CisView: Mouse (mm9, Jul 2007)
Transcription factor binding site ADD_SRF

Source: Pellegrini, L., Tan, S., Richmond, T. 1995.Structure of serum response factor core bound to DNA. Nature 376:489-498.
TF group: SRF       TFBS class: MADS = MADS box       Code: 4.4.2.0.1
Pattern = CCTAATTAGG (used as matrix, core elements are bold)     Class: SRF     Allowed mismatch: 0.2     Palindrome
Overlap with other TFBS Open table
GO-annotations for traget genes Open table

Genes (trans-elements):
U-clusterSymbol
Annotation
U037861Srfserum response factor

GO terms:
GO:0001829 trophectodermal cell differentiation
GO:0043565 sequence-specific DNA binding
GO:0007507 heart development
GO:0001947 heart looping
GO:0045597 positive regulation of cell differentiation
GO:0046716 muscle maintenance
GO:0007275 multicellular organismal development

Protein domains:
IPR002100 Transcription factor, MADS-box

Frequency distribution in CpG-rich and CpG-poor promoters (per 1Mb)

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