TFBS for Gene Ontology term GO:0003676

CisView Mouse (mm9, Jul 2007)

TFBS for Gene Ontology term GO:0003676 nucleic acid binding

Number of genes with GO:0003676 = 2235
Total number of genes = 33897

No.	TF1	TF2	Multi- ple	Conser- ved	Location	Hits in list	Genes with TFBS in list, %	Genes with TFBS total, %	Ratio	z	p	FDR
1	ADD_CTCFA	none	0	0	after_TSS	275	12.3	6.6	1.86	11.231	0	0
2	ADD_CTCFA	none	0	0	at_TSS	187	8.3	4.3	1.93	9.709	0	0
3	ADD_CTCFA	none	0	0	before_TSS	157	7	4.3	1.62	6.51	0	0
4	ADD_CTCFB	none	0	0	at_TSS	114	5.1	3.3	1.5	4.614	0	0
5	ADD_GCNF	none	0	1	after_TSS	179	8	5	1.58	6.582	0	0
6	ADD_HMG	none	0	1	after_TSS	300	13.4	7.9	1.68	9.887	0	0
7	ADD_HMG	none	0	1	at_TSS	161	7.2	4.7	1.52	5.736	0	0
8	ADD_LRH	none	0	1	after_TSS	191	8.5	5.1	1.66	7.581	0	0
9	ADD_MTF1A	none	0	0	at_TSS	164	7.3	4.4	1.63	6.708	0	0
10	ADD_MTF1B	none	0	0	after_TSS	348	15.5	9.8	1.58	9.468	0	0
11	ADD_NANOG1	none	0	1	before_TSS	158	7	4.3	1.61	6.397	0	0
12	ADD_NANOG1	none	0	1	after_TSS	134	5.9	3.7	1.59	5.743	0	0
13	ADD_NCX	none	0	1	after_TSS	163	7.2	3.9	1.85	8.425	0	0
14	ADD_PU1	none	0	1	after_TSS	367	16.4	8.4	1.94	14.012	0	0
15	ADD_PU1	none	0	1	at_TSS	194	8.6	5.4	1.6	7.036	0	0
16	ADD_SF1B	none	0	1	after_TSS	170	7.6	4.4	1.71	7.509	0	0
17	ADD_SMAD	none	0	0	after_TSS	551	24.6	9.7	2.53	24.673	0	0
18	ADD_SMAD	none	0	0	at_TSS	288	12.8	6.4	2	12.913	0	0
19	ADD_SMAD	none	0	0	before_TSS	165	7.3	4.1	1.78	8.005	0	0
20	ADD_SMAD	none	1	1	after_TSS	128	5.7	1.5	3.79	16.938	0	0
21	ADD_WHN	none	0	0	after_TSS	492	22	12.3	1.78	14.421	0	0
22	ADD_WHN	none	0	0	before_TSS	398	17.8	11.5	1.53	9.532	0	0
23	ADD_WHN	none	0	0	at_TSS	329	14.7	7.8	1.86	12.434	0	0
24	ADD_ZF5	none	0	0	after_TSS	444	19.8	8.8	2.25	19.106	0	0
25	ADD_ZF5	none	0	0	at_TSS	340	15.2	7.7	1.95	13.528	0	0
26	ADD_ZF5	none	0	0	before_TSS	262	11.7	6	1.93	11.645	0	0
27	MIT_001NRF1	none	0	0	at_TSS	293	13.1	5.7	2.26	15.297	0	0
28	MIT_001NRF1	none	0	0	before_TSS	130	5.8	2.6	2.19	9.661	0	0
29	MIT_003ELK	none	0	0	at_TSS	406	18.1	8.1	2.21	17.779	0	0
30	MIT_003ELK	none	0	0	after_TSS	255	11.4	5.8	1.94	11.56	0	0
31	MIT_003ELK	none	0	0	before_TSS	208	9.3	5	1.85	9.598	0	0
32	MIT_005NFY	none	0	0	at_TSS	327	14.6	8.4	1.73	10.892	0	0
33	MIT_006SP1	none	0	0	at_TSS	1098	49.1	26.6	1.84	24.882	0	0
34	MIT_006SP1	none	0	0	after_TSS	920	41.1	21.1	1.94	24.011	0	0
35	MIT_006SP1	none	0	0	before_TSS	761	34	18.8	1.8	18.997	0	0
36	MIT_006SP1	none	1	1	at_TSS	171	7.6	3.1	2.39	12.393	0	0
37	MIT_010YY1	none	0	0	after_TSS	149	6.6	3.4	1.94	8.706	0	0
38	MIT_010YY1	none	0	0	at_TSS	131	5.8	2.5	2.28	10.22	0	0
39	MIT_011GABP	none	0	0	at_TSS	259	11.5	6.1	1.87	10.993	0	0
40	MIT_012MYOD	none	0	1	after_TSS	390	17.4	10.1	1.72	11.852	0	0
41	MIT_013LEF	none	0	1	after_TSS	228	10.2	6.1	1.64	8.144	0	0
42	MIT_015AP4	none	0	1	after_TSS	235	10.5	6.5	1.6	7.825	0	0
43	MIT_017IRF	none	0	1	after_TSS	190	8.5	4.7	1.8	8.72	0	0
44	MIT_019	none	0	0	after_TSS	157	7	3.7	1.85	8.261	0	0
45	MIT_019	none	0	0	at_TSS	146	6.5	3	2.15	9.982	0	0
46	MIT_020E4F1	none	0	0	at_TSS	264	11.8	5.8	2.03	12.544	0	0
47	MIT_021	none	0	0	after_TSS	209	9.3	4.4	2.08	11.492	0	0
48	MIT_021	none	0	0	at_TSS	185	8.2	4.1	2.01	10.302	0	0
49	MIT_021	none	0	0	before_TSS	181	8	4.9	1.64	7.194	0	0
50	MIT_022	none	0	0	at_TSS	280	12.5	5.8	2.14	13.909	0	0
51	MIT_022	none	0	0	before_TSS	197	8.8	5.1	1.71	8.098	0	0
52	MIT_022	none	0	0	after_TSS	173	7.7	4.4	1.73	7.781	0	0
53	MIT_030	none	0	0	at_TSS	210	9.3	4.6	2.04	11.18	0	0
54	MIT_030	none	0	0	after_TSS	175	7.8	3.5	2.22	11.454	0	0
55	MIT_030	none	0	0	before_TSS	142	6.3	3.2	1.97	8.724	0	0
56	MIT_035MYOD	none	0	1	after_TSS	174	7.7	4.7	1.63	6.954	0	0
57	MIT_036FOXO	none	0	1	before_TSS	126	5.6	3.6	1.56	5.343	0	0
58	MIT_041MEIS	none	0	1	after_TSS	115	5.1	2.9	1.75	6.416	0	0
59	MIT_073LEF	none	0	1	after_TSS	175	7.8	4.9	1.58	6.553	0	0
60	MIT_076AREB6	none	0	1	after_TSS	282	12.6	7.4	1.68	9.534	0	0
61	MIT_081	none	0	0	after_TSS	426	19	9.8	1.92	15.035	0	0
62	MIT_081	none	0	0	at_TSS	287	12.8	7.3	1.74	10.251	0	0
63	MIT_102	none	0	0	after_TSS	115	5.1	3.3	1.52	4.825	0	0
64	NCBI_003	none	0	0	before_TSS	180	8	5.2	1.53	6.178	0	0
65	TF_AHR	none	0	0	after_TSS	413	18.4	10.9	1.68	11.761	0	0
66	TF_AHR	none	0	0	at_TSS	290	12.9	7.7	1.67	9.608	0	0
67	TF_AP2	none	0	0	after_TSS	455	20.3	10.6	1.91	15.479	0	0
68	TF_AP2	none	0	0	at_TSS	193	8.6	5.5	1.56	6.649	0	0
69	TF_AP2A	none	0	0	after_TSS	476	21.2	12	1.76	13.922	0	0
70	TF_ATF1	none	0	0	at_TSS	346	15.4	8.2	1.87	12.801	0	0
71	TF_ATF6	none	0	0	at_TSS	328	14.6	9	1.61	9.505	0	0
72	TF_BARBIE	none	0	1	after_TSS	127	5.6	3	1.83	7.332	0	0
73	TF_CREB	none	0	0	at_TSS	501	22.4	12.5	1.78	14.597	0	0
74	TF_E2F	none	0	0	after_TSS	239	10.6	4.9	2.17	13.033	0	0
75	TF_E2F	none	0	0	before_TSS	221	9.8	5.6	1.74	8.929	0	0
76	TF_E2F	none	0	0	at_TSS	163	7.2	3	2.35	11.845	0	0
77	TF_E4BP4	none	0	1	before_TSS	152	6.8	4.4	1.53	5.659	0	0
78	TF_EGR1	none	0	0	after_TSS	544	24.3	12.4	1.95	17.555	0	0
79	TF_EGR1	none	0	0	at_TSS	335	14.9	8.6	1.72	10.921	0	0
80	TF_ELK	none	0	0	at_TSS	537	24	11.2	2.14	19.864	0	0
81	TF_ELK	none	0	0	after_TSS	387	17.3	9.3	1.84	13.358	0	0
82	TF_ELK	none	0	0	before_TSS	336	15	9.3	1.61	9.576	0	0
83	TF_ER	none	0	1	after_TSS	150	6.7	4.2	1.58	6.01	0	0
84	TF_ETS	none	0	0	at_TSS	547	24.4	13.2	1.84	16.144	0	0
85	TF_FOXO	none	0	1	before_TSS	149	6.6	4.4	1.5	5.305	0	0
86	TF_GABP	none	0	0	at_TSS	548	24.5	12.1	2.01	18.439	0	0
87	TF_GABP	none	0	0	after_TSS	467	20.8	11.3	1.84	14.733	0	0
88	TF_GABP	none	0	0	before_TSS	400	17.8	11.5	1.54	9.635	0	0
89	TF_HMX	none	0	1	after_TSS	136	6	3.3	1.81	7.452	0	0
90	TF_HNF4	none	0	1	after_TSS	177	7.9	4.5	1.74	7.968	0	0
91	TF_HSF	none	0	1	after_TSS	112	5	2.8	1.72	6.165	0	0
92	TF_IRF	none	0	1	after_TSS	138	6.1	3.9	1.55	5.538	0	0
93	TF_MAZR	none	0	0	after_TSS	381	17	8.7	1.94	14.311	0	0
94	TF_MAZR	none	0	0	at_TSS	289	12.9	7.4	1.73	10.241	0	0
95	TF_MEIS	none	0	1	after_TSS	218	9.7	5.6	1.73	8.813	0	0
96	TF_MEIS	none	0	1	at_TSS	130	5.8	3.6	1.6	5.713	0	0
97	TF_MYC	none	0	1	after_TSS	133	5.9	3	1.92	8.067	0	0
98	TF_MYOD	none	0	1	after_TSS	127	5.6	3.4	1.64	5.935	0	0
99	TF_NFY	none	0	0	at_TSS	606	27.1	17.4	1.55	12.492	0	0
100	TF_OCT	none	0	1	after_TSS	117	5.2	3.2	1.63	5.62	0	0
101	TF_PAX3	none	0	0	after_TSS	368	16.4	9.2	1.77	12.077	0	0
102	TF_PAX3	none	0	0	at_TSS	175	7.8	4.9	1.59	6.57	0	0
103	TF_POLYA	none	0	1	before_TSS	173	7.7	5.1	1.51	5.803	0	0
104	TF_RFX	none	0	1	after_TSS	178	7.9	4.8	1.63	7.029	0	0
105	TF_RFX1	none	0	1	after_TSS	225	10	5.7	1.75	9.113	0	0
106	TF_SP1	none	0	0	at_TSS	749	33.5	19	1.76	18.063	0	0
107	TF_SP1	none	0	0	after_TSS	531	23.7	12	1.97	17.678	0	0
108	TF_SP1	none	0	0	before_TSS	505	22.5	12.4	1.82	15.126	0	0
109	TF_SREBP1	none	0	1	after_TSS	216	9.6	5.6	1.72	8.615	0	0
110	TF_SREBP1	none	0	1	at_TSS	151	6.7	3.3	2.01	9.218	0	0
111	TF_STAF	none	0	1	after_TSS	145	6.4	3	2.16	9.986	0	0
112	TF_STAT	none	0	1	after_TSS	142	6.3	3.6	1.76	7.222	0	0
113	TF_TAXCREB1	none	0	0	after_TSS	407	18.2	10.6	1.71	12	0	0
114	TF_TAXCREB1	none	0	0	at_TSS	331	14.8	7.9	1.87	12.507	0	0
115	TF_TGIF	none	0	1	after_TSS	120	5.3	3.2	1.67	6.003	0	0
116	TF_YY1	none	0	1	before_TSS	152	6.8	4	1.67	6.795	0	0