 chromatin assembly or disassembly	121	at_TSS,before_TSS	62	yes	many
28	GO:0006066 alcohol metabolism	164	at_TSS	62	yes	TF_CREB, TF_TAXCREB1,
29	GO:0006461 protein complex assembly	123	at_TSS,before_TSS	57	yes	many
30	GO:0000279 M phase	122	at_TSS,before_TSS	56	yes	many
31	GO:0031497 chromatin assembly	95	at_TSS,before_TSS	54	yes	many
32	GO:0051301 cell division	134	at_TSS,before_TSS	54	yes	many
33	GO:0006334 nucleosome assembly	86	at_TSS,before_TSS	52	yes	many
34	GO:0000278 mitotic cell cycle	135	at_TSS	52	yes	many
35	GO:0030154 cell differentiation	538	at_TSS	51		TF_MAZR,
36	GO:0000910 cytokinesis	125	at_TSS,before_TSS	50	yes	many
37	GO:0048519 negative regulation of biological process	408	before_TSS	47	yes
38	GO:0007067 mitosis	88	at_TSS	45	yes	MIT_005NFY, TF_RFX, TF_NFY,
39	GO:0000087 M phase of mitotic cell cycle	89	at_TSS	45	yes	MIT_005NFY, TF_RFX, TF_NFY,
40	GO:0048523 negative regulation of cellular process	375	before_TSS	43	yes
41	GO:0007399 nervous system development	301	before_TSS	37	yes
42	GO:0016070 RNA metabolism	342	at_TSS	35	yes	TF_CREB, TF_ATF1,
43	GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	91	at_TSS	33	yes
44	GO:0007389 pattern specification	128	at_TSS,before_TSS,after_TSS	33	yes	TF_MAZR,
45	GO:0006366 transcription from RNA polymerase II promoter	231	before_TSS	32	yes
46	GO:0004497 monooxygenase activity	90	at_TSS,before_TSS	32	yes	TF_ARP1,
47	GO:0006006 glucose metabolism	71	at_TSS	29	yes
48	GO:0030182 neuron differentiation	137	at_TSS,before_TSS	29	yes	MIT_024MAZ, TF_MAZR,
49	GO:0009888 histogenesis	112	at_TSS	28	yes
50	GO:0001501 skeletal development	87	at_TSS	27	yes
51	GO:0006357 regulation of transcription from RNA polymerase II promoter	191	before_TSS	27	yes
52	GO:0009790 embryonic development	170	before_TSS	26	yes
53	GO:0006886 intracellular protein transport	350	at_TSS	23		TF_CEBP,
54	GO:0008610 lipid biosynthesis	146	at_TSS,before_TSS	22	yes	many
55	GO:0031324 negative regulation of cellular metabolism	132	before_TSS	20	yes
56	GO:0006694 steroid biosynthesis	42	at_TSS	20	yes	MIT_005NFY, TF_NFY,
57	GO:0009892 negative regulation of metabolism	149	before_TSS	20	yes
58	GO:0046849 bone remodeling	53	at_TSS	19	yes
59	GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism	121	before_TSS	19	yes
60	GO:0004386 helicase activity	108	at_TSS	19		TF_GABP, TF_ELK,
61	GO:0007417 central nervous system development	76	at_TSS,before_TSS	19	yes	TF_MAZR,
62	GO:0016125 sterol metabolism	42	at_TSS	19	yes	MIT_005NFY,
63	GO:0009719 response to endogenous stimulus	159	at_TSS	18		TF_GABP,
64	GO:0016481 negative regulation of transcription	115	before_TSS	18	yes
65	GO:0001503 ossification	48	at_TSS	18	yes
66	GO:0031214 biomineral formation	48	at_TSS	18	yes
67	GO:0043037 translation	128	at_TSS	18		TF_ATF6, TF_ARNT,
68	GO:0006281 DNA repair	133	at_TSS	17	yes	TF_ARNT,
69	GO:0051169 nuclear transport	63	at_TSS,before_TSS	17	yes	TF_SP1,
70	GO:0048666 neuron development	108	at_TSS	17		TF_MAZR,
71	GO:0019882 antigen presentation	31	at_TSS	16	yes
72	GO:0006260 DNA replication	90	at_TSS	16	yes	many
73	GO:0006913 nucleocytoplasmic transport	70	at_TSS,before_TSS	14	yes	TF_SP1,
74	GO:0016769 transferase activity, transferring nitrogenous groups	26	at_TSS	14	yes
75	GO:0007420 brain development	63	before_TSS	14	yes
76	GO:0051327 M phase of meiotic cell cycle	39	at_TSS	13	yes
77	GO:0008380 RNA splicing	154	before_TSS	13		TF_E4BP4,
78	GO:0016564 transcriptional repressor activity	64	before_TSS	13	yes
79	GO:0016055 Wnt receptor signaling pathway	81	before_TSS	13		TF_ARNT,
80	GO:0051321 meiotic cell cycle	39	at_TSS	13	yes
81	GO:0007126 meiosis	39	at_TSS	13	yes
82	GO:0042221 response to chemical substance	155	before_TSS	12		MIT_140,
83	GO:0000122 negative regulation of transcription from RNA polymerase II promoter	62	before_TSS	12	yes
84	GO:0030900 forebrain development	31	at_TSS,before_TSS	12	yes
85	GO:0016790 thiolester hydrolase activity	57	before_TSS	12	yes
86	GO:0048598 embryonic morphogenesis	62	before_TSS	12	yes	TF_MAZR,
87	GO:0006261 DNA-dependent DNA replication	32	at_TSS	11		TF_E2F,
88	GO:0015980 energy derivation by oxidation of organic compounds	115	at_TSS	11		MIT_015AP4,
89	GO:0016758 transferase activity, transferring hexosyl groups	109	before_TSS	11		TF_CDP,
90	GO:0016563 transcriptional activator activity	53	before_TSS	11	yes
91	GO:0008009 chemokine activity	32	after_TSS	10	yes
92	GO:0000398 nuclear mRNA splicing, via spliceosome	149	before_TSS	10		TF_E2F,
93	GO:0003743 translation initiation factor activity	53	at_TSS	10		TF_HTF, TF_ATF6, TF_ARNT,
94	GO:0017038 protein import	49	at_TSS	10		TF_SP1,
95	GO:0051170 nuclear import	43	at_TSS,before_TSS	10	yes	TF_SP1,
96	GO:0008238 exopeptidase activity	81	after_TSS	10	yes
97	GO:0045165 cell fate commitment	48	before_TSS	10	yes
98	GO:0042379 chemokine receptor binding	32	after_TSS	10	yes
99	GO:0006606 protein-nucleus import	43	at_TSS,before_TSS	10	yes	TF_SP1,

Pairs of TF_NFY binding sites with other TFBS

No.	TFBS	Location	Total GO-s	Main GO annotation	N pairs for main GO	Total genes for main GO
1	TF_NFY	at_TSS,before_TSS	20	GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolism	202	2284
2	MIT_005NFY	at_TSS,before_TSS	20	GO:0006259 DNA metabolism	52	427
3	TF_COMP	at_TSS,before_TSS	14	GO:0006259 DNA metabolism	48	427
4	MIT_046	at_TSS	11	GO:0051276 chromosome organization and biogenesis	22	220
5	TF_CEBP	at_TSS	10	GO:0006259 DNA metabolism	40	427
6	TF_PBX	at_TSS	10	GO:0006259 DNA metabolism	35	427
7	MIT_051TATA	at_TSS,before_TSS	9	GO:0006259 DNA metabolism	23	427
8	TF_MAZR	at_TSS,before_TSS	9	GO:0003677 DNA binding	127	1509
9	TF_OCT	at_TSS	8	GO:0051276 chromosome organization and biogenesis	17	220
10	TF_POU3F	at_TSS	8	GO:0051276 chromosome organization and biogenesis	19	220
11	TF_TATA	at_TSS	8	GO:0051276 chromosome organization and biogenesis	14	220
12	TF_SP1	at_TSS,before_TSS	8	GO:0051301 cell division	34	134
13	MIT_044OCT	at_TSS	8	GO:0051276 chromosome organization and biogenesis	14	220
14	TF_RFX	at_TSS	6	GO:0000279 M phase	16	122
15	TF_E2F	at_TSS,before_TSS	6	GO:0006259 DNA metabolism	44	427
16	TF_CREB	at_TSS	6	GO:0006333 chromatin assembly or disassembly	29	121
17	TF_ARNT	at_TSS,before_TSS	4	GO:0043037 translation	18	128
18	MIT_174	before_TSS	4	GO:0051276 chromosome organization and biogenesis	13	220
19	TF_ATF1	at_TSS	3	GO:0031497 chromatin assembly	26	95
20	TF_GABP	at_TSS	3	GO:0009719 response to endogenous stimulus	18	159
21	MIT_006SP1	at_TSS,before_TSS	3	GO:0007049 cell cycle	74	443
22	TF_ELK	at_TSS	3	GO:0030554 adenyl nucleotide binding	108	1036
23	TF_ATF6	at_TSS	2	GO:0043037 translation	17	128
24	MIT_124	at_TSS	2	GO:0051276 chromosome organization and biogenesis	12	220
25	TF_HTF	at_TSS	2	GO:0006260 DNA replication	13	90
26	TF_TAXCREB1	at_TSS	2	GO:0006066 alcohol metabolism	13	164
27	TF_AP2	at_TSS,before_TSS	2	GO:0030528 transcription regulator activity	53	941
28	MIT_069E2F	at_TSS	1	GO:0006260 DNA replication	10	90
29	TF_E4BP4	before_TSS	1	GO:0008380 RNA splicing	13	154
30	MIT_024MAZ	at_TSS	1	GO:0030182 neuron differentiation	17	137
31	TF_AP2A	at_TSS	1	GO:0019207 kinase regulator activity	10	53
32	TF_CDP	before_TSS	1	GO:0016758 transferase activity, transferring hexosyl groups	11	109
33	TF_ARP1	before_TSS	1	GO:0004497 monooxygenase activity	10	90
34	MIT_015AP4	at_TSS	1	GO:0015980 energy derivation by oxidation of organic compounds	11	115
35	TF_MYC	at_TSS	1	GO:0016829 lyase activity	10	121
36	MIT_140	before_TSS	1	GO:0042221 response to chemical substance	12	155
37	TF_AHR	at_TSS	1	GO:0000910 cytokinesis	22	125

Details on Gene Ontology terms for targets of TF_NFY

Total number of genes = 12103

No.	In pair with	Multi- ple	Conser- ved	Location	Frequency in list	U-clusters in list	Genes with TFBS in list, %	Genes with TFBS total, %	Ratio	z	p	FDR	GO annotation
1	none		yes	before_TSS	287	2537	11.3	7.4	1.52	8.459	0	0	GO:0005634
2	none	yes		at_TSS	251	2537	9.8	6.1	1.59	8.686	0	0	GO:0005634
3	none		yes	before_TSS	231	2068	11.1	7.4	1.5	7.185	0	0	GO:0050794 regulation of cellular process
4	none	yes		at_TSS	224	2284	9.8	6.1	1.58	7.945	0	0	GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolism
5	none		yes	before_TSS	223	1986	11.2	7.4	1.51	7.121	0	0	GO:0051244 regulation of cellular physiological process
6	none		yes	before_TSS	191	1541	12.3	7.4	1.67	8.01	0	0	GO:0019222 regulation of metabolism
7	none		yes	before_TSS	191	1510	12.6	7.4	1.7	8.321	0	0	GO:0031323 regulation of cellular metabolism
8	none		yes	before_TSS	190	1461	13	7.4	1.75	8.72	0	0	GO:0006350 transcription
9	none		yes	before_TSS	186	1420	13	7.4	1.76	8.724	0	0	GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
10	none		yes	before_TSS	185	1410	13.1	7.4	1.77	8.723	0	0	GO:0045449 regulation of transcription
11	none		yes	before_TSS	182	1383	13.1	7.4	1.77	8.687	0	0	GO:0006351 transcription, DNA-dependent
12	none		yes	before_TSS	180	1362	13.2	7.4	1.78	8.697	0	0	GO:0006355 regulation of transcription, DNA-dependent
13	none	yes		at_TSS	162	1509	10.7	6.1	1.73	7.816	0	0	GO:0003677 DNA binding
14	none			at_TSS	156	427	36.5	22.4	1.62	7.106	0	0	GO:0006259 DNA metabolism
15	none		yes	before_TSS	132	941	14	7.4	1.89	8.081	0	0	GO:0030528 transcription regulator activity
16	none		yes	before_TSS	105	719	14.6	7.4	1.97	7.603	0	0	GO:0003700 transcription factor activity
17	none		yes	before_TSS	98	811	12	7.4	1.63	5.27	0	0	GO:0009653 morphogenesis
18	none			after_TSS	91	495	18.3	12.1	1.51	4.352	0	0.0012	GO:0007186 G-protein coupled receptor protein signaling pathway
19	none			at_TSS	88	220	40	22.4	1.78	6.3	0	0	GO:0051276 chromosome organization and biogenesis
20	none			at_TSS	84	208	40.3	22.4	1.79	6.256	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
21	none		yes	before_TSS	82	674	12.1	7.4	1.64	4.859	0	0	GO:0009887 organ morphogenesis
22	none			at_TSS	81	188	43	22.4	1.91	6.837	0	0	GO:0006323 DNA packaging
23	none	yes		at_TSS	79	839	9.4	6.1	1.51	4.008	0	0.0224	GO:0016043 cell organization and biogenesis
24	none	yes		at_TSS	77	427	18	6.1	2.91	10.327	0	0	GO:0006259 DNA metabolism
25	none			at_TSS	76	179	42.4	22.4	1.89	6.467	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
26	none	yes		at_TSS	71	645	11	6.1	1.77	5.208	0	0	GO:0006996 organelle organization and biogenesis
27	none		yes	at_TSS	69	302	22.8	12.9	1.76	5.178	0	0	GO:0005667
28	none			at_TSS	62	121	51.2	22.4	2.28	7.631	0	0	GO:0006333 chromatin assembly or disassembly
29	none			at_TSS	62	164	37.8	22.4	1.68	4.748	0	0.0007	GO:0006066 alcohol metabolism
30	none			at_TSS	57	123	46.3	22.4	2.06	6.386	0	0	GO:0006461 protein complex assembly
31	none			at_TSS	56	122	45.9	22.4	2.04	6.242	0	0	GO:0000279 M phase
32	none			at_TSS	54	134	40.2	22.4	1.79	4.982	0	0	GO:0051301 cell division
33	none			at_TSS	54	95	56.8	22.4	2.53	8.068	0	0	GO:0031497 chromatin assembly
34	none			at_TSS	52	135	38.5	22.4	1.71	4.502	0	0.0006	GO:0000278 mitotic cell cycle
35	none			at_TSS	52	86	60.4	22.4	2.69	8.482	0	0	GO:0006334 nucleosome assembly
36	none		yes	before_TSS	52	302	17.2	7.4	2.32	6.597	0	0	GO:0005667
37	none			at_TSS	50	125	40	22.4	1.78	4.73	0	0.0002	GO:0000910 cytokinesis
38	none	yes		at_TSS	50	443	11.2	6.1	1.82	4.526	0	0.0003	GO:0007049 cell cycle
39	none			at_TSS	47	78	60.2	22.4	2.68	8.031	0	0	GO:0000786
40	none		yes	before_TSS	47	408	11.5	7.4	1.55	3.23	0.0012	0.0226	GO:0048519 negative regulation of biological process
41	none	yes		at_TSS	47	220	21.3	6.1	3.44	9.416	0	0	GO:0051276 chromosome organization and biogenesis
42	none			at_TSS	45	89	50.5	22.4	2.25	6.382	0	0	GO:0000087 M phase of mitotic cell cycle
43	none	yes		at_TSS	45	208	21.6	6.1	3.49	9.314	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
44	none			at_TSS	45	88	51.1	22.4	2.27	6.475	0	0	GO:0005694
45	none			at_TSS	45	88	51.1	22.4	2.27	6.475	0	0	GO:0007067 mitosis
46	none	yes		at_TSS	45	188	23.9	6.1	3.86	10.167	0	0	GO:0006323 DNA packaging
47	none		yes	before_TSS	43	375	11.4	7.4	1.54	3.053	0.0022	0.0376	GO:0048523 negative regulation of cellular process
48	none	yes		at_TSS	42	179	23.4	6.1	3.78	9.653	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
49	none		yes	after_TSS	40	674	5.9	3.9	1.5	2.751	0.0059	0.0381	GO:0009887 organ morphogenesis
50	none	yes		at_TSS	39	121	32.2	6.1	5.2	11.937	0	0	GO:0006333 chromatin assembly or disassembly
51	none	yes		at_TSS	38	123	30.8	6.1	4.98	11.418	0	0	GO:0006461 protein complex assembly
52	none	yes		at_TSS	37	86	43	6.1	6.94	14.214	0	0	GO:0006334 nucleosome assembly
53	none		yes	before_TSS	37	301	12.2	7.4	1.66	3.28	0.001	0.0077	GO:0007399 nervous system development
54	none	yes		at_TSS	37	95	38.9	6.1	6.28	13.291	0	0	GO:0031497 chromatin assembly
55	none	yes		at_TSS	35	342	10.2	6.1	1.65	3.141	0.0016	0.0205	GO:0016070 RNA metabolism
56	none	yes		at_TSS	34	78	43.5	6.1	7.03	13.741	0	0	GO:0000786
57	none			at_TSS	33	91	36.2	22.4	1.61	3.172	0.0015	0.0692	GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
58	none		yes	at_TSS	33	128	25.7	12.9	1.98	4.339	0	0.0006	GO:0007389 pattern specification
59	none			at_TSS	32	90	35.5	22.4	1.58	2.993	0.0027	0.0594	GO:0004497 monooxygenase activity
60	none		yes	before_TSS	32	231	13.8	7.4	1.87	3.78	0.0001	0.0095	GO:0006366 transcription from RNA polymerase II promoter
61	none	yes		at_TSS	32	88	36.3	6.1	5.86	11.779	0	0	GO:0005694
62	none			at_TSS	29	71	40.8	22.4	1.82	3.727	0.0001	0.0354	GO:0006006 glucose metabolism
63	none		yes	at_TSS	29	137	21.1	12.9	1.63	2.874	0.004	0.0872	GO:0030182 neuron differentiation
64	none		yes	at_TSS	28	112	25	12.9	1.92	3.809	0.0001	0.0102	GO:0009888 histogenesis
65	none		yes	before_TSS	27	191	14.1	7.4	1.9	3.582	0.0003	0.0311	GO:0006357 regulation of transcription from RNA polymerase II promoter
66	none		yes	at_TSS	27	87	31	12.9	2.39	5.035	0	0.0001	GO:0001501 skeletal development
67	none		yes	before_TSS	26	170	15.2	7.4	2.06	3.957	0	0.0023	GO:0009790 embryonic development
68	none	yes		at_TSS	25	122	20.4	6.1	3.3	6.581	0	0	GO:0000279 M phase
69	none	yes		at_TSS	25	134	18.6	6.1	3.01	6.015	0	0	GO:0051301 cell division
70	none	yes		at_TSS	24	125	19.2	6.1	3.09	6.061	0	0	GO:0000910 cytokinesis
71	none	yes		before_TSS	22	146	15	7.2	2.08	3.685	0.0002	0.0418	GO:0008610 lipid biosynthesis
72	none		yes	before_TSS	22	128	17.1	7.4	2.32	4.25	0	0.0002	GO:0007389 pattern specification
73	none		yes	before_TSS	20	149	13.4	7.4	1.81	2.823	0.0047	0.0757	GO:0009892 negative regulation of metabolism
74	none		yes	before_TSS	20	132	15.1	7.4	2.04	3.418	0.0006	0.0209	GO:0031324 negative regulation of cellular metabolism
75	none			at_TSS	20	42	47.6	22.4	2.12	3.917	0	0.0082	GO:0006694 steroid biosynthesis
76	none		yes	before_TSS	19	121	15.7	7.4	2.12	3.504	0.0004	0.0139	GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
77	none		yes	at_TSS	19	53	35.8	12.9	2.76	4.97	0	0.0002	GO:0046849 bone remodeling
78	none		yes	at_TSS	19	76	25	12.9	1.92	3.133	0.0017	0.0487	GO:0007417 central nervous system development
79	none			at_TSS	19	42	45.2	22.4	2.01	3.547	0.0003	0.0356	GO:0016125 sterol metabolism
80	none		yes	before_TSS	18	115	15.6	7.4	2.11	3.394	0.0006	0.0193	GO:0016481 negative regulation of transcription
81	none		yes	at_TSS	18	48	37.5	12.9	2.89	5.07	0	0.0001	GO:0001503 ossification
82	none		yes	before_TSS	18	137	13.1	7.4	1.77	2.578	0.0099	0.0845	GO:0030182 neuron differentiation
83	none		yes	before_TSS	18	123	14.6	7.4	1.97	3.078	0.002	0.0508	GO:0006461 protein complex assembly
84	none		yes	at_TSS	18	48	37.5	12.9	2.89	5.07	0	0.0001	GO:0031214 biomineral formation
85	none	yes		at_TSS	17	133	12.7	6.1	2.06	3.167	0.0015	0.0626	GO:0006281 DNA repair
86	none		yes	at_TSS	17	63	26.9	12.9	2.08	3.321	0.0008	0.082	GO:0051169 nuclear transport
87	none		yes	at_TSS	17	52	32.6	12.9	2.52	4.244	0	0.004	GO:0005875
88	none			at_TSS	16	31	51.6	22.4	2.29	3.898	0	0.0354	GO:0019882 antigen presentation
89	none		yes	before_TSS	16	76	21	7.4	2.84	4.558	0	0.0002	GO:0007417 central nervous system development
90	none		yes	at_TSS	16	51	31.3	12.9	2.42	3.921	0	0.0107	GO:0000785
91	none			at_TSS	14	26	53.8	22.4	2.39	3.842	0.0001	0.0446	GO:0016769 transferase activity, transferring nitrogenous groups
92	none	yes		before_TSS	14	70	20	7.2	2.76	4.142	0	0.0063	GO:0006913 nucleocytoplasmic transport
93	none		yes	before_TSS	14	63	22.2	7.4	3	4.504	0	0.0002	GO:0007420 brain development
94	none		yes	before_TSS	13	63	20.6	7.4	2.78	4.021	0	0.0212	GO:0051169 nuclear transport
95	none		yes	at_TSS	13	39	33.3	12.9	2.57	3.792	0.0001	0.0546	GO:0007126 meiosis
96	none		yes	before_TSS	13	64	20.3	7.4	2.74	3.954	0	0.0046	GO:0016564 transcriptional repressor activity
97	none		yes	at_TSS	13	39	33.3	12.9	2.57	3.792	0.0001	0.0546	GO:0051321 meiotic cell cycle
98	none		yes	at_TSS	13	39	33.3	12.9	2.57	3.792	0.0001	0.0546	GO:0051327 M phase of meiotic cell cycle
99	none	yes		at_TSS	13	90	14.4	6.1	2.33	3.257	0.0011	0.0412	GO:0006260 DNA replication
100	none		yes	at_TSS	12	31	38.7	12.9	2.98	4.272	0	0.007	GO:0030900 forebrain development
101	none		yes	before_TSS	12	62	19.3	7.4	2.61	3.603	0.0003	0.0287	GO:0000122 negative regulation of transcription from RNA polymerase II promoter
102	none	yes		before_TSS	12	57	21	7.2	2.91	4.043	0	0.0193	GO:0016790 thiolester hydrolase activity
103	none		yes	before_TSS	12	62	19.3	7.4	2.61	3.603	0.0003	0.0115	GO:0048598 embryonic morphogenesis
104	none	yes		before_TSS	12	63	19	7.2	2.63	3.635	0.0002	0.0339	GO:0051169 nuclear transport
105	none		yes	after_TSS	11	128	8.5	3.9	2.18	2.727	0.0063	0.0544	GO:0007389 pattern specification
106	none	yes		at_TSS	11	42	26.1	6.1	4.22	5.383	0	0	GO:0006694 steroid biosynthesis
107	none		yes	before_TSS	11	53	20.7	7.4	2.8	3.72	0.0001	0.0145	GO:0016563 transcriptional activator activity
108	none	yes		before_TSS	11	63	17.4	7.2	2.41	3.147	0.0016	0.067	GO:0007420 brain development
109	none		yes	before_TSS	10	43	23.2	7.4	3.14	3.977	0	0.0255	GO:0006606 protein-nucleus import
110	none		yes	at_TSS	10	27	37	12.9	2.85	3.727	0.0001	0.0709	GO:0019888 protein phosphatase regulator activity
111	none		yes	after_TSS	10	81	12.3	3.9	3.13	3.908	0	0.034	GO:0008238 exopeptidase activity
112	none		yes	before_TSS	10	31	32.2	7.4	4.35	5.292	0	0	GO:0030900 forebrain development
113	none		yes	before_TSS	10	48	20.8	7.4	2.81	3.56	0.0003	0.0678	GO:0045165 cell fate commitment
114	none			after_TSS	10	32	31.2	12.1	2.57	3.317	0.0009	0.0832	GO:0008009 chemokine activity
115	none		yes	before_TSS	10	43	23.2	7.4	3.14	3.977	0	0.0255	GO:0051170 nuclear import
116	none	yes		at_TSS	10	58	17.2	6.1	2.78	3.496	0.0004	0.0246	GO:0005730
117	none			after_TSS	10	32	31.2	12.1	2.57	3.317	0.0009	0.0832	GO:0042379 chemokine receptor binding
118	none	yes		at_TSS	10	42	23.8	6.1	3.84	4.742	0	0.0003	GO:0016125 sterol metabolism
119	MIT_005NFY			at_TSS	52	427	12.1	4.2	2.88	8.323	0	0	GO:0006259 DNA metabolism
120	MIT_005NFY			at_TSS	39	443	8.8	4.2	2.08	4.885	0	0.0148	GO:0007049 cell cycle
121	MIT_005NFY			at_TSS	31	220	14	4.2	3.33	7.345	0	0	GO:0051276 chromosome organization and biogenesis
122	MIT_005NFY			at_TSS	29	208	13.9	4.2	3.3	7.031	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
123	MIT_005NFY			at_TSS	29	188	15.4	4.2	3.65	7.698	0	0	GO:0006323 DNA packaging
124	MIT_005NFY			at_TSS	27	179	15	4.2	3.57	7.28	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
125	MIT_005NFY			at_TSS	25	121	20.6	4.2	4.89	9.037	0	0	GO:0006333 chromatin assembly or disassembly
126	MIT_005NFY			at_TSS	23	123	18.6	4.2	4.42	8.024	0	0	GO:0006461 protein complex assembly
127	MIT_005NFY			at_TSS	23	122	18.8	4.2	4.46	8.076	0	0	GO:0000279 M phase
128	MIT_005NFY			at_TSS	22	86	25.5	4.2	6.05	9.884	0	0	GO:0006334 nucleosome assembly
129	MIT_005NFY			at_TSS	22	95	23.1	4.2	5.48	9.213	0	0	GO:0031497 chromatin assembly
130	MIT_005NFY			at_TSS	21	78	26.9	4.2	6.37	10.001	0	0	GO:0000786
131	MIT_005NFY			at_TSS	19	134	14.1	4.2	3.35	5.763	0	0	GO:0051301 cell division
132	MIT_005NFY			at_TSS	19	88	21.5	4.2	5.11	8.131	0	0	GO:0005694
133	MIT_005NFY			at_TSS	18	89	20.2	4.2	4.79	7.534	0	0	GO:0000087 M phase of mitotic cell cycle
134	MIT_005NFY			at_TSS	18	135	13.3	4.2	3.15	5.293	0	0.0008	GO:0000278 mitotic cell cycle
135	MIT_005NFY			at_TSS	18	88	20.4	4.2	4.84	7.599	0	0	GO:0007067 mitosis
136	MIT_005NFY			at_TSS	18	125	14.4	4.2	3.41	5.687	0	0.0001	GO:0000910 cytokinesis
137	MIT_005NFY	yes		at_TSS	13	134	9.7	1.8	5.24	6.78	0	0	GO:0051301 cell division
138	MIT_005NFY			before_TSS	12	146	8.2	2.1	3.79	5.057	0	0.0092	GO:0008610 lipid biosynthesis
139	MIT_005NFY			at_TSS	12	90	13.3	4.2	3.15	4.314	0	0.0329	GO:0006260 DNA replication
140	MIT_005NFY	yes		at_TSS	12	125	9.6	1.8	5.18	6.461	0	0	GO:0000910 cytokinesis
141	MIT_005NFY			at_TSS	11	42	26.1	4.2	6.2	7.091	0	0	GO:0006694 steroid biosynthesis
142	MIT_005NFY	yes		at_TSS	11	135	8.1	1.8	4.4	5.459	0	0.0005	GO:0000278 mitotic cell cycle
143	MIT_005NFY			at_TSS	10	42	23.8	4.2	5.63	6.323	0	0	GO:0016125 sterol metabolism
144	MIT_006SP1			at_TSS	74	443	16.7	10.5	1.57	4.265	0	0.0863	GO:0007049 cell cycle
145	MIT_006SP1	yes		before_TSS	10	134	7.4	1.8	3.99	4.811	0	0.0649	GO:0051301 cell division
146	MIT_006SP1	yes		before_TSS	10	125	8	1.8	4.28	5.091	0	0.0153	GO:0000910 cytokinesis
147	MIT_015AP4			at_TSS	11	115	9.5	2.3	4.13	5.197	0	0.0087	GO:0015980 energy derivation by oxidation of organic compounds
148	MIT_024MAZ			before_TSS	31	302	10.2	4.1	2.46	5.374	0	0.0006	GO:0005667
149	MIT_024MAZ			at_TSS	17	137	12.4	4.5	2.74	4.47	0	0.0676	GO:0030182 neuron differentiation
150	MIT_044OCT			at_TSS	14	188	7.4	0.5	12.51	12.312	0	0	GO:0006323 DNA packaging
151	MIT_044OCT			at_TSS	14	95	14.7	0.5	24.77	17.994	0	0	GO:0031497 chromatin assembly
152	MIT_044OCT			at_TSS	14	179	7.8	0.5	13.14	12.665	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
153	MIT_044OCT			at_TSS	14	123	11.3	0.5	19.13	15.636	0	0	GO:0006461 protein complex assembly
154	MIT_044OCT			at_TSS	14	220	6.3	0.5	10.69	11.228	0	0	GO:0051276 chromosome organization and biogenesis
155	MIT_044OCT			at_TSS	14	208	6.7	0.5	11.31	11.607	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
156	MIT_044OCT			at_TSS	14	86	16.2	0.5	27.36	18.98	0	0	GO:0006334 nucleosome assembly
157	MIT_044OCT			at_TSS	14	78	17.9	0.5	30.17	19.994	0	0	GO:0000786
158	MIT_044OCT			at_TSS	14	121	11.5	0.5	19.44	15.777	0	0	GO:0006333 chromatin assembly or disassembly
159	MIT_046			at_TSS	22	220	10	2.3	4.18	7.463	0	0	GO:0051276 chromosome organization and biogenesis
160	MIT_046			at_TSS	21	188	11.1	2.3	4.67	7.949	0	0	GO:0006323 DNA packaging
161	MIT_046			at_TSS	21	208	10	2.3	4.22	7.344	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
162	MIT_046			at_TSS	19	179	10.6	2.3	4.44	7.262	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
163	MIT_046			at_TSS	18	121	14.8	2.3	6.22	9.042	0	0	GO:0006333 chromatin assembly or disassembly
164	MIT_046			at_TSS	18	123	14.6	2.3	6.12	8.941	0	0	GO:0006461 protein complex assembly
165	MIT_046			at_TSS	17	86	19.7	2.3	8.27	10.594	0	0	GO:0006334 nucleosome assembly
166	MIT_046			at_TSS	17	95	17.8	2.3	7.49	9.938	0	0	GO:0031497 chromatin assembly
167	MIT_046			at_TSS	17	88	19.3	2.3	8.09	10.44	0	0	GO:0005694
168	MIT_046			at_TSS	15	78	19.2	2.3	8.05	9.774	0	0	GO:0000786
169	MIT_046			at_TSS	13	134	9.7	2.3	4.06	5.576	0	0.0002	GO:0051301 cell division
170	MIT_046			at_TSS	12	135	8.8	2.3	3.72	4.975	0	0.0031	GO:0000278 mitotic cell cycle
171	MIT_046			at_TSS	12	125	9.6	2.3	4.02	5.308	0	0.0006	GO:0000910 cytokinesis
172	MIT_051TATA			at_TSS	23	427	5.3	1.2	4.43	8.012	0	0	GO:0006259 DNA metabolism
173	MIT_051TATA			at_TSS	22	220	10	1.2	8.23	12.005	0	0	GO:0051276 chromosome organization and biogenesis
174	MIT_051TATA			at_TSS	22	179	12.2	1.2	10.11	13.629	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
175	MIT_051TATA			at_TSS	22	208	10.5	1.2	8.7	12.433	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
176	MIT_051TATA			at_TSS	22	188	11.7	1.2	9.63	13.23	0	0	GO:0006323 DNA packaging
177	MIT_051TATA			at_TSS	21	123	17	1.2	14.05	16.138	0	0	GO:0006461 protein complex assembly
178	MIT_051TATA			at_TSS	21	121	17.3	1.2	14.28	16.29	0	0	GO:0006333 chromatin assembly or disassembly
179	MIT_051TATA			at_TSS	20	78	25.6	1.2	21.11	19.757	0	0	GO:0000786
180	MIT_051TATA			at_TSS	20	95	21	1.2	17.33	17.721	0	0	GO:0031497 chromatin assembly
181	MIT_051TATA			at_TSS	20	86	23.2	1.2	19.14	18.726	0	0	GO:0006334 nucleosome assembly
182	MIT_051TATA			at_TSS	17	88	19.3	1.2	15.9	15.56	0	0	GO:0005694
183	MIT_051TATA			before_TSS	13	123	10.5	3.4	3.1	4.404	0	0.0047	GO:0006461 protein complex assembly
184	MIT_051TATA	yes		at_TSS	11	208	5.2	0.1	27.82	17.029	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
185	MIT_051TATA	yes		at_TSS	11	179	6.1	0.1	32.33	18.43	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
186	MIT_051TATA	yes		at_TSS	11	86	12.7	0.1	67.3	26.925	0	0	GO:0006334 nucleosome assembly
187	MIT_051TATA	yes		at_TSS	11	95	11.5	0.1	60.93	25.587	0	0	GO:0031497 chromatin assembly
188	MIT_051TATA	yes		at_TSS	11	78	14.1	0.1	74.21	28.303	0	0	GO:0000786
189	MIT_051TATA	yes		at_TSS	11	121	9	0.1	47.83	22.593	0	0	GO:0006333 chromatin assembly or disassembly
190	MIT_051TATA	yes		at_TSS	11	188	5.8	0.1	30.78	17.961	0	0	GO:0006323 DNA packaging
191	MIT_051TATA	yes		at_TSS	11	123	8.9	0.1	47.06	22.403	0	0	GO:0006461 protein complex assembly
192	MIT_051TATA	yes		at_TSS	11	220	5	0.1	26.31	16.531	0	0	GO:0051276 chromosome organization and biogenesis
193	MIT_051TATA			before_TSS	10	86	11.6	3.4	3.41	4.22	0	0.0082	GO:0006334 nucleosome assembly
194	MIT_051TATA			before_TSS	10	95	10.5	3.4	3.09	3.843	0.0001	0.0394	GO:0031497 chromatin assembly
195	MIT_069E2F			at_TSS	10	90	11.1	0.5	20.68	13.776	0	0	GO:0006260 DNA replication
196	MIT_124			at_TSS	12	220	5.4	0.9	5.54	6.783	0	0	GO:0051276 chromosome organization and biogenesis
197	MIT_124			at_TSS	11	208	5.2	0.9	5.37	6.347	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
198	MIT_140			before_TSS	12	155	7.7	2.1	3.63	4.866	0	0.0492	GO:0042221 response to chemical substance
199	MIT_174			before_TSS	13	220	5.9	2.2	2.64	3.728	0.0001	0.0825	GO:0051276 chromosome organization and biogenesis
200	MIT_174			before_TSS	12	179	6.7	2.2	3	4.082	0	0.0207	GO:0006325 establishment and/or maintenance of chromatin architecture
201	MIT_174			before_TSS	12	188	6.3	2.2	2.86	3.885	0.0001	0.0417	GO:0006323 DNA packaging
202	MIT_174			before_TSS	11	121	9	2.2	4.07	5.135	0	0.0001	GO:0006333 chromatin assembly or disassembly
203	TF_AHR			at_TSS	22	125	17.6	6.6	2.63	4.924	0	0.004	GO:0000910 cytokinesis
204	TF_AP2			before_TSS	53	941	5.6	3.1	1.79	4.565	0	0.0071	GO:0030528 transcription regulator activity
205	TF_AP2			at_TSS	10	53	18.8	4.9	3.83	4.701	0	0.0559	GO:0019207 kinase regulator activity
206	TF_AP2A			at_TSS	10	53	18.8	4.9	3.79	4.662	0	0.0451	GO:0019207 kinase regulator activity
207	TF_ARNT			at_TSS	18	128	14	4.7	2.97	5.004	0	0.0026	GO:0043037 translation
208	TF_ARNT			at_TSS	17	133	12.7	4.7	2.7	4.402	0	0.0927	GO:0006281 DNA repair
209	TF_ARNT		yes	at_TSS	16	302	5.2	1.5	3.33	5.227	0	0.001	GO:0005667
210	TF_ARNT			before_TSS	13	81	16	5	3.16	4.523	0	0.0878	GO:0016055 Wnt receptor signaling pathway
211	TF_ARNT			at_TSS	10	53	18.8	4.7	3.99	4.862	0	0.0055	GO:0003743 translation initiation factor activity
212	TF_ARP1			before_TSS	10	90	11.1	2.4	4.51	5.314	0	0.0023	GO:0004497 monooxygenase activity
213	TF_ATF1			at_TSS	26	95	27.3	6.6	4.13	8.159	0	0	GO:0031497 chromatin assembly
214	TF_ATF1			at_TSS	26	123	21.1	6.6	3.18	6.503	0	0	GO:0006461 protein complex assembly
215	TF_ATF1	yes		at_TSS	21	342	6.1	2.3	2.56	4.593	0	0.0118	GO:0016070 RNA metabolism
216	TF_ATF6			at_TSS	17	128	13.2	4.7	2.79	4.552	0	0.0176	GO:0043037 translation
217	TF_ATF6			at_TSS	10	53	18.8	4.7	3.96	4.834	0	0.0057	GO:0003743 translation initiation factor activity
218	TF_CDP			before_TSS	11	109	10	2.7	3.62	4.657	0	0.0693	GO:0016758 transferase activity, transferring hexosyl groups
219	TF_CEBP			at_TSS	40	427	9.3	3	3.1	7.813	0	0	GO:0006259 DNA metabolism
220	TF_CEBP			at_TSS	27	188	14.3	3	4.76	9.167	0	0	GO:0006323 DNA packaging
221	TF_CEBP			at_TSS	26	220	11.8	3	3.91	7.704	0	0	GO:0051276 chromosome organization and biogenesis
222	TF_CEBP			at_TSS	25	208	12	3	3.98	7.658	0	0	GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
223	TF_CEBP			at_TSS	25	179	13.9	3	4.63	8.63	0	0	GO:0006325 establishment and/or maintenance of chromatin architecture
224	TF_CEBP			at_TSS	24	121	19.8	3	6.57	10.871	0	0	GO:0006333 chromatin assembly or disassembly
225	TF_CEBP			at_TSS	23	95	24.2	3	8.02	12.126	0	0	GO:0031497 chromatin assembly
226	TF_CEBP			at_TSS	23	86	26.7	3	8.86	12.912	0	0	GO:0006334 nucleosome assembly
227	TF_CEBP			at_TSS	23	123	18.6	3	6.2	10.222	0	0	GO:0006461 protein complex assembly
228	TF_CEBP			at_TSS	23	350	6.5	3	2.17	3.946	0	0.0817	GO:0006886 intracellular protein transport
229	TF_CEBP			at_TSS	22	78	28.2	3	9.35	13.049	0	0	GO:0000786
230	TF_CEBP			at_TSS	17	88	19.3	3	6.4	8.974	0	0	GO:0005694
231	TF_COMP			at_TSS	48	427	11.2	3.9	2.87	7.943	0	0	GO:0006259 DNA metabolism
232	TF_COMP			at_TSS	44	645	6.8	3.9	1.74	3.909	0	0.0646	GO:0006996 organelle organization and biogenesis
233	TF_COMP			at_TSS	38	443	8.5	3.9	2.19	5.152	0	0.0055	GO:0007049 cell cycle
234	TF_COMP			at_TSS	30	220	13.6	3.9	3.48	7.5	0	0	GO