CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_PAX3

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_PAX3
TF_PAX3 alone
In pair
with
1GO:0007276 gametogenesis
119
after_TSS
30
yes
 
2GO:0007283 spermatogenesis
90
after_TSS
25
yes
 
3GO:0048232 male gamete generation
90
after_TSS
25
yes
 
4GO:0015031 protein transport
476
at_TSS
24
yes
 
5GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
56
after_TSS
21
yes
 
6GO:0007179 transforming growth factor beta receptor signaling pathway
36
after_TSS
13
yes
 
7GO:0008283 cell proliferation
226
before_TSS
13
yes
 
8GO:0051301 cell division
134
after_TSS
11
 
TF_OLF1,
9GO:0000910 cytokinesis
125
after_TSS
11
 
TF_OLF1,
10GO:0009892 negative regulation of metabolism
149
at_TSS
11
yes
 
11GO:0005083 small GTPase regulator activity
110
after_TSS
11
 
MIT_006SP1,
12GO:0006397 mRNA processing
189
at_TSS
10
 
TF_HTF, TF_ATF6,
13GO:0004722 protein serine/threonine phosphatase activity
25
after_TSS
10
yes
 
14GO:0031324 negative regulation of cellular metabolism
132
at_TSS
10
yes
 
15GO:0042127 regulation of cell proliferation
139
before_TSS
10
 
TF_HTF,

Pairs of TF_PAX3 binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_OLF1
after_TSS
2
GO:0051301 cell division
11
134
2TF_HTF
at_TSS,before_TSS
2
GO:0006397 mRNA processing
10
189
3TF_ATF6
at_TSS
1
GO:0006397 mRNA processing
10
189
4MIT_006SP1
after_TSS
1
GO:0005083 small GTPase regulator activity
11
110

Details on Gene Ontology terms for targets of TF_PAX3

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
after_TSS
30
119
25.2
13.6
1.84
3.669
0.0002
0.0445
GO:0007276 gametogenesis
2none
 
yes
after_TSS
25
302
8.2
5
1.64
2.613
0.0089
0.0538
GO:0005667
3none
 
 
after_TSS
25
90
27.7
13.6
2.02
3.898
0
0.0354
GO:0007283 spermatogenesis
4none
 
 
after_TSS
25
90
27.7
13.6
2.02
3.898
0
0.0354
GO:0048232 male gamete generation
5none
 
yes
at_TSS
24
476
5
2.5
1.95
3.461
0.0005
0.0393
GO:0015031 protein transport
6none
 
 
after_TSS
21
56
37.5
13.6
2.73
5.191
0
0
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
7none
 
yes
before_TSS
13
226
5.7
2.2
2.59
3.648
0.0002
0.0193
GO:0008283 cell proliferation
8none
 
 
after_TSS
13
36
36.1
13.6
2.63
3.916
0
0.0329
GO:0007179 transforming growth factor beta receptor signaling pathway
9none
 
yes
at_TSS
11
149
7.3
2.5
2.86
3.723
0.0001
0.024
GO:0009892 negative regulation of metabolism
10none
 
 
after_TSS
10
25
40
13.6
2.91
3.828
0.0001
0.0236
GO:0004722 protein serine/threonine phosphatase activity
11none
 
 
before_TSS
10
29
34.4
12.6
2.72
3.536
0.0004
0.0743
GO:0005643
12none
 
yes
at_TSS
10
132
7.5
2.5
2.93
3.643
0.0002
0.0328
GO:0031324 negative regulation of cellular metabolism
13MIT_006SP1
 
 
after_TSS
11
110
10
2.4
4.03
5.096
0
0.0149
GO:0005083 small GTPase regulator activity
14TF_ATF6
 
 
at_TSS
10
189
5.2
1.1
4.44
5.24
0
0.0017
GO:0006397 mRNA processing
15TF_HTF
 
 
at_TSS
10
189
5.2
1.3
4
4.814
0
0.0091
GO:0006397 mRNA processing
16TF_HTF
 
 
before_TSS
10
139
7.1
1.9
3.62
4.432
0
0.0806
GO:0042127 regulation of cell proliferation
17TF_OLF1
 
 
after_TSS
11
125
8.8
1.8
4.69
5.736
0
0.0004
GO:0000910 cytokinesis
18TF_OLF1
 
 
after_TSS
11
134
8.2
1.8
4.37
5.434
0
0.0023
GO:0051301 cell division