CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0006396 RNA processing

Number of genes with GO:0006396 = 273
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_HOGNESSnone
0
0
before_TSS
53
19.4
8.3
2.32
6.688
0
0
2ADD_MTF1Anone
0
0
at_TSS
25
9.1
5.5
1.65
2.638
0.0083
0.0726
3ADD_WHNnone
1
0
at_TSS
46
16.8
10.8
1.54
3.208
0.0013
0.0152
4MIT_001NRF1none
0
0
at_TSS
61
22.3
9.9
2.25
6.95
0
0
5MIT_001NRF1none
0
0
after_TSS
26
9.5
3.8
2.49
4.977
0
0
6MIT_002MYCnone
0
0
after_TSS
43
15.7
7.8
2.01
4.939
0
0
7MIT_003ELKnone
0
0
at_TSS
78
28.5
13.4
2.12
7.411
0
0
8MIT_003ELKnone
0
0
after_TSS
58
21.2
9
2.33
7.067
0
0
9MIT_004none
0
0
at_TSS
19
6.9
3.3
2.07
3.346
0.0008
0.0096
10MIT_010YY1none
0
0
after_TSS
28
10.2
4.1
2.47
5.119
0
0
11MIT_010YY1none
0
0
at_TSS
27
9.8
3.8
2.57
5.258
0
0
12MIT_011GABPnone
0
0
at_TSS
46
16.8
8.1
2.06
5.301
0
0
13MIT_011GABPnone
0
0
after_TSS
34
12.4
5.6
2.22
4.979
0
0
14MIT_019none
0
0
at_TSS
70
25.6
15.4
1.65
4.692
0
0
15MIT_020E4F1none
0
0
at_TSS
42
15.3
9.2
1.66
3.56
0.0003
0.0048
16MIT_021none
0
0
at_TSS
38
13.9
6.6
2.08
4.857
0
0
17MIT_021none
0
0
after_TSS
38
13.9
6.6
2.08
4.857
0
0
18MIT_022none
0
0
at_TSS
55
20.1
9.3
2.14
6.166
0
0
19MIT_022none
0
0
after_TSS
32
11.7
6.8
1.71
3.223
0.0012
0.0221
20MIT_022none
1
0
at_TSS
15
5.4
1.2
4.4
6.393
0
0
21MIT_030none
0
0
at_TSS
40
14.6
8.2
1.77
3.871
0.0001
0.0014
22MIT_039none
0
0
at_TSS
19
6.9
2.7
2.57
4.388
0
0.0001
23MIT_048NFKBnone
0
0
at_TSS
16
5.8
2.2
2.65
4.158
0
0.0004
24MIT_069E2Fnone
0
0
before_TSS
17
6.2
2.4
2.56
4.122
0
0.0045
25MIT_096none
0
0
at_TSS
18
6.5
1.7
3.69
6.069
0
0
26MIT_106none
0
0
at_TSS
17
6.2
1.8
3.29
5.317
0
0
27MIT_108FAC1none
0
0
at_TSS
15
5.4
1.8
2.94
4.477
0
0.0001
28MIT_157none
0
0
after_TSS
19
6.9
1.9
3.5
5.965
0
0
29MIT_157none
0
0
at_TSS
16
5.8
1.7
3.42
5.349
0
0
30NCBI_003none
0
0
before_TSS
37
13.5
6.4
2.1
4.854
0
0.0002
31TF_ARNTnone
1
0
at_TSS
25
9.1
5.4
1.67
2.71
0.0067
0.0631
32TF_ATF1none
1
0
at_TSS
44
16.1
8.8
1.82
4.31
0
0.0002
33TF_ATF6none
0
0
at_TSS
106
38.8
25.3
1.52
5.155
0
0
34TF_CDPnone
0
1
after_TSS
18
6.5
2.9
2.21
3.56
0.0003
0.0678
35TF_CLOXnone
0
1
after_TSS
17
6.2
2.8
2.17
3.364
0.0007
0.0937
36TF_E2Fnone
1
0
before_TSS
21
7.6
3.6
2.09
3.565
0.0003
0.0166
37TF_E2Fnone
1
0
after_TSS
19
6.9
3.6
1.88
2.894
0.0038
0.0556
38TF_ELKnone
0
0
at_TSS
156
57.1
36
1.58
7.354
0
0
39TF_ELKnone
1
0
at_TSS
84
30.7
13.5
2.27
8.444
0
0
40TF_ELKnone
1
0
after_TSS
77
28.2
14
2
6.787
0
0
41TF_ELKnone
1
0
before_TSS
62
22.7
14.9
1.51
3.615
0.0003
0.0183
42TF_ETSnone
0
0
at_TSS
109
39.9
22.7
1.75
6.832
0
0
43TF_GABPnone
0
0
after_TSS
126
46.1
29.4
1.56
6.121
0
0
44TF_GABPnone
0
0
at_TSS
122
44.6
25.9
1.71
7.127
0
0
45TF_GABPnone
1
1
at_TSS
20
7.3
2.9
2.5
4.364
0
0.0046
46TF_HLFnone
0
0
at_TSS
29
10.6
5.2
2.04
4.075
0
0.0006
47TF_MYCnone
0
0
after_TSS
59
21.6
13.6
1.57
3.85
0.0001
0.0025
48TF_YY1none
0
0
after_TSS
72
26.3
15.8
1.66
4.797
0
0
49TF_YY1none
0
0
at_TSS
61
22.3
9.8
2.26
7
0
0