CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile

Number of genes with GO:0000377 = 149
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_HOGNESSnone
0
0
before_TSS
31
20.8
8.3
2.49
5.533
0
0
2ADD_SMADnone
0
0
after_TSS
46
30.8
20.5
1.5
3.147
0.0016
0.0274
3ADD_SMADnone
1
0
after_TSS
21
14
7.2
1.94
3.244
0.0011
0.0227
4ADD_TANTIGENnone
0
0
before_TSS
30
20.1
11.1
1.8
3.499
0.0004
0.0244
5MIT_001NRF1none
0
0
at_TSS
31
20.8
9.9
2.09
4.475
0
0.0004
6MIT_001NRF1none
0
0
after_TSS
17
11.4
3.8
2.98
4.866
0
0
7MIT_003ELKnone
0
0
at_TSS
35
23.4
13.4
1.74
3.617
0.0002
0.0077
8MIT_003ELKnone
0
0
after_TSS
33
22.1
9
2.43
5.579
0
0
9MIT_004none
0
0
before_TSS
10
6.7
2.4
2.7
3.343
0.0008
0.0379
10MIT_010YY1none
0
0
after_TSS
16
10.7
4.1
2.58
4.059
0
0.0016
11MIT_010YY1none
0
0
at_TSS
15
10
3.8
2.62
3.977
0
0.0025
12MIT_011GABPnone
0
0
after_TSS
21
14
5.6
2.51
4.535
0
0.0002
13MIT_021none
0
0
after_TSS
24
16.1
6.6
2.41
4.647
0
0.0001
14MIT_021none
0
0
at_TSS
20
13.4
6.6
2.01
3.325
0.0008
0.0215
15MIT_022none
0
0
at_TSS
29
19.4
9.3
2.07
4.243
0
0.0011
16MIT_030none
0
0
at_TSS
23
15.4
8.2
1.86
3.195
0.0013
0.0319
17MIT_039none
0
0
at_TSS
13
8.7
2.7
3.22
4.562
0
0.0003
18MIT_062none
0
0
after_TSS
16
10.7
5.5
1.94
2.806
0.005
0.0706
19MIT_062none
0
0
at_TSS
12
8
2.8
2.8
3.817
0.0001
0.0041
20MIT_069E2Fnone
0
0
before_TSS
13
8.7
2.4
3.59
5.022
0
0
21MIT_081none
0
0
after_TSS
38
25.5
15.2
1.66
3.483
0.0004
0.01
22MIT_102none
0
0
after_TSS
13
8.7
4.1
2.1
2.827
0.0046
0.0716
23MIT_102none
0
0
at_TSS
10
6.7
2
3.19
3.952
0
0.0025
24MIT_106none
0
0
at_TSS
11
7.3
1.8
3.9
4.949
0
0
25MIT_157none
0
0
after_TSS
14
9.3
1.9
4.73
6.53
0
0
26MIT_157none
0
0
at_TSS
12
8
1.7
4.7
6.008
0
0
27NCBI_003none
0
0
before_TSS
26
17.4
6.4
2.71
5.519
0
0
28TF_AHRnone
1
0
at_TSS
30
20.1
12.1
1.65
2.979
0.0028
0.0557
29TF_AP2Anone
1
0
after_TSS
55
36.9
24.4
1.5
3.556
0.0003
0.0081
30TF_ARNTnone
0
0
after_TSS
88
59
38.9
1.51
5.058
0
0
31TF_ATF1none
1
0
at_TSS
24
16.1
8.8
1.82
3.163
0.0015
0.0336
32TF_CREBnone
1
0
before_TSS
36
24.1
14.7
1.63
3.242
0.0011
0.0482
33TF_E2Fnone
1
0
before_TSS
15
10
3.6
2.73
4.17
0
0.0027
34TF_EGR1none
1
0
after_TSS
13
8.7
4.1
2.09
2.796
0.0051
0.0701
35TF_ELKnone
1
0
after_TSS
48
32.2
14
2.28
6.404
0
0
36TF_ELKnone
1
0
at_TSS
42
28.1
13.5
2.08
5.278
0
0
37TF_ELKnone
1
0
before_TSS
38
25.5
14.9
1.7
3.618
0.0002
0.0181
38TF_ETSnone
0
0
at_TSS
53
35.5
22.7
1.56
3.745
0.0001
0.005
39TF_ETSnone
0
0
after_TSS
53
35.5
22.8
1.55
3.722
0.0001
0.0048
40TF_ETSnone
1
0
after_TSS
13
8.7
3.2
2.68
3.785
0.0001
0.004
41TF_GABPnone
0
0
after_TSS
75
50.3
29.4
1.7
5.625
0
0
42TF_GABPnone
0
0
at_TSS
60
40.2
25.9
1.54
4
0
0.0025
43TF_GABPnone
1
0
after_TSS
29
19.4
5.8
3.34
7.151
0
0
44TF_GABPnone
1
0
before_TSS
19
12.7
6.6
1.91
2.995
0.0027
0.0772
45TF_LYFnone
0
0
before_TSS
63
42.2
28.1
1.5
3.848
0.0001
0.0087
46TF_MYBnone
0
1
after_TSS
23
15.4
6.5
2.34
4.389
0
0.0041
47TF_MYCnone
0
1
after_TSS
18
12
5.5
2.19
3.542
0.0003
0.0726
48TF_POLYAnone
1
0
before_TSS
22
14.7
7.9
1.85
3.089
0.002
0.0668
49TF_YY1none
0
0
after_TSS
41
27.5
15.8
1.73
3.91
0
0.0025
50TF_YY1none
0
0
at_TSS
37
24.8
9.8
2.51
6.17
0
0