CisView Mouse (mm6, March 2005)

TFBS for Gene Ontology term GO:0007389 pattern specification

Number of genes with GO:0007389 = 128
Total number of genes = 12103
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_CTCFAnone
0
1
after_TSS
17
13.2
6.1
2.16
3.39
0.0006
0.0088
2ADD_FOXJ1none
0
1
before_TSS
18
14
5.2
2.66
4.474
0
0.0001
3ADD_HELIOSnone
0
1
after_TSS
12
9.3
2.6
3.48
4.693
0
0.0001
4ADD_HMGnone
0
1
before_TSS
30
23.4
11.4
2.05
4.298
0
0.0002
5ADD_HMGnone
0
1
after_TSS
24
18.7
7.9
2.35
4.541
0
0.0001
6ADD_HMGnone
0
1
at_TSS
16
12.5
4.6
2.7
4.27
0
0.0007
7ADD_KLFnone
0
1
after_TSS
26
20.3
11.1
1.81
3.3
0.0009
0.011
8ADD_KLFnone
0
1
before_TSS
25
19.5
8.5
2.28
4.47
0
0.0001
9ADD_LRHnone
0
1
at_TSS
11
8.5
3.6
2.36
3.012
0.0025
0.0558
10ADD_LXR2none
0
1
before_TSS
10
7.8
2.4
3.24
4.015
0
0.0007
11ADD_MEF3none
0
1
before_TSS
11
8.5
4.1
2.05
2.514
0.0119
0.0642
12ADD_MEF3none
0
1
at_TSS
10
7.8
2.9
2.64
3.258
0.0011
0.0256
13ADD_MTF1Bnone
0
1
after_TSS
15
11.7
5
2.31
3.458
0.0005
0.0076
14ADD_NANOGnone
0
1
before_TSS
13
10.1
3.4
2.91
4.144
0
0.0004
15ADD_PAX8none
0
1
before_TSS
17
13.2
6.1
2.15
3.359
0.0007
0.0071
16ADD_PITnone
0
1
before_TSS
42
32.8
15.5
2.11
5.421
0
0
17ADD_PITnone
0
1
after_TSS
23
17.9
7.3
2.44
4.625
0
0.0001
18ADD_PITnone
0
1
at_TSS
20
15.6
5.3
2.89
5.149
0
0
19ADD_PU1none
0
1
after_TSS
37
28.9
14.5
1.99
4.653
0
0.0001
20ADD_PU1none
0
1
before_TSS
34
26.5
11.7
2.25
5.214
0
0
21ADD_SF1Bnone
0
1
before_TSS
20
15.6
6.2
2.48
4.374
0
0.0001
22ADD_SMADnone
0
0
after_TSS
45
35.1
20.5
1.71
4.12
0
0.0069
23ADD_SMADnone
0
0
before_TSS
17
13.2
5.7
2.3
3.678
0.0002
0.0071
24ADD_TBX5none
0
1
before_TSS
11
8.5
3.2
2.66
3.449
0.0005
0.0054
25ADD_WHNnone
0
1
after_TSS
48
37.5
24.8
1.5
3.33
0.0008
0.0102
26ADD_ZF5none
0
0
before_TSS
57
44.5
26.1
1.7
4.746
0
0.0002
27ADD_ZF5none
0
1
after_TSS
50
39
24.7
1.57
3.773
0.0001
0.0025
28ADD_ZF5none
1
1
before_TSS
12
9.3
3.8
2.45
3.298
0.0009
0.0082
29MIT_002MYCnone
0
1
at_TSS
15
11.7
4.6
2.52
3.831
0.0001
0.0035
30MIT_002MYCnone
0
1
after_TSS
10
7.8
3.6
2.11
2.484
0.0129
0.097
31MIT_005NFYnone
0
1
before_TSS
10
7.8
3.4
2.27
2.731
0.0063
0.0361
32MIT_006SP1none
0
0
before_TSS
61
47.6
29.6
1.6
4.485
0
0.0003
33MIT_006SP1none
1
1
before_TSS
19
14.8
4.4
3.35
5.767
0
0
34MIT_012MYODnone
0
1
before_TSS
24
18.7
11.8
1.57
2.407
0.016
0.0829
35MIT_013LEFnone
0
1
after_TSS
21
16.4
8
2.04
3.515
0.0004
0.0064
36MIT_013LEFnone
0
1
before_TSS
20
15.6
9.1
1.7
2.547
0.0108
0.0593
37MIT_013LEFnone
0
1
at_TSS
16
12.5
4.1
2.98
4.727
0
0.0002
38MIT_016ETSnone
0
1
before_TSS
12
9.3
4.3
2.16
2.819
0.0048
0.0293
39MIT_017IRFnone
0
1
before_TSS
21
16.4
7.8
2.07
3.587
0.0003
0.0034
40MIT_017IRFnone
0
1
after_TSS
20
15.6
6.1
2.54
4.501
0
0.0001
41MIT_017IRFnone
0
1
at_TSS
10
7.8
3.2
2.37
2.885
0.0039
0.0716
42MIT_019none
0
1
before_TSS
16
12.5
4.2
2.96
4.681
0
0
43MIT_024MAZnone
0
0
before_TSS
81
63.2
40.3
1.56
5.317
0
0
44MIT_024MAZnone
0
1
at_TSS
37
28.9
16.6
1.73
3.726
0.0001
0.005
45MIT_024MAZnone
0
1
after_TSS
33
25.7
14.6
1.76
3.591
0.0003
0.005
46MIT_024MAZnone
1
0
at_TSS
22
17.1
7.8
2.17
3.922
0
0.0107
47MIT_024MAZnone
1
1
before_TSS
15
11.7
2.8
4.06
6.004
0
0
48MIT_025SF1none
0
1
before_TSS
19
14.8
5.5
2.65
4.578
0
0.0001
49MIT_029none
0
1
before_TSS
16
12.5
5
2.47
3.871
0.0001
0.0012
50MIT_030none
0
0
before_TSS
16
12.5
5.2
2.39
3.72
0.0001
0.0066
51MIT_036FOXOnone
0
1
before_TSS
11
8.5
3.6
2.32
2.955
0.0031
0.022
52MIT_050PU1none
0
1
before_TSS
12
9.3
2.8
3.3
4.483
0
0.0001
53MIT_050PU1none
0
1
after_TSS
10
7.8
3
2.54
3.122
0.0017
0.0182
54MIT_051TATAnone
0
1
before_TSS
15
11.7
4.8
2.43
3.665
0.0002
0.0026
55MIT_051TATAnone
0
1
at_TSS
13
10.1
3.4
2.95
4.194
0
0.0009
56MIT_055NFATnone
0
1
at_TSS
13
10.1
4.6
2.19
2.993
0.0027
0.0532
57MIT_056PAX4none
0
1
before_TSS
19
14.8
7.5
1.96
3.138
0.0017
0.0138
58MIT_060FOXOnone
0
1
before_TSS
29
22.6
10
2.24
4.755
0
0
59MIT_060FOXOnone
0
1
after_TSS
18
14
5.4
2.56
4.29
0
0.0003
60MIT_060FOXOnone
0
1
at_TSS
11
8.5
3.6
2.36
3.012
0.0025
0.0527
61MIT_060FOXOnone
1
1
before_TSS
10
7.8
1.5
4.95
5.689
0
0
62MIT_073LEFnone
0
1
before_TSS
20
15.6
7.7
2
3.318
0.0009
0.008
63MIT_076AREB6none
0
1
after_TSS
27
21
13.5
1.55
2.51
0.012
0.096
64MIT_081none
0
0
before_TSS
31
24.2
11.3
2.13
4.603
0
0.0003
65MIT_082none
0
1
after_TSS
10
7.8
2
3.81
4.626
0
0.0001
66MIT_094GFInone
0
0
after_TSS
11
8.5
3
2.82
3.678
0.0002
0.0286
67MIT_094GFInone
0
1
before_TSS
10
7.8
1.4
5.56
6.193
0
0
68MIT_101none
0
1
after_TSS
25
19.5
12.3
1.57
2.47
0.0135
0.0989
69MIT_101none
0
1
before_TSS
13
10.1
5.4
1.85
2.344
0.019
0.0956
70MIT_139FOXJ1none
0
1
before_TSS
13
10.1
2
4.99
6.547
0
0
71MIT_140none
0
1
after_TSS
22
17.1
9
1.9
3.236
0.0012
0.013
72MIT_140none
0
1
before_TSS
14
10.9
5.3
2.06
2.858
0.0042
0.0278
73MIT_155none
0
1
after_TSS
10
7.8
2.2
3.46
4.256
0
0.0004
74TF_AHRnone
0
1
before_TSS
31
24.2
11.9
2.02
4.282
0
0.0002
75TF_AP2none
0
0
before_TSS
69
53.9
34.3
1.56
4.68
0
0.0002
76TF_AP2none
0
1
after_TSS
51
39.8
25.2
1.58
3.833
0.0001
0.0021
77TF_AP2none
0
1
at_TSS
38
29.6
15.7
1.88
4.348
0
0.0007
78TF_AP2none
1
0
at_TSS
25
19.5
9.1
2.12
4.077
0
0.0083
79TF_AP2none
1
1
after_TSS
25
19.5
8.1
2.39
4.739
0
0.0001
80TF_AP2Anone
0
0
before_TSS
66
51.5
32.8
1.57
4.54
0
0.0003
81TF_AP2Anone
0
1
after_TSS
55
42.9
25.8
1.66
4.44
0
0.0002
82TF_AP2Anone
0
1
at_TSS
37
28.9
16.2
1.78
3.907
0
0.0028
83TF_AP2Anone
1
1
after_TSS
28
21.8
8.7
2.5
5.288
0
0
84TF_AP2Anone
1
0
at_TSS
25
19.5
9.8
1.99
3.718
0.0002
0.0183
85TF_AP4none
0
1
after_TSS
18
14
8
1.73
2.491
0.0127
0.0971
86TF_ARNTnone
0
1
after_TSS
37
28.9
17.3
1.66
3.454
0.0005
0.0074
87TF_ARNTnone
0
1
at_TSS
27
21
12.9
1.62
2.759
0.0057
0.0964
88TF_ARP1none
0
1
after_TSS
15
11.7
3.9
2.99
4.574
0
0.0001
89TF_ATF1none
0
1
before_TSS
29
22.6
10.2
2.21
4.669
0
0
90TF_ATF6none
0
1
after_TSS
31
24.2
15
1.6
2.911
0.0036
0.0329
91TF_BARBIEnone
0
1
before_TSS
15
11.7
4.5
2.55
3.87
0.0001
0.0012
92TF_BARBIEnone
0
1
after_TSS
14
10.9
3.8
2.8
4.134
0
0.0006
93TF_BRNnone
0
0
at_TSS
13
10.1
3.2
3.09
4.39
0
0.0041
94TF_CDC5none
0
1
before_TSS
11
8.5
2.8
2.97
3.869
0.0001
0.0012
95TF_CDPnone
0
1
after_TSS
10
7.8
2.9
2.62
3.239
0.0011
0.0133
96TF_CDXnone
0
1
before_TSS
10
7.8
2.2
3.5
4.298
0
0.0002
97TF_CEBPnone
0
1
before_TSS
13
10.1
4.8
2.1
2.822
0.0047
0.0296
98TF_CHXnone
0
1
before_TSS
14
10.9
5.2
2.08
2.909
0.0036
0.0241
99TF_CLOXnone
0
1
after_TSS
13
10.1
2.8
3.54
4.967
0
0
100TF_CLOXnone
0
1
before_TSS
12
9.3
4.3
2.16
2.826
0.0047
0.0297
101TF_COMPnone
0
1
before_TSS
14
10.9
5
2.14
3.019
0.0025
0.0189
102TF_COUPnone
0
1
before_TSS
13
10.1
4.8
2.11
2.849
0.0043
0.0281
103TF_COUPnone
0
1
after_TSS
13
10.1
4.7
2.13
2.876
0.004
0.035
104TF_CP2none
0
1
before_TSS
24
18.7
7.5
2.47
4.796
0
0
105TF_CREBnone
0
1
before_TSS
22
17.1
9.8
1.74
2.809
0.0049
0.0298
106TF_E2Fnone
0
1
after_TSS
25
19.5
9.3
2.08
3.975
0
0.0012
107TF_E2Fnone
0
1
before_TSS
17
13.2
4.9
2.7
4.408
0
0.0001
108TF_E4BP4none
0
1
before_TSS
12
9.3
3.7
2.51
3.383
0.0007
0.0067
109TF_EGR1none
0
1
after_TSS
20
15.6
9.2
1.68
2.492
0.0127
0.0989
110TF_EGR1none
0
1
before_TSS
12
9.3
4.7
1.97
2.478
0.0132
0.07
111TF_ELKnone
0
1
before_TSS
25
19.5
11.1
1.75
3.03
0.0024
0.0186
112TF_ERnone
0
1
before_TSS
15
11.7
5.5
2.09
3.037
0.0023
0.0186
113TF_EVInone
0
1
after_TSS
15
11.7
3.1
3.76
5.632
0
0
114TF_FOXOnone
0
1
before_TSS
12
9.3
4.4
2.08
2.685
0.0072
0.0408
115TF_GABPnone
0
1
before_TSS
18
14
7.6
1.84
2.772
0.0055
0.0323
116TF_GRnone
0
1
after_TSS
13
10.1
3.3
3.03
4.306
0
0.0003
117TF_HEN1none
0
1
before_TSS
19
14.8
5.8
2.55
4.393
0
0.0001
118TF_HFHnone
0
1
before_TSS
12
9.3
4.8
1.92
2.389
0.0168
0.0858
119TF_HNF1none
0
1
before_TSS
13
10.1
4.2
2.38
3.317
0.0009
0.0079
120TF_HNF3none
0
1
before_TSS
15
11.7
6.4
1.82
2.453
0.0141
0.074
121TF_HNF4none
0
1
after_TSS
16
12.5
6.8
1.82
2.539
0.0111
0.0904
122TF_HNF4none
0
1
before_TSS
16
12.5
7.2
1.73
2.324
0.0201
0.0995
123TF_HSFnone
0
1
after_TSS
11
8.5
3.4
2.45
3.157
0.0015
0.0166
124TF_HTFnone
0
1
after_TSS
33
25.7
16
1.6
3.016
0.0025
0.0246
125TF_MAZRnone
1
0
before_TSS
40
31.2
13.5
2.31
5.907
0
0
126TF_MAZRnone
0
1
after_TSS
40
31.2
17.6
1.76
4.041
0
0.0009
127TF_MAZRnone
1
0
after_TSS
36
28.1
13.9
2.01
4.662
0
0.0011
128TF_MAZRnone
1
0
at_TSS
23
17.9
8.8
2.02
3.642
0.0002
0.0198
129TF_MEF2none
0
1
before_TSS
13
10.1
5
2.01
2.666
0.0076
0.0425
130TF_MYCnone
0
1
at_TSS
19
14.8
5.8
2.53
4.351
0
0.0008
131TF_MZFnone
0
1
at_TSS
13
10.1
3.4
2.97
4.224
0
0.0008
132TF_NF1none
0
1
after_TSS
27
21
7.2
2.91
6.075
0
0
133TF_NFKBnone
0
1
before_TSS
16
12.5
6.2
2.01
2.967
0.003
0.0215
134TF_NFYnone
0
1
at_TSS
33
25.7
12.9
1.98
4.339
0
0.0006
135TF_NFYnone
0
1
before_TSS
22
17.1
7.4
2.32
4.25
0
0.0002
136TF_NFYnone
0
1
after_TSS
11
8.5
3.9
2.18
2.727
0.0063
0.0544
137TF_OCTnone
0
1
before_TSS
18
14
4.8
2.88
4.852
0
0
138TF_OLF1none
0
1
after_TSS
29
22.6
12.7
1.77
3.374
0.0007
0.009
139TF_OLF1none
0
1
before_TSS
19
14.8
7.3
2.01
3.253
0.0011
0.0094
140TF_OLF1none
0
1
at_TSS
18
14
7.5
1.85
2.782
0.0054
0.0941
141TF_P300none
0
1
before_TSS
12
9.3
4.1
2.26
2.981
0.0028
0.021
142TF_PBXnone
0
1
at_TSS
16
12.5
3.7
3.35
5.268
0
0
143TF_PBXnone
0
1
before_TSS
15
11.7
5.5
2.12
3.081
0.002
0.0164
144TF_PBXnone
0
1
after_TSS
12
9.3
2.8
3.29
4.471
0
0.0002
145TF_POU3Fnone
0
1
before_TSS
22
17.1
4.8
3.54
6.531
0
0
146TF_POU6Fnone
0
1
before_TSS
11
8.5
3.7
2.31
2.938
0.0033
0.0228
147TF_RFXnone
0
1
after_TSS
22
17.1
8.7
1.96
3.401
0.0006
0.0087
148TF_S8none
0
1
before_TSS
14
10.9
5.2
2.09
2.915
0.0035
0.0241
149TF_S8none
0
1
at_TSS
10
7.8
2
3.87
4.69
0
0.0001
150TF_SOX9none
0
1
before_TSS
12
9.3
4.3
2.15
2.805
0.005
0.0297
151TF_SP1none
0
0
before_TSS
67
52.3
34
1.53
4.384
0
0.0005
152TF_SP1none
1
1
before_TSS
22
17.1
6.3
2.7
5.058
0
0
153TF_SREBPnone
1
0
before_TSS
26
20.3
9.2
2.18
4.325
0
0.0006
154TF_SREBPnone
0
1
before_TSS
25
19.5
7
2.76
5.54
0
0
155TF_SREBP1none
0
1
at_TSS
17
13.2
6
2.18
3.42
0.0006
0.0152
156TF_SRYnone
0
1
before_TSS
17
13.2
5.1
2.58
4.194
0
0.0003
157TF_STAFnone
0
1
after_TSS
21
16.4
5.2
3.1
5.658
0
0
158TF_STATnone
0
1
after_TSS
14
10.9
5
2.17
3.065
0.0021
0.0215
159TF_TATAnone
0
1
at_TSS
10
7.8
1.6
4.68
5.454
0
0
160TF_TSTnone
0
1
before_TSS
17
13.2
4.7
2.78
4.536
0
0.0001
161TF_XVENTnone
0
1
before_TSS
12
9.3
3.5
2.61
3.541
0.0003
0.004
162TF_ZICnone
0
1
after_TSS
18
14
7.4
1.89
2.877
0.004
0.0358
163TF_ZICnone
0
1
before_TSS
15
11.7
5
2.33
3.486
0.0004
0.0048
164TF_ZIDnone
0
1
after_TSS
17
13.2
6.7
1.97
2.987
0.0028
0.0264