CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0006357 regulation of transcription from RNA polymerase II promoter

Number of genes with GO:0006357 = 191
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_CTCFAnone
0
0
before_TSS
26
13.6
6
2.26
4.451
0
0.001
2ADD_CTCFBnone
0
0
before_TSS
25
13
7.3
1.77
3.06
0.0022
0.054
3ADD_FOXJ1none
0
1
at_TSS
11
5.7
1.8
3.19
4.145
0
0.0124
4ADD_GASnone
0
1
after_TSS
12
6.2
2.7
2.3
3.041
0.0023
0.0719
5ADD_MEF3none
0
1
before_TSS
17
8.9
4.1
2.13
3.293
0.0009
0.0403
6ADD_SMADnone
0
0
after_TSS
62
32.4
20.5
1.58
4.117
0
0.0046
7ADD_SMADnone
0
0
at_TSS
41
21.4
13.3
1.61
3.34
0.0008
0.0511
8ADD_SMADnone
1
0
after_TSS
35
18.3
7.2
2.52
5.952
0
0
9ADD_SMADnone
0
0
before_TSS
22
11.5
5.7
2
3.451
0.0005
0.0204
10ADD_SMADnone
1
0
at_TSS
16
8.3
3.5
2.39
3.692
0.0002
0.0203
11ADD_TBX5none
0
1
before_TSS
15
7.8
3.2
2.43
3.642
0.0002
0.033
12ADD_WHNnone
1
0
before_TSS
43
22.5
13.5
1.66
3.643
0.0002
0.0109
13ADD_ZF5none
0
0
before_TSS
82
42.9
26.1
1.63
5.306
0
0
14ADD_ZF5none
1
0
before_TSS
48
25.1
11.3
2.21
6.061
0
0
15ADD_ZF5none
1
1
after_TSS
31
16.2
9.1
1.78
3.45
0.0005
0.0293
16MIT_006SP1none
0
1
after_TSS
58
30.3
19.5
1.55
3.81
0.0001
0.0101
17MIT_006SP1none
1
0
after_TSS
42
21.9
13.4
1.63
3.507
0.0004
0.0276
18MIT_006SP1none
1
0
before_TSS
41
21.4
12.2
1.75
3.937
0
0.0043
19MIT_015AP4none
0
1
before_TSS
30
15.7
7.6
2.05
4.234
0
0.0042
20MIT_017IRFnone
0
1
after_TSS
25
13
6.1
2.13
4.04
0
0.0065
21MIT_017IRFnone
0
1
at_TSS
15
7.8
3.2
2.38
3.565
0.0003
0.0665
22MIT_024MAZnone
0
1
before_TSS
42
21.9
11.1
1.96
4.773
0
0.0006
23MIT_024MAZnone
1
0
at_TSS
31
16.2
7.8
2.05
4.309
0
0.006
24MIT_030none
0
0
before_TSS
19
9.9
5.2
1.9
2.959
0.003
0.0564
25MIT_078none
0
1
before_TSS
10
5.2
2.1
2.48
3.034
0.0024
0.0679
26MIT_081none
0
1
after_TSS
25
13
7.2
1.81
3.151
0.0016
0.0541
27MIT_157none
0
0
before_TSS
11
5.7
2.4
2.38
3.038
0.0023
0.0544
28TF_AP4none
0
1
before_TSS
20
10.4
5.4
1.92
3.078
0.002
0.0693
29TF_ARNTnone
0
1
at_TSS
40
20.9
12.9
1.61
3.317
0.0009
0.0832
30TF_ARNTnone
0
1
before_TSS
33
17.2
10.5
1.63
3.04
0.0023
0.0721
31TF_ARNTnone
1
1
after_TSS
15
7.8
2.9
2.68
4.074
0
0.0084
32TF_CEBPnone
0
1
before_TSS
19
9.9
4.8
2.05
3.321
0.0008
0.041
33TF_CHXnone
0
1
before_TSS
20
10.4
5.2
1.99
3.271
0.001
0.0392
34TF_E2Fnone
1
0
before_TSS
18
9.4
3.6
2.56
4.254
0
0.0019
35TF_FOXOnone
0
1
after_TSS
10
5.2
1.9
2.69
3.325
0.0008
0.0359
36TF_HNF3none
0
1
at_TSS
10
5.2
1.8
2.86
3.547
0.0003
0.0475
37TF_HTFnone
0
1
before_TSS
34
17.8
10.1
1.75
3.546
0.0003
0.0238
38TF_MAZRnone
0
1
after_TSS
59
30.8
17.6
1.74
4.818
0
0.0005
39TF_MAZRnone
1
0
after_TSS
49
25.6
13.9
1.84
4.716
0
0.0004
40TF_MAZRnone
1
0
before_TSS
40
20.9
13.5
1.55
3.033
0.0024
0.0521
41TF_NF1none
0
1
before_TSS
25
13
6.6
1.96
3.578
0.0003
0.0253
42TF_NFKBnone
0
1
after_TSS
27
14.1
7.9
1.78
3.192
0.0014
0.0517
43TF_NFYnone
0
1
before_TSS
27
14.1
7.4
1.9
3.582
0.0003
0.0311
44TF_PAX4none
0
1
after_TSS
26
13.6
7.2
1.87
3.402
0.0006
0.0306
45TF_POLYAnone
0
1
before_TSS
17
8.9
4.4
1.98
2.97
0.0029
0.0778
46TF_SOX9none
0
1
before_TSS
18
9.4
4.3
2.16
3.469
0.0005
0.0273
47TF_SP1none
1
0
after_TSS
68
35.6
23.3
1.52
4.018
0
0.0053
48TF_SP1none
1
0
before_TSS
51
26.7
15.6
1.7
4.225
0
0.0017