CisView: Mouse (mm9, Jul 2007)
Transcription factor binding site ADD_AFP1

Source: Sawadaishi K, Morinaga T, Tamaoki T. 1988. Interaction of a hepatoma-specific nuclear factor with transcription-regulatory sequences of the human alpha-fetoprotein and albumin genes. Mol Cell Biol. 8: 5179-5187.
TF group: AFP1       TFBS class: HR = Hormone receptor       Code: 2.1.2.8.4
Pattern = TGATTAATAATTACA (used as matrix, core elements are bold)     Class: AFP1     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U046009Afpalpha fetoprotein

GO terms:
GO:0001542 ovulation from ovarian follicle
GO:0042448 progesterone metabolic process
GO:0005507 copper ion binding
GO:0016151 nickel ion binding
GO:0004566 beta-glucuronidase activity
GO:0005576 extracellular region
GO:0046872 metal ion binding
GO:0019953 sexual reproduction

Protein domains:
IPR014760 Serum albumin, N-terminal

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

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