CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_TAL1

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_TAL1
TF_TAL1 alone
In pair
with
1GO:0009607 response to biotic stimulus
483
at_TSS,before_TSS
46
yes
 
2GO:0006952 defense response
463
at_TSS,before_TSS
44
yes
 
3GO:0007600 sensory perception
196
after_TSS
39
yes
 
4GO:0006955 immune response
379
at_TSS,before_TSS
37
yes
 
5GO:0030154 cell differentiation
538
before_TSS
34
yes
 
6GO:0004866 endopeptidase inhibitor activity
112
after_TSS
26
yes
 
7GO:0030414 protease inhibitor activity
112
after_TSS
26
yes
 
8GO:0009613 response to pest, pathogen or parasite
221
at_TSS,before_TSS
25
yes
 
9GO:0043207 response to external biotic stimulus
237
at_TSS,before_TSS
25
yes
 
10GO:0030246 carbohydrate binding
208
at_TSS
24
yes
 
11GO:0008236 serine-type peptidase activity
158
at_TSS
24
yes
 
12GO:0004252 serine-type endopeptidase activity
140
at_TSS
23
yes
 
13GO:0004867 serine-type endopeptidase inhibitor activity
77
after_TSS
21
yes
 
14GO:0004263 chymotrypsin activity
90
at_TSS
20
yes
 
15GO:0009611 response to wounding
180
before_TSS
20
yes
 
16GO:0004295 trypsin activity
101
at_TSS
20
yes
 
17GO:0004497 monooxygenase activity
90
after_TSS
20
yes
 
18GO:0005529 sugar binding
144
at_TSS
19
yes
 
19GO:0007606 sensory perception of chemical stimulus
40
after_TSS
16
yes
 
20GO:0007608 perception of smell
37
after_TSS
15
yes
 
21GO:0051188 cofactor biosynthesis
106
before_TSS
14
 
TF_AML,
22GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
68
before_TSS
13
 
MIT_060FOXO,
23GO:0004984 olfactory receptor activity
28
after_TSS
13
yes
 
24GO:0006954 inflammatory response
101
before_TSS
12
yes
 
25GO:0008237 metallopeptidase activity
177
before_TSS
12
 
TF_AP4,
26GO:0005200 structural constituent of cytoskeleton
74
at_TSS
11
yes
 
27GO:0016042 lipid catabolism
61
at_TSS
10
yes
 

Pairs of TF_TAL1 binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_AP4
before_TSS
1
GO:0008237 metallopeptidase activity
12
177
2MIT_060FOXO
before_TSS
1
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
13
68
3TF_AML
before_TSS
1
GO:0051188 cofactor biosynthesis
14
106

Details on Gene Ontology terms for targets of TF_TAL1

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
 
at_TSS
146
1749
8.3
5.5
1.5
5.539
0
0
GO:0005615
2none
 
 
at_TSS
46
483
9.5
5.5
1.71
3.9
0
0.0013
GO:0009607 response to biotic stimulus
3none
 
 
at_TSS
44
463
9.5
5.5
1.71
3.795
0.0001
0.0019
GO:0006952 defense response
4none
 
 
after_TSS
39
196
19.8
12.3
1.6
3.214
0.0013
0.0342
GO:0007600 sensory perception
5none
 
 
at_TSS
38
356
10.6
5.5
1.92
4.293
0
0.0005
GO:0005576
6none
 
 
at_TSS
37
379
9.7
5.5
1.76
3.646
0.0002
0.0038
GO:0006955 immune response
7none
 
yes
before_TSS
34
538
6.3
4.1
1.52
2.572
0.0101
0.0587
GO:0030154 cell differentiation
8none
yes
 
before_TSS
34
463
7.3
4.1
1.75
3.466
0.0005
0.0241
GO:0006952 defense response
9none
yes
 
before_TSS
34
483
7
4.1
1.68
3.203
0.0013
0.0497
GO:0009607 response to biotic stimulus
10none
yes
 
before_TSS
31
379
8.1
4.1
1.95
3.951
0
0.0142
GO:0006955 immune response
11none
 
 
after_TSS
26
112
23.2
12.3
1.87
3.491
0.0004
0.0146
GO:0004866 endopeptidase inhibitor activity
12none
 
 
after_TSS
26
112
23.2
12.3
1.87
3.491
0.0004
0.0146
GO:0030414 protease inhibitor activity
13none
 
 
at_TSS
25
237
10.5
5.5
1.9
3.399
0.0006
0.0082
GO:0043207 response to external biotic stimulus
14none
 
 
at_TSS
25
221
11.3
5.5
2.04
3.781
0.0001
0.0035
GO:0009613 response to pest, pathogen or parasite
15none
 
 
at_TSS
24
208
11.5
5.5
2.08
3.81
0.0001
0.0101
GO:0030246 carbohydrate binding
16none
 
 
at_TSS
24
158
15.1
5.5
2.73
5.333
0
0
GO:0008236 serine-type peptidase activity
17none
 
 
at_TSS
23
140
16.4
5.5
2.96
5.66
0
0
GO:0004252 serine-type endopeptidase activity
18none
 
 
after_TSS
21
77
27.2
12.3
2.2
3.974
0
0.0036
GO:0004867 serine-type endopeptidase inhibitor activity
19none
yes
 
before_TSS
21
237
8.8
4.1
2.11
3.635
0.0002
0.0339
GO:0043207 response to external biotic stimulus
20none
yes
 
before_TSS
21
221
9.5
4.1
2.27
3.988
0
0.0081
GO:0009613 response to pest, pathogen or parasite
21none
yes
 
before_TSS
20
180
11.1
4.1
2.65
4.68
0
0.001
GO:0009611 response to wounding
22none
 
yes
before_TSS
20
302
6.6
4.1
1.59
2.174
0.0297
0.0862
GO:0005667
23none
 
 
after_TSS
20
90
22.2
12.3
1.79
2.84
0.0045
0.0532
GO:0004497 monooxygenase activity
24none
 
 
at_TSS
20
101
19.8
5.5
3.57
6.287
0
0
GO:0004295 trypsin activity
25none
 
 
at_TSS
20
90
22.2
5.5
4
6.939
0
0
GO:0004263 chymotrypsin activity
26none
 
 
at_TSS
19
144
13.1
5.5
2.37
4.035
0
0.0066
GO:0005529 sugar binding
27none
 
 
after_TSS
16
40
40
12.3
3.22
5.307
0
0
GO:0007606 sensory perception of chemical stimulus
28none
 
 
after_TSS
15
37
40.5
12.3
3.27
5.203
0
0
GO:0007608 perception of smell
29none
 
 
after_TSS
13
28
46.4
12.3
3.74
5.471
0
0
GO:0004984 olfactory receptor activity
30none
yes
 
before_TSS
12
101
11.8
4.1
2.84
3.882
0.0001
0.0379
GO:0006954 inflammatory response
31none
 
 
at_TSS
11
74
14.8
5.5
2.68
3.514
0.0004
0.0538
GO:0005200 structural constituent of cytoskeleton
32none
 
 
at_TSS
10
61
16.3
5.5
2.95
3.712
0.0002
0.0752
GO:0016042 lipid catabolism
33MIT_060FOXO
 
 
before_TSS
13
68
19.1
5.2
3.61
5.11
0
0.0069
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
34TF_AML
 
 
before_TSS
14
106
13.2
4.1
3.19
4.707
0
0.0543
GO:0051188 cofactor biosynthesis
35TF_AP4
 
 
before_TSS
12
177
6.7
1.9
3.53
4.752
0
0.0435
GO:0008237 metallopeptidase activity