CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0016071 mRNA metabolism

Number of genes with GO:0016071 = 202
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_HOGNESSnone
0
0
before_TSS
40
19.8
8.3
2.37
5.937
0
0
2ADD_SMADnone
1
0
after_TSS
26
12.8
7.2
1.77
3.109
0.0018
0.0274
3ADD_TANTIGENnone
0
0
before_TSS
38
18.8
11.1
1.68
3.481
0.0004
0.0304
4MIT_001NRF1none
0
0
at_TSS
42
20.7
9.9
2.09
5.216
0
0
5MIT_001NRF1none
0
0
after_TSS
19
9.4
3.8
2.46
4.18
0
0.0008
6MIT_002MYCnone
0
0
after_TSS
26
12.8
7.8
1.64
2.699
0.0069
0.0821
7MIT_003ELKnone
0
0
at_TSS
52
25.7
13.4
1.91
5.167
0
0
8MIT_003ELKnone
0
0
after_TSS
42
20.7
9
2.28
5.835
0
0
9MIT_010YY1none
0
0
after_TSS
23
11.3
4.1
2.74
5.202
0
0
10MIT_010YY1none
0
0
at_TSS
23
11.3
3.8
2.96
5.625
0
0
11MIT_011GABPnone
0
0
at_TSS
31
15.3
8.1
1.87
3.76
0.0001
0.0041
12MIT_011GABPnone
0
0
after_TSS
27
13.3
5.6
2.38
4.839
0
0
13MIT_021none
0
0
after_TSS
33
16.3
6.6
2.45
5.554
0
0
14MIT_021none
0
0
at_TSS
25
12.3
6.6
1.85
3.279
0.001
0.0173
15MIT_022none
0
0
at_TSS
34
16.8
9.3
1.79
3.659
0.0002
0.0054
16MIT_030none
0
0
at_TSS
29
14.3
8.2
1.73
3.166
0.0015
0.0235
17MIT_039none
0
0
at_TSS
16
7.9
2.7
2.93
4.613
0
0.0001
18MIT_062none
0
1
after_TSS
11
5.4
1.8
3.02
3.927
0
0.0157
19MIT_069E2Fnone
0
0
before_TSS
16
7.9
2.4
3.26
5.112
0
0
20MIT_081none
0
0
after_TSS
47
23.2
15.2
1.52
3.175
0.0014
0.0228
21MIT_096none
0
0
at_TSS
11
5.4
1.7
3.05
3.963
0
0.0022
22MIT_102none
0
0
after_TSS
16
7.9
4.1
1.91
2.72
0.0065
0.0796
23MIT_102none
0
0
at_TSS
11
5.4
2
2.59
3.346
0.0008
0.015
24MIT_103none
0
0
after_TSS
11
5.4
1.7
3.13
4.072
0
0.0011
25MIT_106none
0
0
at_TSS
14
6.9
1.8
3.66
5.3
0
0
26MIT_116none
0
0
after_TSS
15
7.4
3.7
1.99
2.799
0.0051
0.0721
27MIT_123none
0
0
after_TSS
11
5.4
2.4
2.21
2.759
0.0057
0.0757
28MIT_138none
0
0
at_TSS
11
5.4
2.4
2.22
2.783
0.0053
0.073
29MIT_157none
0
0
after_TSS
16
7.9
1.9
3.99
6.104
0
0
30MIT_157none
0
0
at_TSS
13
6.4
1.7
3.76
5.223
0
0
31NCBI_003none
0
0
before_TSS
28
13.8
6.4
2.15
4.343
0
0.0012
32TF_ATF1none
1
0
at_TSS
33
16.3
8.8
1.85
3.807
0.0001
0.0036
33TF_CREBnone
1
0
before_TSS
47
23.2
14.7
1.57
3.422
0.0006
0.0325
34TF_E2Fnone
1
0
before_TSS
20
9.9
3.6
2.69
4.74
0
0.0002
35TF_ELKnone
1
0
after_TSS
62
30.6
14
2.18
6.846
0
0
36TF_ELKnone
1
0
at_TSS
59
29.2
13.5
2.16
6.587
0
0
37TF_ELKnone
1
0
before_TSS
48
23.7
14.9
1.58
3.523
0.0004
0.0312
38TF_ETSnone
0
0
at_TSS
76
37.6
22.7
1.65
5.072
0
0
39TF_ETSnone
1
0
after_TSS
16
7.9
3.2
2.43
3.767
0.0001
0.0035
40TF_GABPnone
0
0
after_TSS
95
47
29.4
1.59
5.525
0
0
41TF_GABPnone
0
0
at_TSS
83
41
25.9
1.58
4.936
0
0
42TF_GABPnone
1
0
after_TSS
32
15.8
5.8
2.71
6.129
0
0
43TF_MYBnone
0
1
after_TSS
29
14.3
6.5
2.18
4.498
0
0.0025
44TF_MYCnone
0
1
after_TSS
22
10.8
5.5
1.97
3.386
0.0007
0.0865
45TF_PAX4none
1
0
after_TSS
14
6.9
2.4
2.77
4.075
0
0.0012
46TF_POLYAnone
1
0
before_TSS
28
13.8
7.9
1.74
3.127
0.0017
0.0807
47TF_YY1none
0
0
after_TSS
55
27.2
15.8
1.71
4.449
0
0.0002
48TF_YY1none
0
0
at_TSS
51
25.2
9.8
2.56
7.399
0
0