CisView: Mouse (mm9, Jul 2007)
Transcription factor binding site ADD_OCT4A

Source: Nishimoto M, Miyagi S, Katayanagi T, Tomioka M, Muramatsu M, Okuda A. 2003. The embryonic Octamer factor 3/4 displays distinct DNA binding specificity from those of other Octamer factors. Biochem Biophys Res Commun. 302(3):581-586.
TF group: OCT       TFBS class: POU = Octamer (POU)       Code: 3.1.2
Pattern = ATGCTRDW     Class: OCT     Allowed mismatch: 0
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U017906Pou5f1POU domain, class 5, transcription factor 1

GO terms:
GO:0043565 sequence-specific DNA binding
GO:0030718 germ-line stem cell maintenance
GO:0045892 negative regulation of transcription, DNA-dependent

Protein domains:
IPR001356 Homeobox
IPR000327 POU-specific

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

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