CisView: Mouse (mm9, Jul 2007)
Transcription factor binding site ADD_CIZ

Source: Nakamoto T, Yamagata T, Sakai R, Ogawa S, Honda H, Ueno H, Hirano N, Yazaki Y, Hirai H. 2000. CIZ, a zinc finger protein that interacts with p130(cas) and activates the expression of matrix metalloproteinases. Mol Cell Biol. 20:1649-58.
TF group: CIZ       TFBS class: ZF = Zinc finger       Code: 2.3
Pattern = SAAAAAVYH (core elements are bold)     Class: CIZ     Allowed mismatch: 0.004
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Position weight matrix:
positionACGT
1
017220
2
39000
3
39000
4
39000
5
39000
6
39000
7
1510131
8
513615
9
91578

Genes (trans-elements):
U-clusterSymbol
Annotation
U001618Ciz1CDKN1A interacting zinc finger protein 1

GO terms:
GO:0009055 electron carrier activity
GO:0008270 zinc ion binding
GO:0006118 electron transport
GO:0020037 heme binding

Protein domains:
IPR003604 Zinc finger, U1-type
IPR005629 Beta-glucan synthesis-associated, SKN1
IPR008626 GAL11 transcriptional regulator
IPR007796 Herpes virus major outer envelope glycoprotein
IPR013863 Vacuolar import and degradation, Vid27-related
IPR007813 Fimbrial assembly
IPR008781 Pneumovirinae attachment membrane glycoprotein G

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

Legend