CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_SREBP1

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_SREBP1
TF_SREBP1 alone
In pair
with
1GO:0030528 transcription regulator activity
941
at_TSS
86
yes
 
2GO:0003700 transcription factor activity
719
at_TSS
73
yes
 
3GO:0005529 sugar binding
144
before_TSS,after_TSS
48
yes
TF_GATA,
4GO:0009607 response to biotic stimulus
483
before_TSS
40
yes
 
5GO:0008236 serine-type peptidase activity
158
at_TSS
31
yes
 
6GO:0004252 serine-type endopeptidase activity
140
at_TSS
29
yes
 
7GO:0016070 RNA metabolism
342
after_TSS
23
 
TF_CREB,
8GO:0005975 carbohydrate metabolism
308
at_TSS
21
 
TF_CREB, TF_AP2A,
9GO:0004295 trypsin activity
101
at_TSS
21
yes
 
10GO:0004263 chymotrypsin activity
90
at_TSS
20
yes
 
11GO:0007389 pattern specification
128
at_TSS
17
yes
 
12GO:0009613 response to pest, pathogen or parasite
221
before_TSS
16
 
TF_E4BP4,
13GO:0005096 GTPase activator activity
93
at_TSS
14
yes
 
14GO:0004386 helicase activity
108
after_TSS
12
 
TF_ATF1,
15GO:0005253 anion channel activity
28
at_TSS
10
yes
 
16GO:0009582 detection of abiotic stimulus
54
before_TSS
10
yes
 
17GO:0005254 chloride channel activity
25
at_TSS
10
yes
 
18GO:0009581 detection of external stimulus
57
before_TSS
10
yes
 

Pairs of TF_SREBP1 binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_CREB
at_TSS,after_TSS
2
GO:0016070 RNA metabolism
23
342
2TF_ATF1
after_TSS
1
GO:0004386 helicase activity
12
108
3TF_E4BP4
before_TSS
1
GO:0009613 response to pest, pathogen or parasite
16
221
4TF_AP2A
at_TSS
1
GO:0005975 carbohydrate metabolism
21
308
5TF_GATA
before_TSS
1
GO:0005529 sugar binding
11
144

Details on Gene Ontology terms for targets of TF_SREBP1

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
yes
at_TSS
86
941
9.1
6
1.5
4.073
0
0.0003
GO:0030528 transcription regulator activity
2none
 
yes
at_TSS
73
719
10.1
6
1.66
4.697
0
0
GO:0003700 transcription factor activity
3none
 
 
after_TSS
48
144
33.3
20.8
1.6
3.719
0.0002
0.0066
GO:0005529 sugar binding
4none
yes
 
before_TSS
40
483
8.2
5.4
1.52
2.834
0.0045
0.0934
GO:0009607 response to biotic stimulus
5none
 
 
at_TSS
31
78
39.7
11.8
3.36
7.661
0
0
GO:0005764
6none
 
 
at_TSS
31
158
19.6
11.8
1.65
3.055
0.0022
0.0633
GO:0008236 serine-type peptidase activity
7none
 
yes
at_TSS
30
302
9.9
6
1.63
2.829
0.0046
0.0294
GO:0005667
8none
 
 
at_TSS
29
140
20.7
11.8
1.75
3.276
0.001
0.0321
GO:0004252 serine-type endopeptidase activity
9none
 
 
at_TSS
21
101
20.7
11.8
1.75
2.803
0.005
0.0772
GO:0004295 trypsin activity
10none
 
 
at_TSS
20
90
22.2
11.8
1.87
3.066
0.0021
0.0345
GO:0004263 chymotrypsin activity
11none
 
yes
at_TSS
17
128
13.2
6
2.18
3.42
0.0006
0.0152
GO:0007389 pattern specification
12none
 
yes
at_TSS
14
93
15
6
2.47
3.628
0.0002
0.0522
GO:0005096 GTPase activator activity
13none
yes
 
at_TSS
10
78
12.8
1.1
10.85
9.543
0
0
GO:0005764
14none
yes
 
before_TSS
10
54
18.5
5.4
3.41
4.26
0
0.0074
GO:0009582 detection of abiotic stimulus
15none
yes
 
before_TSS
10
57
17.5
5.4
3.23
4.052
0
0.0185
GO:0009581 detection of external stimulus
16none
 
 
at_TSS
10
25
40
11.8
3.38
4.367
0
0.0046
GO:0005254 chloride channel activity
17none
 
 
at_TSS
10
28
35.7
11.8
3.02
3.919
0
0.0325
GO:0005253 anion channel activity
18MIT_002MYC
 
 
at_TSS
12
78
15.3
0.8
18.62
14.249
0
0
GO:0005764
19MIT_006SP1
 
 
at_TSS
19
78
24.3
4.3
5.62
8.719
0
0
GO:0005764
20MIT_018SREBP
 
 
at_TSS
10
78
12.8
0.6
20.15
13.577
0
0
GO:0005764
21TF_AP2A
 
 
at_TSS
21
308
6.8
2.5
2.68
4.84
0
0.028
GO:0005975 carbohydrate metabolism
22TF_ARNT
 
 
at_TSS
13
78
16.6
2.3
7
8.305
0
0
GO:0005764
23TF_ATF1
 
 
after_TSS
12
108
11.1
3.5
3.09
4.224
0
0.0691
GO:0004386 helicase activity
24TF_ATF6
 
 
at_TSS
13
78
16.6
2.2
7.55
8.722
0
0
GO:0005764
25TF_CREB
 
 
after_TSS
23
342
6.7
2.9
2.31
4.276
0
0.0548
GO:0016070 RNA metabolism
26TF_CREB
 
 
at_TSS
21
308
6.8
2.6
2.53
4.529
0
0.0512
GO:0005975 carbohydrate metabolism
27TF_E4BP4
 
 
before_TSS
16
221
7.2
2.3
3.03
4.768
0
0.0268
GO:0009613 response to pest, pathogen or parasite
28TF_GATA
 
 
before_TSS
11
144
7.6
2
3.78
4.829
0
0.0045
GO:0005529 sugar binding
29TF_HTF
 
 
at_TSS
13
78
16.6
2.2
7.47
8.66
0
0
GO:0005764
30TF_HTF
yes
 
at_TSS
10
78
12.8
0.6
20.96
13.876
0
0
GO:0005764
31TF_MYC
 
 
at_TSS
12
78
15.3
0.9
15.38
12.81
0
0
GO:0005764
32TF_SP1
 
 
at_TSS
20
78
25.6
4.7
5.35
8.647
0
0
GO:0005764