CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0016070 RNA metabolism

Number of genes with GO:0016070 = 342
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_HOGNESSnone
0
0
before_TSS
60
17.5
8.3
2.1
6.239
0
0
2ADD_MTF1Anone
0
0
at_TSS
31
9
5.5
1.63
2.885
0.0039
0.0421
3MIT_001NRF1none
0
0
at_TSS
71
20.7
9.9
2.09
6.807
0
0
4MIT_001NRF1none
0
0
after_TSS
33
9.6
3.8
2.52
5.709
0
0
5MIT_002MYCnone
0
0
after_TSS
53
15.4
7.8
1.98
5.367
0
0
6MIT_003ELKnone
0
0
at_TSS
101
29.5
13.4
2.19
8.848
0
0
7MIT_003ELKnone
0
0
after_TSS
65
19
9
2.09
6.472
0
0
8MIT_004none
0
0
at_TSS
20
5.8
3.3
1.74
2.597
0.0094
0.0839
9MIT_010YY1none
0
0
after_TSS
34
9.9
4.1
2.39
5.45
0
0
10MIT_010YY1none
0
0
at_TSS
34
9.9
3.8
2.58
5.953
0
0
11MIT_011GABPnone
0
0
at_TSS
60
17.5
8.1
2.14
6.427
0
0
12MIT_011GABPnone
0
0
after_TSS
38
11.1
5.6
1.98
4.494
0
0.0001
13MIT_020E4F1none
0
0
at_TSS
51
14.9
9.2
1.61
3.69
0.0002
0.0031
14MIT_021none
0
0
at_TSS
45
13.1
6.6
1.97
4.88
0
0
15MIT_021none
0
0
after_TSS
45
13.1
6.6
1.97
4.88
0
0
16MIT_022none
0
0
at_TSS
62
18.1
9.3
1.93
5.623
0
0
17MIT_022none
0
0
after_TSS
40
11.6
6.8
1.7
3.599
0.0003
0.0058
18MIT_030none
0
0
at_TSS
47
13.7
8.2
1.66
3.726
0.0001
0.0028
19MIT_039none
0
0
at_TSS
24
7
2.7
2.59
4.993
0
0
20MIT_048NFKBnone
0
0
at_TSS
18
5.2
2.2
2.38
3.904
0
0.0015
21MIT_069E2Fnone
0
0
after_TSS
20
5.8
3
1.9
3.015
0.0025
0.0376
22MIT_069E2Fnone
0
0
before_TSS
19
5.5
2.4
2.28
3.809
0.0001
0.0072
23MIT_096none
0
0
at_TSS
19
5.5
1.7
3.11
5.343
0
0
24MIT_106none
0
0
at_TSS
20
5.8
1.8
3.09
5.446
0
0
25MIT_124none
0
0
at_TSS
18
5.2
2.8
1.85
2.732
0.0062
0.0622
26MIT_157none
0
0
after_TSS
21
6.1
1.9
3.09
5.594
0
0
27MIT_157none
0
0
at_TSS
19
5.5
1.7
3.24
5.563
0
0
28NCBI_003none
0
0
before_TSS
41
11.9
6.4
1.86
4.252
0
0.0038
29TF_ATF6none
0
0
at_TSS
134
39.1
25.3
1.54
5.939
0
0
30TF_CREBnone
1
0
after_TSS
45
13.1
8.4
1.55
3.166
0.0015
0.0235
31TF_E2Fnone
1
0
before_TSS
26
7.6
3.6
2.06
3.913
0
0.0055
32TF_ELKnone
0
0
at_TSS
197
57.6
36
1.59
8.435
0
0
33TF_ELKnone
1
0
at_TSS
109
31.8
13.5
2.36
10.084
0
0
34TF_ELKnone
1
0
after_TSS
93
27.1
14
1.93
7.073
0
0
35TF_ELKnone
1
0
before_TSS
77
22.5
14.9
1.5
3.955
0
0.007
36TF_ETSnone
0
0
at_TSS
140
40.9
22.7
1.79
8.12
0
0
37TF_GABPnone
0
0
at_TSS
156
45.6
25.9
1.75
8.396
0
0
38TF_GABPnone
1
0
after_TSS
44
12.8
5.8
2.2
5.639
0
0
39TF_GABPnone
1
0
before_TSS
37
10.8
6.6
1.62
3.121
0.0018
0.0659
40TF_GABPnone
1
1
at_TSS
25
7.3
2.9
2.49
4.881
0
0.0003
41TF_HLFnone
0
0
at_TSS
37
10.8
5.2
2.07
4.74
0
0
42TF_MYCnone
0
0
after_TSS
75
21.9
13.6
1.6
4.496
0
0.0001
43TF_NFYnone
1
0
at_TSS
35
10.2
6.1
1.65
3.141
0.0016
0.0205
44TF_YY1none
0
0
after_TSS
88
25.7
15.8
1.62
5.055
0
0
45TF_YY1none
0
0
at_TSS
74
21.6
9.8
2.19
7.413
0
0