CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_TAXCREB1

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_TAXCREB1
TF_TAXCREB1 alone
In pair
with
1GO:0003700 transcription factor activity
719
after_TSS
83
yes
 
2GO:0009887 organ morphogenesis
674
at_TSS
70
yes
 
3GO:0046907 intracellular transport
478
at_TSS
42
 
TF_AHR, TF_SP1,
4GO:0007399 nervous system development
301
before_TSS,after_TSS
35
yes
 
5GO:0008104 protein localization
508
at_TSS
33
 
TF_ARNT,
6GO:0015031 protein transport
476
at_TSS
32
 
TF_ARNT,
7GO:0030154 cell differentiation
538
before_TSS
32
yes
 
8GO:0045184 establishment of protein localization
492
at_TSS
32
 
TF_ARNT,
9GO:0007049 cell cycle
443
before_TSS
31
yes
 
10GO:0016773 phosphotransferase activity, alcohol group as acceptor
553
before_TSS
31
 
TF_HTF,
11GO:0045182 translation regulator activity
90
after_TSS
28
yes
 
12GO:0045944 positive regulation of transcription from RNA polymerase II promoter
73
after_TSS
26
yes
 
13GO:0048519 negative regulation of biological process
408
before_TSS
26
yes
 
14GO:0006886 intracellular protein transport
350
at_TSS
25
 
TF_ARNT,
15GO:0006259 DNA metabolism
427
after_TSS
24
 
TF_HTF,
16GO:0043118 negative regulation of physiological process
342
before_TSS
23
yes
 
17GO:0008026 ATP-dependent helicase activity
86
at_TSS
23
yes
 
18GO:0051243 negative regulation of cellular physiological process
330
before_TSS
22
yes
 
19GO:0006512 ubiquitin cycle
390
after_TSS
21
yes
 
20GO:0051276 chromosome organization and biogenesis
220
before_TSS,after_TSS
18
 
many
21GO:0006325 establishment and/or maintenance of chromatin architecture
179
after_TSS
17
 
many
22GO:0006323 DNA packaging
188
before_TSS,after_TSS
17
 
many
23GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
208
before_TSS,after_TSS
17
 
TF_CREB, TF_ATF1, TF_MAZR,
24GO:0006366 transcription from RNA polymerase II promoter
231
after_TSS
16
 
TF_SP1,
25GO:0000398 nuclear mRNA splicing, via spliceosome
149
before_TSS
15
 
TF_SP1,
26GO:0006461 protein complex assembly
123
after_TSS
15
 
TF_ATF1, TF_HTF, TF_ATF6,
27GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
149
before_TSS
15
 
TF_SP1,
28GO:0000375 RNA splicing, via transesterification reactions
149
before_TSS
15
 
TF_SP1,
29GO:0006333 chromatin assembly or disassembly
121
after_TSS
14
 
many
30GO:0006357 regulation of transcription from RNA polymerase II promoter
191
after_TSS
14
 
TF_SP1,
31GO:0007610 behavior
229
before_TSS
13
yes
 
32GO:0006066 alcohol metabolism
164
at_TSS
13
 
TF_NFY,
33GO:0031497 chromatin assembly
95
after_TSS
12
 
TF_ATF1, TF_HTF, TF_ATF6,
34GO:0006334 nucleosome assembly
86
after_TSS
12
 
many
35GO:0008610 lipid biosynthesis
146
at_TSS
12
 
TF_NFY,
36GO:0007626 locomotory behavior
187
before_TSS
12
yes
 
37GO:0043037 translation
128
after_TSS
12
 
MIT_024MAZ,
38GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
121
before_TSS
10
 
TF_MAZR,
39GO:0008047 enzyme activator activity
127
after_TSS
10
 
MIT_056PAX4,
40GO:0016563 transcriptional activator activity
53
after_TSS
10
yes
 

Pairs of TF_TAXCREB1 binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_ATF1
after_TSS
8
GO:0051276 chromosome organization and biogenesis
18
220
2TF_HTF
before_TSS,after_TSS
8
GO:0016773 phosphotransferase activity, alcohol group as acceptor
31
553
3TF_ATF6
after_TSS
6
GO:0006333 chromatin assembly or disassembly
11
121
4TF_CREB
after_TSS
6
GO:0051276 chromosome organization and biogenesis
16
220
5TF_SP1
at_TSS,before_TSS,after_TSS
6
GO:0046907 intracellular transport
32
478
6TF_ARNT
at_TSS
4
GO:0008104 protein localization
33
508
7TF_MAZR
before_TSS
4
GO:0051276 chromosome organization and biogenesis
14
220
8TF_NFY
at_TSS
2
GO:0006066 alcohol metabolism
13
164
9MIT_152
after_TSS
2
GO:0006323 DNA packaging
10
188
10MIT_024MAZ
after_TSS
1
GO:0043037 translation
12
128
11TF_MYB
after_TSS
1
GO:0051276 chromosome organization and biogenesis
11
220
12MIT_056PAX4
after_TSS
1
GO:0008047 enzyme activator activity
10
127
13TF_AHR
at_TSS
1
GO:0046907 intracellular transport
42
478

Details on Gene Ontology terms for targets of TF_TAXCREB1

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
yes
after_TSS
83
719
11.5
7.4
1.55
4.328
0
0.0002
GO:0003700 transcription factor activity
2none
 
yes
at_TSS
70
674
10.3
6.8
1.52
3.772
0.0001
0.0013
GO:0009887 organ morphogenesis
3none
 
yes
after_TSS
35
301
11.6
7.4
1.56
2.806
0.005
0.0539
GO:0007399 nervous system development
4none
 
yes
at_TSS
34
302
11.2
6.8
1.64
3.094
0.0019
0.015
GO:0005667
5none
 
yes
after_TSS
34
302
11.2
7.4
1.51
2.563
0.0103
0.0593
GO:0005667
6none
 
yes
before_TSS
32
538
5.9
3.9
1.51
2.459
0.0139
0.0689
GO:0030154 cell differentiation
7none
 
yes
before_TSS
31
443
6.9
3.9
1.77
3.38
0.0007
0.053
GO:0007049 cell cycle
8none
 
 
after_TSS
28
90
31.1
19.3
1.6
2.837
0.0045
0.0925
GO:0045182 translation regulator activity
9none
 
yes
before_TSS
27
302
8.9
3.9
2.27
4.533
0
0
GO:0005667
10none
 
yes
before_TSS
26
408
6.3
3.9
1.62
2.578
0.0099
0.0932
GO:0048519 negative regulation of biological process
11none
 
 
after_TSS
26
73
35.6
19.3
1.84
3.53
0.0004
0.038
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
12none
 
 
at_TSS
23
86
26.7
14.6
1.82
3.18
0.0014
0.049
GO:0008026 ATP-dependent helicase activity
13none
 
yes
before_TSS
23
342
6.7
3.9
1.7
2.694
0.007
0.0783
GO:0043118 negative regulation of physiological process
14none
 
yes
before_TSS
22
330
6.6
3.9
1.69
2.59
0.0095
0.0975
GO:0051243 negative regulation of cellular physiological process
15none
yes
 
after_TSS
21
390
5.3
2.6
2.04
3.444
0.0005
0.0149
GO:0006512 ubiquitin cycle
16none
 
yes
before_TSS
20
301
6.6
3.9
1.68
2.45
0.0142
0.0629
GO:0007399 nervous system development
17none
yes
 
after_TSS
17
288
5.9
2.6
2.23
3.502
0.0004
0.0338
GO:0005794
18none
yes
 
before_TSS
13
229
5.6
2.5
2.25
3.077
0.002
0.0765
GO:0007610 behavior
19none
yes
 
before_TSS
12
187
6.4
2.5
2.54
3.426
0.0006
0.0373
GO:0007626 locomotory behavior
20none
 
yes
after_TSS
10
53
18.8
7.4
2.53
3.178
0.0014
0.0678
GO:0016563 transcriptional activator activity
21MIT_024MAZ
 
 
after_TSS
12
128
9.3
2.6
3.53
4.758
0
0.0211
GO:0043037 translation
22MIT_056PAX4
 
 
after_TSS
10
127
7.8
1.8
4.16
4.973
0
0.0284
GO:0008047 enzyme activator activity
23MIT_152
 
 
after_TSS
10
179
5.5
0.3
15.36
11.697
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
24MIT_152
 
 
after_TSS
10
188
5.3
0.3
14.63
11.378
0
0
GO:0006323 DNA packaging
25TF_AHR
 
 
at_TSS
42
478
8.7
4.3
2.02
4.871
0
0.0023
GO:0046907 intracellular transport
26TF_AHR
 
 
at_TSS
12
53
22.6
4.3
5.21
6.555
0
0
GO:0019866
27TF_ARNT
 
 
at_TSS
33
508
6.4
3
2.09
4.515
0
0.0094
GO:0008104 protein localization
28TF_ARNT
 
 
at_TSS
32
492
6.5
3
2.09
4.45
0
0.0103
GO:0045184 establishment of protein localization
29TF_ARNT
 
 
at_TSS
32
476
6.7
3
2.16
4.655
0
0.0045
GO:0015031 protein transport
30TF_ARNT
 
 
at_TSS
25
350
7.1
3
2.3
4.431
0
0.0126
GO:0006886 intracellular protein transport
31TF_ATF1
 
 
after_TSS
18
220
8.1
3.2
2.52
4.179
0
0.0191
GO:0051276 chromosome organization and biogenesis
32TF_ATF1
 
 
after_TSS
17
188
9
3.2
2.79
4.53
0
0.0042
GO:0006323 DNA packaging
33TF_ATF1
 
 
after_TSS
17
208
8.1
3.2
2.52
4.054
0
0.0319
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
34TF_ATF1
 
 
after_TSS
17
179
9.4
3.2
2.93
4.764
0
0.0013
GO:0006325 establishment and/or maintenance of chromatin architecture
35TF_ATF1
 
 
after_TSS
15
123
12.1
3.2
3.76
5.639
0
0
GO:0006461 protein complex assembly
36TF_ATF1
 
 
after_TSS
14
121
11.5
3.2
3.57
5.202
0
0.0001
GO:0006333 chromatin assembly or disassembly
37TF_ATF1
 
 
after_TSS
13
88
14.7
3.2
4.56
6.133
0
0
GO:0005694
38TF_ATF1
 
 
after_TSS
12
95
12.6
3.2
3.9
5.191
0
0.0001
GO:0031497 chromatin assembly
39TF_ATF1
 
 
after_TSS
12
86
13.9
3.2
4.3
5.632
0
0
GO:0006334 nucleosome assembly
40TF_ATF1
 
 
after_TSS
12
78
15.3
3.2
4.75
6.078
0
0
GO:0000786
41TF_ATF6
 
 
after_TSS
11
88
12.5
2.4
5.14
6.158
0
0
GO:0005694
42TF_ATF6
 
 
after_TSS
11
123
8.9
2.4
3.68
4.716
0
0.0014
GO:0006461 protein complex assembly
43TF_ATF6
 
 
after_TSS
11
121
9
2.4
3.74
4.783
0
0.001
GO:0006333 chromatin assembly or disassembly
44TF_ATF6
 
yes
after_TSS
10
188
5.3
0.7
7.48
7.581
0
0
GO:0006323 DNA packaging
45TF_ATF6
 
yes
after_TSS
10
179
5.5
0.7
7.86
7.824
0
0
GO:0006325 establishment and/or maintenance of chromatin architecture
46TF_ATF6
 
 
after_TSS
10
78
12.8
2.4
5.27
5.98
0
0
GO:0000786
47TF_ATF6
 
 
after_TSS
10
86
11.6
2.4
4.78
5.56
0
0
GO:0006334 nucleosome assembly
48TF_ATF6
 
 
after_TSS
10
95
10.5
2.4
4.33
5.146
0
0.0001
GO:0031497 chromatin assembly
49TF_CREB
 
 
after_TSS
16
220
7.2
2.7
2.66
4.178
0
0.0189
GO:0051276 chromosome organization and biogenesis
50TF_CREB
 
 
after_TSS
15
179
8.3
2.7
3.07
4.678
0
0.002
GO:0006325 establishment and/or maintenance of chromatin architecture
51TF_CREB
 
 
after_TSS
15
188
7.9
2.7
2.92
4.456
0
0.0057
GO:0006323 DNA packaging
52TF_CREB
 
 
after_TSS
15
208
7.2
2.7
2.64
4.006
0
0.0386
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
53TF_CREB
 
 
after_TSS
13
121
10.7
2.7
3.94
5.442
0
0
GO:0006333 chromatin assembly or disassembly
54TF_CREB
 
 
after_TSS
12
88
13.6
2.7
5
6.306
0
0
GO:0005694
55TF_CREB
 
 
after_TSS
11
78
14.1
2.7
5.17
6.188
0
0
GO:0000786
56TF_CREB
 
 
after_TSS
11
86
12.7
2.7
4.69
5.751
0
0
GO:0006334 nucleosome assembly
57TF_HTF
 
 
before_TSS
31
553
5.6
2.5
2.19
4.658
0
0.0459
GO:0016773 phosphotransferase activity, alcohol group as acceptor
58TF_HTF
 
 
after_TSS
24
427
5.6
2.6
2.11
3.886
0.0001
0.0677
GO:0006259 DNA metabolism
59TF_HTF
 
 
after_TSS
14
179
7.8
2.6
2.94
4.335
0
0.0096
GO:0006325 establishment and/or maintenance of chromatin architecture
60TF_HTF
 
 
after_TSS
14
188
7.4
2.6
2.8
4.123
0
0.0244
GO:0006323 DNA packaging
61TF_HTF
 
 
after_TSS
12
123
9.7
2.6
3.67
4.928
0
0.0005
GO:0006461 protein complex assembly
62TF_HTF
 
 
after_TSS
12
88
13.6
2.6
5.14
6.435
0
0
GO:0005694
63TF_HTF
 
 
after_TSS
11
121
9
2.6
3.42
4.429
0
0.0055
GO:0006333 chromatin assembly or disassembly
64TF_HTF
 
 
after_TSS
10
95
10.5
2.6
3.96
4.794
0
0.001
GO:0031497 chromatin assembly
65TF_HTF
 
 
after_TSS
10
86
11.6
2.6
4.38
5.198
0
0.0001
GO:0006334 nucleosome assembly
66TF_HTF
 
 
after_TSS
10
78
12.8
2.6
4.83
5.606
0
0
GO:0000786
67TF_MAZR
 
 
before_TSS
14
220
6.3
2.4
2.55
3.726
0.0001
0.0824
GO:0051276 chromosome organization and biogenesis
68TF_MAZR
 
 
before_TSS
14
208
6.7
2.4
2.7
3.964
0
0.0335
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)
69TF_MAZR
 
 
before_TSS
13
188
6.9
2.4
2.78
3.929
0
0.0357
GO:0006323 DNA packaging
70TF_MAZR
 
 
before_TSS
10
121
8.2
2.4
3.32
4.101
0
0.0808
GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism
71TF_MYB
 
 
after_TSS
11
220
5
1.4
3.51
4.525
0
0.0045
GO:0051276 chromosome organization and biogenesis
72TF_NFY
 
 
at_TSS
13
164
7.9
2.3
3.41
4.798
0
0.0692
GO:0006066 alcohol metabolism
73TF_NFY
 
 
at_TSS
12
146
8.2
2.3
3.54
4.76
0
0.0836
GO:0008610 lipid biosynthesis
74TF_SP1
yes
 
at_TSS
32
478
6.6
3.3
1.97
4.077
0
0.0635
GO:0046907 intracellular transport
75TF_SP1
yes
 
after_TSS
16
231
6.9
1.8
3.81
5.868
0
0.0001
GO:0006366 transcription from RNA polymerase II promoter
76TF_SP1
 
 
before_TSS
15
149
10
3.6
2.75
4.19
0
0.0861
GO:0000375 RNA splicing, via transesterification reactions
77TF_SP1
 
 
before_TSS
15
149
10
3.6
2.75
4.19
0
0.0861
GO:0000398 nuclear mRNA splicing, via spliceosome
78TF_SP1
 
 
before_TSS
15
149
10
3.6
2.75
4.19
0
0.0861
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
79TF_SP1
yes
 
after_TSS
14
191
7.3
1.8
4.03
5.747
0
0.0003
GO:0006357 regulation of transcription from RNA polymerase II promoter