CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0006397 mRNA processing

Number of genes with GO:0006397 = 189
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_HOGNESSnone
0
0
before_TSS
37
19.5
8.3
2.34
5.627
0
0
2ADD_SMADnone
1
0
after_TSS
25
13.2
7.2
1.82
3.196
0.0013
0.0255
3ADD_TANTIGENnone
0
0
before_TSS
35
18.5
11.1
1.65
3.236
0.0012
0.0633
4MIT_001NRF1none
0
0
at_TSS
39
20.6
9.9
2.08
4.969
0
0
5MIT_001NRF1none
0
0
after_TSS
18
9.5
3.8
2.49
4.126
0
0.001
6MIT_003ELKnone
0
0
at_TSS
47
24.8
13.4
1.84
4.64
0
0.0001
7MIT_003ELKnone
0
0
after_TSS
40
21.1
9
2.32
5.82
0
0
8MIT_004none
0
0
before_TSS
11
5.8
2.4
2.34
2.977
0.0029
0.0887
9MIT_010YY1none
0
0
after_TSS
21
11.1
4.1
2.67
4.838
0
0
10MIT_010YY1none
0
0
at_TSS
20
10.5
3.8
2.75
4.858
0
0
11MIT_011GABPnone
0
0
at_TSS
28
14.8
8.1
1.81
3.365
0.0007
0.0175
12MIT_011GABPnone
0
0
after_TSS
26
13.7
5.6
2.45
4.913
0
0
13MIT_019none
0
0
at_TSS
44
23.2
15.4
1.5
2.986
0.0028
0.0431
14MIT_021none
0
0
after_TSS
32
16.9
6.6
2.53
5.7
0
0
15MIT_021none
0
0
at_TSS
24
12.6
6.6
1.9
3.349
0.0008
0.0174
16MIT_022none
0
0
at_TSS
34
17.9
9.3
1.91
4.087
0
0.0013
17MIT_030none
0
0
at_TSS
28
14.8
8.2
1.79
3.291
0.0009
0.0182
18MIT_039none
0
0
at_TSS
14
7.4
2.7
2.74
4.021
0
0.0016
19MIT_048NFKBnone
0
0
at_TSS
10
5.2
2.2
2.39
2.91
0.0036
0.0529
20MIT_062none
0
0
at_TSS
12
6.3
2.8
2.21
2.891
0.0038
0.054
21MIT_062none
0
1
after_TSS
11
5.8
1.8
3.23
4.187
0
0.0051
22MIT_069E2Fnone
0
0
before_TSS
15
7.9
2.4
3.26
4.956
0
0.0001
23MIT_081none
0
0
after_TSS
46
24.3
15.2
1.59
3.481
0.0004
0.0101
24MIT_096none
0
0
at_TSS
11
5.8
1.7
3.26
4.223
0
0.0008
25MIT_102none
0
0
at_TSS
10
5.2
2
2.52
3.085
0.002
0.0323
26MIT_106none
0
0
at_TSS
13
6.8
1.8
3.63
5.07
0
0
27MIT_108FAC1none
0
0
at_TSS
10
5.2
1.8
2.83
3.504
0.0004
0.0119
28MIT_157none
0
0
after_TSS
15
7.9
1.9
4
5.916
0
0
29MIT_157none
0
0
at_TSS
12
6.3
1.7
3.71
4.957
0
0
30NCBI_003none
0
0
before_TSS
28
14.8
6.4
2.3
4.738
0
0.0002
31TF_ATF1none
1
0
at_TSS
30
15.8
8.8
1.8
3.454
0.0005
0.0134
32TF_CREBnone
1
0
before_TSS
46
24.3
14.7
1.64
3.726
0.0001
0.0142
33TF_E2Fnone
1
0
before_TSS
17
8.9
3.6
2.44
3.915
0
0.0082
34TF_ELKnone
1
0
after_TSS
57
30.1
14
2.14
6.405
0
0
35TF_ELKnone
1
0
at_TSS
53
28
13.5
2.07
5.895
0
0
36TF_ELKnone
1
0
before_TSS
44
23.2
14.9
1.55
3.218
0.0012
0.059
37TF_ETSnone
0
0
at_TSS
71
37.5
22.7
1.64
4.884
0
0
38TF_ETSnone
0
0
after_TSS
66
34.9
22.8
1.52
3.985
0
0.0016
39TF_GABPnone
0
0
after_TSS
88
46.5
29.4
1.58
5.199
0
0
40TF_GABPnone
0
0
at_TSS
77
40.7
25.9
1.56
4.661
0
0.0001
41TF_GABPnone
1
0
after_TSS
30
15.8
5.8
2.72
5.944
0
0
42TF_GABPnone
1
0
before_TSS
23
12.1
6.6
1.82
3.055
0.0022
0.0823
43TF_MYBnone
0
1
after_TSS
28
14.8
6.5
2.25
4.604
0
0.0015
44TF_PAX4none
1
0
after_TSS
11
5.8
2.4
2.33
2.953
0.0031
0.05
45TF_POLYAnone
1
0
before_TSS
27
14.2
7.9
1.79
3.24
0.0011
0.0729
46TF_SP1none
0
1
before_TSS
47
24.8
15.3
1.61
3.653
0.0002
0.0948
47TF_YY1none
0
0
after_TSS
50
26.4
15.8
1.66
4.008
0
0.0016
48TF_YY1none
0
0
at_TSS
45
23.8
9.8
2.41
6.485
0
0