CisView Mouse (mm6, March 2005)

Main Gene Ontology terms for targets of TF_ZID

No.GO annotation
Total
genes
with GO
Location
Max no. of
genes with
TF_ZID
TF_ZID alone
In pair
with
1GO:0003677 DNA binding
1509
before_TSS
102
yes
 
2GO:0048513 organ development
852
after_TSS
86
yes
 
3GO:0009887 organ morphogenesis
674
before_TSS,after_TSS
70
yes
 
4GO:0030528 transcription regulator activity
941
before_TSS
61
yes
 
5GO:0003700 transcription factor activity
719
at_TSS,before_TSS
49
yes
 
6GO:0016310 phosphorylation
549
after_TSS
44
 
TF_AP2A,
7GO:0030154 cell differentiation
538
before_TSS
36
yes
TF_MAZR,
8GO:0007399 nervous system development
301
before_TSS,after_TSS
33
yes
 
9GO:0042578 phosphoric ester hydrolase activity
222
after_TSS
29
yes
 
10GO:0016791 phosphoric monoester hydrolase activity
171
after_TSS
24
yes
 
11GO:0051243 negative regulation of cellular physiological process
330
before_TSS
23
yes
 
12GO:0006512 ubiquitin cycle
390
before_TSS
20
 
TF_POU3F,
13GO:0048468 cell development
162
before_TSS
20
yes
TF_MAZR,
14GO:0004721 phosphoprotein phosphatase activity
118
after_TSS
17
yes
 
15GO:0007389 pattern specification
128
after_TSS
17
yes
 
16GO:0048666 neuron development
108
before_TSS
16
 
TF_CP2, TF_MAZR,
17GO:0030182 neuron differentiation
137
before_TSS
16
 
TF_MAZR,
18GO:0031175 neurite morphogenesis
96
before_TSS
14
 
TF_MAZR,
19GO:0048667 neuron morphogensis during differentiation
96
before_TSS
14
 
TF_MAZR,
20GO:0000904 cellular morphogenesis during differentiation
107
before_TSS
14
 
TF_MAZR,
21GO:0042623 ATPase activity, coupled
256
at_TSS
14
 
TF_HTF,
22GO:0016887 ATPase activity
280
at_TSS
14
 
TF_HTF,
23GO:0051186 cofactor metabolism
181
after_TSS
14
 
TF_HTF,
24GO:0006813 potassium ion transport
135
after_TSS
12
 
MIT_024MAZ,
25GO:0007409 axonogenesis
81
before_TSS
11
 
TF_MAZR,
26GO:0004386 helicase activity
108
at_TSS
10
 
TF_HTF,

Pairs of TF_ZID binding sites with other TFBS

No.TFBS
Location
Total GO-s
Main GO annotation
N pairs for
main GO
Total genes
for main GO
1TF_MAZR
before_TSS
8
GO:0030154 cell differentiation
36
538
2TF_HTF
at_TSS,after_TSS
4
GO:0016887 ATPase activity
14
280
3MIT_024MAZ
after_TSS
1
GO:0006813 potassium ion transport
12
135
4TF_CP2
before_TSS
1
GO:0048666 neuron development
11
108
5TF_AP2A
after_TSS
1
GO:0016310 phosphorylation
44
549
6TF_POU3F
before_TSS
1
GO:0006512 ubiquitin cycle
20
390

Details on Gene Ontology terms for targets of TF_ZID

Total number of genes = 12103
No.In pair
with
Multi-
ple
Conser-
ved
Location
Frequency
in list
U-clusters
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
GO annotation
1none
 
yes
before_TSS
102
1509
6.7
4
1.66
5.687
0
0
GO:0003677 DNA binding
2none
 
yes
after_TSS
86
852
10
6.7
1.5
4.095
0
0.001
GO:0048513 organ development
3none
 
yes
after_TSS
70
674
10.3
6.7
1.54
3.926
0
0.0013
GO:0009887 organ morphogenesis
4none
 
yes
before_TSS
61
941
6.4
4
1.59
3.927
0
0.0003
GO:0030528 transcription regulator activity
5none
 
yes
before_TSS
49
719
6.8
4
1.67
3.865
0.0001
0.0005
GO:0003700 transcription factor activity
6none
 
yes
before_TSS
42
674
6.2
4
1.53
2.944
0.0032
0.0114
GO:0009887 organ morphogenesis
7none
 
yes
at_TSS
36
719
5
3.2
1.54
2.777
0.0054
0.022
GO:0003700 transcription factor activity
8none
 
yes
before_TSS
34
538
6.3
4
1.55
2.721
0.0065
0.0433
GO:0030154 cell differentiation
9none
 
yes
after_TSS
33
301
10.9
6.7
1.63
2.987
0.0028
0.0355
GO:0007399 nervous system development
10none
 
yes
after_TSS
33
302
10.9
6.7
1.62
2.967
0.003
0.02
GO:0005667
11none
 
yes
after_TSS
29
222
13
6.7
1.94
3.819
0.0001
0.0245
GO:0042578 phosphoric ester hydrolase activity
12none
 
yes
before_TSS
27
302
8.9
4
2.2
4.356
0
0.0001
GO:0005667
13none
 
yes
before_TSS
26
301
8.6
4
2.12
4.079
0
0.0006
GO:0007399 nervous system development
14none
 
yes
after_TSS
24
171
14
6.7
2.09
3.856
0.0001
0.0421
GO:0016791 phosphoric monoester hydrolase activity
15none
 
yes
before_TSS
23
330
6.9
4
1.71
2.719
0.0065
0.0726
GO:0051243 negative regulation of cellular physiological process
16none
 
yes
after_TSS
17
118
14.4
6.7
2.14
3.358
0.0007
0.0478
GO:0004721 phosphoprotein phosphatase activity
17none
 
yes
after_TSS
17
128
13.2
6.7
1.97
2.987
0.0028
0.0264
GO:0007389 pattern specification
18none
 
yes
before_TSS
13
162
8
4
1.97
2.577
0.0099
0.0911
GO:0048468 cell development
19none
 
yes
after_TSS
11
54
20.3
6.7
3.03
4.021
0
0.0106
GO:0005882
20MIT_015AP4
 
 
before_TSS
22
288
7.6
2.9
2.54
4.671
0
0.0647
GO:0005794
21MIT_017IRF
 
 
before_TSS
10
88
11.3
3.1
3.58
4.399
0
0.0046
GO:0005694
22MIT_024MAZ
 
 
after_TSS
12
135
8.8
2.4
3.58
4.817
0
0.0629
GO:0006813 potassium ion transport
23TF_AP2A
 
 
after_TSS
44
549
8
4.2
1.89
4.494
0
0.0503
GO:0016310 phosphorylation
24TF_CP2
 
 
before_TSS
11
108
10.1
2.8
3.62
4.659
0
0.0686
GO:0048666 neuron development
25TF_HTF
 
 
after_TSS
14
181
7.7
2.6
2.9
4.274
0
0.0638
GO:0051186 cofactor metabolism
26TF_HTF
 
 
at_TSS
14
280
5
1.5
3.32
4.863
0
0.0124
GO:0016887 ATPase activity
27TF_HTF
 
 
at_TSS
14
256
5.4
1.5
3.63
5.268
0
0.0019
GO:0042623 ATPase activity, coupled
28TF_HTF
 
 
at_TSS
10
108
9.2
1.5
6.15
6.651
0
0
GO:0004386 helicase activity
29TF_MAZR
 
 
before_TSS
36
538
6.6
3.1
2.12
4.797
0
0.0116
GO:0030154 cell differentiation
30TF_MAZR
 
 
before_TSS
20
162
12.3
3.1
3.91
6.734
0
0
GO:0048468 cell development
31TF_MAZR
 
 
before_TSS
16
108
14.8
3.1
4.69
6.96
0
0
GO:0048666 neuron development
32TF_MAZR
 
 
before_TSS
16
137
11.6
3.1
3.7
5.738
0
0.0004
GO:0030182 neuron differentiation
33TF_MAZR
 
 
before_TSS
14
107
13
3.1
4.14
5.899
0
0.0001
GO:0000904 cellular morphogenesis during differentiation
34TF_MAZR
 
 
before_TSS
14
96
14.5
3.1
4.62
6.429
0
0
GO:0031175 neurite morphogenesis
35TF_MAZR
 
 
before_TSS
14
96
14.5
3.1
4.62
6.429
0
0
GO:0048667 neuron morphogensis during differentiation
36TF_MAZR
 
 
before_TSS
11
81
13.5
3.1
4.3
5.383
0
0.0031
GO:0007409 axonogenesis
37TF_POU3F
 
 
before_TSS
20
390
5.1
2.1
2.37
4.106
0
0.0915
GO:0006512 ubiquitin cycle