CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_RREB

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_RREB
TF_RREB alone
In pair
with
1GO:0005102 receptor binding
406
at_TSS
32
yes
 
2GO:0000902 cellular morphogenesis
238
before_TSS
12
 
TF_SREBP,
3GO:0001747 eye development (sensu Mammalia)
22
before_TSS
10
yes
 
4GO:0043010 eye development (sensu Vertebrata)
23
before_TSS
10
yes
 

Pairs of TF_RREB binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_SREBP
before_TSS
1
GO:0000902 cellular morphogenesis
12
238

Details on Gene Ontology terms for targets of TF_RREB

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
at_TSS
32
406
7.8
4.5
1.74
3.328
0.0008
0.0228
GO:0005102 receptor binding
2none
 
 
before_TSS
10
22
45.4
13.3
3.4
4.433
0
0.0034
GO:0001747 eye development (sensu Mammalia)
3none
 
 
before_TSS
10
23
43.4
13.3
3.25
4.253
0
0.0077
GO:0043010 eye development (sensu Vertebrata)
4TF_SREBP
 
 
before_TSS
12
238
5
1.3
3.81
5.074
0
0.0168
GO:0000902 cellular morphogenesis