CisView: Mouse (mm9, Jul 2007)
Transcription factor binding site ADD_PAX1

Source: Chalepakis G, Fritsch R, Fickenscher H, Deutsch U, Goulding M, Gruss P. 1991. The molecular basis of the undulated/Pax-1 mutation. Cell. 66:873-84.
TF group: PAX1       TFBS class: PAX = Paired box       Code: 3.2.2.1.1
Pattern = CCGTTCCGCTCTAGATAT (used as matrix, core elements are bold)     Class: PAX1     Allowed mismatch: 0.2
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U002594Pax1paired box gene 1

GO terms:
GO:0009887 organ morphogenesis
GO:0007389 pattern specification process
GO:0001756 somitogenesis
GO:0048538 thymus development
GO:0043374 CD8-positive, alpha-beta T cell differentiation
GO:0001501 skeletal development
GO:0060017 parathyroid gland development
GO:0043367 CD4-positive, alpha beta T cell differentiation
GO:0007275 multicellular organismal development

Protein domains:
IPR001523 Paired box protein, N-terminal

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

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