CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0006366 transcription from RNA polymerase II promoter

Number of genes with GO:0006366 = 231
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_CTCFAnone
0
0
before_TSS
29
12.5
6
2.08
4.22
0
0.0011
2ADD_CTCFBnone
0
0
before_TSS
28
12.1
7.3
1.64
2.802
0.005
0.0978
3ADD_FOXJ1none
0
1
before_TSS
22
9.5
5.2
1.8
2.92
0.0035
0.0557
4ADD_FOXJ1none
0
1
at_TSS
13
5.6
1.8
3.12
4.415
0
0.0036
5ADD_HELIOSnone
0
1
before_TSS
14
6
3
1.98
2.677
0.0074
0.0937
6ADD_KLFnone
0
1
before_TSS
31
13.4
8.5
1.57
2.677
0.0074
0.0971
7ADD_MEF3none
0
1
before_TSS
19
8.2
4.1
1.97
3.11
0.0018
0.0456
8ADD_PAX8none
0
1
before_TSS
25
10.8
6.1
1.75
2.965
0.003
0.0553
9ADD_SMADnone
0
0
after_TSS
74
32
20.5
1.56
4.373
0
0.0014
10ADD_SMADnone
0
0
at_TSS
47
20.3
13.3
1.52
3.173
0.0015
0.092
11ADD_SMADnone
1
0
after_TSS
40
17.3
7.2
2.38
5.96
0
0
12ADD_SMADnone
0
0
before_TSS
25
10.8
5.7
1.88
3.343
0.0008
0.0252
13ADD_SMADnone
1
0
at_TSS
18
7.7
3.5
2.22
3.579
0.0003
0.0315
14ADD_TBX5none
0
1
before_TSS
15
6.4
3.2
2
2.831
0.0046
0.0679
15ADD_WHNnone
1
0
before_TSS
54
23.3
13.5
1.72
4.4
0
0.0006
16ADD_ZF5none
0
0
before_TSS
96
41.5
26.1
1.58
5.366
0
0
17ADD_ZF5none
1
0
before_TSS
54
23.3
11.3
2.06
5.827
0
0
18ADD_ZF5none
1
1
after_TSS
36
15.5
9.1
1.71
3.456
0.0005
0.0334
19MIT_001NRF1none
0
1
before_TSS
12
5.1
2.3
2.25
2.954
0.0031
0.0521
20MIT_006SP1none
1
0
after_TSS
51
22
13.4
1.64
3.903
0
0.0057
21MIT_006SP1none
1
0
before_TSS
51
22
12.2
1.8
4.623
0
0.0002
22MIT_015AP4none
0
1
before_TSS
31
13.4
7.6
1.75
3.343
0.0008
0.0337
23MIT_017IRFnone
0
1
before_TSS
31
13.4
7.8
1.69
3.141
0.0016
0.044
24MIT_017IRFnone
0
1
after_TSS
27
11.6
6.1
1.9
3.555
0.0003
0.0276
25MIT_022none
0
1
before_TSS
13
5.6
2.3
2.4
3.34
0.0008
0.0306
26MIT_024MAZnone
0
1
before_TSS
52
22.5
11.1
2.01
5.512
0
0
27MIT_024MAZnone
1
0
at_TSS
37
16
7.8
2.02
4.625
0
0.0013
28MIT_024MAZnone
1
1
after_TSS
15
6.4
2.9
2.18
3.19
0.0014
0.0743
29MIT_051TATAnone
0
1
before_TSS
21
9
4.8
1.88
3.062
0.0021
0.0502
30MIT_056PAX4none
0
1
at_TSS
32
13.8
8.3
1.66
3.079
0.002
0.0844
31MIT_056PAX4none
0
1
before_TSS
28
12.1
7.5
1.6
2.653
0.0079
0.0912
32MIT_081none
0
0
at_TSS
45
19.4
11.8
1.63
3.598
0.0003
0.0391
33MIT_091none
0
1
at_TSS
13
5.6
1.9
2.94
4.17
0
0.0055
34MIT_157none
0
0
before_TSS
13
5.6
2.4
2.33
3.215
0.0013
0.0367
35TF_AHRnone
0
1
before_TSS
47
20.3
11.9
1.69
3.948
0
0.0096
36TF_ARNTnone
0
1
before_TSS
42
18.1
10.5
1.72
3.8
0.0001
0.0105
37TF_ARNTnone
1
1
after_TSS
17
7.3
2.9
2.51
4.038
0
0.0065
38TF_ATF1none
0
1
before_TSS
39
16.8
10.2
1.65
3.375
0.0007
0.0385
39TF_ATF6none
0
1
before_TSS
37
16
10
1.58
3.026
0.0024
0.0533
40TF_CEBPnone
0
1
before_TSS
22
9.5
4.8
1.97
3.355
0.0007
0.0363
41TF_CHXnone
0
1
before_TSS
23
9.9
5.2
1.9
3.249
0.0011
0.0353
42TF_CP2none
0
1
before_TSS
29
12.5
7.5
1.65
2.88
0.0039
0.0606
43TF_CREBnone
0
1
before_TSS
36
15.5
9.8
1.58
2.964
0.003
0.0529
44TF_E2Fnone
1
0
before_TSS
19
8.2
3.6
2.23
3.708
0.0002
0.0084
45TF_E2Fnone
1
0
after_TSS
18
7.7
3.6
2.1
3.335
0.0008
0.039
46TF_ELKnone
0
1
before_TSS
40
17.3
11.1
1.55
3.008
0.0026
0.0534
47TF_EVInone
0
1
before_TSS
15
6.4
3.3
1.93
2.664
0.0077
0.0942
48TF_HEN1none
0
1
before_TSS
23
9.9
5.8
1.71
2.721
0.0065
0.0882
49TF_HMXnone
0
1
at_TSS
16
6.9
3
2.3
3.52
0.0004
0.0225
50TF_HNF3none
0
1
at_TSS
12
5.1
1.8
2.84
3.861
0.0001
0.0103
51TF_HTFnone
0
1
before_TSS
42
18.1
10.1
1.79
4.1
0
0.0075
52TF_MAZRnone
0
1
after_TSS
68
29.4
17.6
1.66
4.724
0
0.0008
53TF_MAZRnone
1
0
after_TSS
56
24.2
13.9
1.74
4.569
0
0.0008
54TF_MAZRnone
1
0
before_TSS
49
21.2
13.5
1.57
3.462
0.0005
0.0178
55TF_NF1none
0
1
before_TSS
30
12.9
6.6
1.94
3.879
0.0001
0.0095
56TF_NFYnone
0
1
before_TSS
32
13.8
7.4
1.87
3.78
0.0001
0.0095
57TF_PAX4none
0
1
after_TSS
29
12.5
7.2
1.72
3.122
0.0017
0.073
58TF_S8none
0
1
before_TSS
21
9
5.2
1.73
2.661
0.0077
0.0919
59TF_SOX9none
0
1
before_TSS
20
8.6
4.3
1.99
3.245
0.0011
0.033
60TF_SP1none
1
0
before_TSS
63
27.2
15.6
1.74
4.895
0
0.0001