CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0007001 chromosome organization and biogenesis (sensu Eukaryota)

Number of genes with GO:0007001 = 208
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_FOXP1none
0
0
at_TSS
17
8.1
4.3
1.87
2.722
0.0064
0.0949
2ADD_GCNFnone
0
1
before_TSS
31
14.9
7.1
2.08
4.373
0
0.0005
3ADD_LRHnone
0
0
after_TSS
80
38.4
25.6
1.5
4.272
0
0.0006
4ADD_LRHnone
0
1
before_TSS
37
17.7
8.2
2.16
5.066
0
0
5ADD_LRHnone
1
0
after_TSS
32
15.3
4.2
3.59
7.981
0
0
6ADD_LRHnone
1
1
before_TSS
13
6.2
0.8
7.2
8.443
0
0
7ADD_MAFnone
0
0
after_TSS
22
10.5
5.9
1.77
2.839
0.0045
0.0662
8ADD_NCXnone
0
1
before_TSS
18
8.6
4.6
1.86
2.78
0.0054
0.0765
9ADD_PAX8none
0
1
after_TSS
42
20.1
9.8
2.04
5.043
0
0
10ADD_SF1Anone
0
0
after_TSS
41
19.7
5.9
3.29
8.421
0
0
11ADD_SF1Anone
0
1
before_TSS
20
9.6
2.3
4.01
6.867
0
0
12ADD_TBX5none
0
0
after_TSS
34
16.3
10.6
1.52
2.657
0.0078
0.0961
13ADD_WHNnone
1
0
before_TSS
57
27.4
13.5
2.02
5.883
0
0
14ADD_ZF5none
0
1
before_TSS
37
17.7
10.3
1.71
3.55
0.0003
0.01
15MIT_001NRF1none
0
0
after_TSS
18
8.6
3.8
2.26
3.671
0.0002
0.0055
16MIT_005NFYnone
0
0
at_TSS
57
27.4
12.3
2.22
6.682
0
0
17MIT_006SP1none
0
1
before_TSS
43
20.6
13.2
1.56
3.205
0.0013
0.0274
18MIT_013LEFnone
1
0
after_TSS
17
8.1
3.9
2.07
3.173
0.0015
0.0324
19MIT_024MAZnone
0
1
before_TSS
36
17.3
11.1
1.54
2.824
0.0047
0.0754
20MIT_035MYODnone
0
1
before_TSS
25
12
5.3
2.24
4.298
0
0.0006
21MIT_041MEISnone
0
1
after_TSS
24
11.5
4.5
2.53
4.875
0
0
22MIT_044OCTnone
0
0
at_TSS
17
8.1
2.1
3.76
5.986
0
0
23MIT_045none
0
1
after_TSS
37
17.7
11.4
1.55
2.885
0.0039
0.0795
24MIT_045none
0
1
before_TSS
26
12.5
7.4
1.67
2.783
0.0053
0.0788
25MIT_046none
0
0
at_TSS
28
13.4
7.3
1.83
3.423
0.0006
0.0125
26MIT_051TATAnone
0
0
at_TSS
31
14.9
7.8
1.9
3.828
0.0001
0.0031
27MIT_063none
0
0
after_TSS
14
6.7
3.1
2.11
2.942
0.0032
0.0518
28MIT_069E2Fnone
0
0
before_TSS
16
7.6
2.4
3.16
4.973
0
0
29MIT_081none
0
1
after_TSS
26
12.5
7.2
1.72
2.96
0.003
0.0662
30MIT_095none
0
0
at_TSS
11
5.2
2.2
2.37
3.025
0.0024
0.0413
31MIT_101none
0
1
before_TSS
26
12.5
5.4
2.28
4.497
0
0.0003
32MIT_109none
0
0
after_TSS
12
5.7
1.9
3.03
4.122
0
0.0011
33MIT_110none
0
0
at_TSS
12
5.7
2.1
2.67
3.618
0.0002
0.0067
34MIT_120none
0
0
after_TSS
33
15.8
1.8
8.61
15.168
0
0
35MIT_120none
0
0
before_TSS
26
12.5
1.6
7.41
12.22
0
0
36MIT_124none
0
0
at_TSS
14
6.7
2.8
2.36
3.403
0.0006
0.0121
37MIT_140none
0
1
before_TSS
20
9.6
5.3
1.81
2.798
0.0051
0.0784
38MIT_146none
0
0
before_TSS
11
5.2
1.9
2.74
3.56
0.0003
0.0113
39MIT_152none
0
0
after_TSS
27
12.9
7.3
1.75
3.111
0.0018
0.0341
40MIT_156none
0
0
after_TSS
14
6.7
1.4
4.6
6.384
0
0
41MIT_165none
0
0
before_TSS
23
11
4.1
2.63
4.976
0
0
42MIT_165none
0
0
after_TSS
21
10
3.4
2.9
5.266
0
0
43MIT_169none
0
0
before_TSS
32
15.3
4.8
3.15
7.099
0
0
44MIT_169none
0
0
after_TSS
30
14.4
1.9
7.27
12.98
0
0
45TF_AHRnone
1
0
before_TSS
66
31.7
19.1
1.65
4.634
0
0.0001
46TF_AHRnone
1
1
after_TSS
32
15.3
5.5
2.78
6.274
0
0
47TF_AP2none
0
1
before_TSS
36
17.3
10.6
1.62
3.139
0.0016
0.031
48TF_AP2none
1
1
after_TSS
30
14.4
8.1
1.77
3.343
0.0008
0.0252
49TF_AP2Anone
1
1
after_TSS
32
15.3
8.7
1.75
3.421
0.0006
0.0207
50TF_AP4none
0
1
before_TSS
22
10.5
5.4
1.93
3.282
0.001
0.0221
51TF_ARNTnone
0
1
after_TSS
57
27.4
17.3
1.57
3.842
0.0001
0.0049
52TF_ARNTnone
1
0
after_TSS
35
16.8
10.6
1.57
2.912
0.0035
0.0547
53TF_ATF1none
1
0
after_TSS
47
22.5
11.8
1.9
4.837
0
0
54TF_ATF1none
1
1
before_TSS
11
5.2
1.9
2.74
3.56
0.0003
0.0104
55TF_ATF6none
0
1
after_TSS
52
25
15
1.65
4.041
0
0.0024
56TF_ATF6none
1
0
after_TSS
32
15.3
7.9
1.93
4.011
0
0.0017
57TF_CEBPnone
0
0
at_TSS
35
16.8
9.6
1.74
3.54
0.0004
0.0086
58TF_COMPnone
0
0
at_TSS
51
24.5
12.8
1.91
5.083
0
0
59TF_COMPnone
0
1
before_TSS
21
10
5
1.98
3.305
0.0009
0.0217
60TF_CREBnone
1
0
after_TSS
41
19.7
8.4
2.32
5.881
0
0
61TF_E2Fnone
0
0
after_TSS
74
35.5
21.9
1.61
4.773
0
0
62TF_E2Fnone
0
0
before_TSS
64
30.7
19.4
1.57
4.141
0
0.0014
63TF_E2Fnone
0
0
at_TSS
47
22.5
15
1.5
3.088
0.002
0.0351
64TF_E2Fnone
1
0
before_TSS
23
11
3.6
3
5.705
0
0
65TF_E2Fnone
1
0
after_TSS
21
10
3.6
2.73
4.938
0
0
66TF_E47none
0
1
before_TSS
24
11.5
6.6
1.72
2.827
0.0046
0.0781
67TF_EGR1none
0
1
before_TSS
19
9.1
4.7
1.92
3.005
0.0026
0.0462
68TF_HTFnone
1
0
after_TSS
33
15.8
8.6
1.83
3.733
0.0001
0.0046
69TF_MAZRnone
0
1
before_TSS
36
17.3
10.3
1.67
3.331
0.0008
0.0211
70TF_MAZRnone
1
1
before_TSS
17
8.1
2.9
2.79
4.53
0
0.0003
71TF_MEISnone
0
1
after_TSS
30
14.4
8.2
1.74
3.261
0.0011
0.0312
72TF_MYBnone
0
1
after_TSS
31
14.9
6.5
2.26
4.886
0
0.0001
73TF_NF1none
0
1
before_TSS
32
15.3
6.6
2.3
5.075
0
0
74TF_NF1none
0
1
after_TSS
28
13.4
7.2
1.85
3.487
0.0004
0.0178
75TF_NFYnone
0
0
at_TSS
84
40.3
22.4
1.79
6.256
0
0
76TF_NFYnone
1
0
at_TSS
45
21.6
6.1
3.49
9.314
0
0
77TF_OCTnone
0
0
at_TSS
24
11.5
4.9
2.33
4.437
0
0.0003
78TF_OLF1none
0
1
after_TSS
48
23
12.7
1.8
4.499
0
0.0004
79TF_PAX4none
0
1
after_TSS
27
12.9
7.2
1.78
3.198
0.0013
0.0361
80TF_PAX4none
0
1
before_TSS
24
11.5
5
2.3
4.356
0
0.0005
81TF_PBXnone
0
0
at_TSS
39
18.7
8.6
2.15
5.2
0
0
82TF_POLYAnone
0
0
at_TSS
17
8.1
3.2
2.54
4.102
0
0.0011
83TF_POU3Fnone
0
0
at_TSS
25
12
4.7
2.53
4.98
0
0
84TF_RFXnone
0
1
before_TSS
26
12.5
6.9
1.79
3.15
0.0016
0.0314
85TF_RFX1none
0
1
before_TSS
30
14.4
7.4
1.94
3.893
0
0.0032
86TF_SP1none
1
1
before_TSS
26
12.5
6.3
1.96
3.672
0.0002
0.0073
87TF_STAFnone
0
1
before_TSS
24
11.5
4.6
2.46
4.727
0
0.0001
88TF_STAFnone
0
1
after_TSS
24
11.5
5.2
2.18
4.071
0
0.0024
89TF_TATAnone
0
0
at_TSS
20
9.6
3.7
2.53
4.434
0
0.0003
90TF_TSTnone
0
0
at_TSS
18
8.6
4.6
1.84
2.724
0.0064
0.0983
91TF_XVENTnone
0
0
at_TSS
16
7.6
3.8
2
2.914
0.0035
0.0567
92TF_YY1none
0
0
at_TSS
38
18.2
9.8
1.85
4.105
0
0.0012