TFBS for Gene Ontology term GO:0003677

CisView Mouse (mm9, Jul 2007)

TFBS for Gene Ontology term GO:0003677 DNA binding

Number of genes with GO:0003677 = 1465
Total number of genes = 33897

No.	TF1	TF2	Multi- ple	Conser- ved	Location	Hits in list	Genes with TFBS in list, %	Genes with TFBS total, %	Ratio	z	p	FDR
1	ADD_CTCFA	none	0	0	after_TSS	190	12.9	6.6	1.96	10.032	0	0
2	ADD_CTCFA	none	0	0	at_TSS	131	8.9	4.3	2.06	8.873	0	0
3	ADD_CTCFA	none	0	0	before_TSS	109	7.4	4.3	1.72	6.008	0	0
4	ADD_FOXP1	none	0	1	before_TSS	122	8.3	4.9	1.69	6.212	0	0
5	ADD_GCNF	none	0	1	after_TSS	126	8.6	5	1.69	6.322	0	0
6	ADD_HMG	none	0	1	after_TSS	200	13.6	7.9	1.71	8.24	0	0
7	ADD_HMG	none	0	1	at_TSS	122	8.3	4.7	1.76	6.663	0	0
8	ADD_LRH	none	0	1	after_TSS	138	9.4	5.1	1.83	7.615	0	0
9	ADD_MEF3	none	0	1	after_TSS	85	5.8	2.7	2.14	7.48	0	0
10	ADD_MTF1A	none	0	0	at_TSS	107	7.3	4.4	1.62	5.302	0	0
11	ADD_MTF1B	none	0	0	after_TSS	248	16.9	9.8	1.72	9.36	0	0
12	ADD_NANOG	none	0	1	before_TSS	81	5.5	3.3	1.65	4.776	0	0
13	ADD_NANOG1	none	0	1	before_TSS	112	7.6	4.3	1.74	6.217	0	0
14	ADD_NANOG1	none	0	1	after_TSS	92	6.2	3.7	1.66	5.179	0	0
15	ADD_NANOG1	none	0	1	at_TSS	79	5.3	2.6	1.99	6.513	0	0
16	ADD_NCX	none	0	1	after_TSS	111	7.5	3.9	1.92	7.31	0	0
17	ADD_NCX	none	0	1	before_TSS	101	6.8	4	1.69	5.589	0	0
18	ADD_PU1	none	0	1	after_TSS	249	16.9	8.4	2.01	12.019	0	0
19	ADD_PU1	none	0	1	at_TSS	145	9.8	5.4	1.82	7.732	0	0
20	ADD_SF1B	none	0	1	after_TSS	117	7.9	4.4	1.79	6.729	0	0
21	ADD_SMAD	none	0	0	after_TSS	364	24.8	9.7	2.55	19.992	0	0
22	ADD_SMAD	none	0	0	at_TSS	200	13.6	6.4	2.12	11.553	0	0
23	ADD_SMAD	none	0	0	before_TSS	126	8.6	4.1	2.08	8.799	0	0
24	ADD_SMAD	none	1	1	after_TSS	89	6	1.5	4.02	14.667	0	0
25	ADD_TEF1	none	0	1	after_TSS	97	6.6	4.2	1.55	4.574	0	0
26	ADD_WHN	none	0	0	after_TSS	315	21.5	12.3	1.74	10.927	0	0
27	ADD_WHN	none	0	0	before_TSS	274	18.7	11.5	1.61	8.72	0	0
28	ADD_WHN	none	0	0	at_TSS	215	14.6	7.8	1.86	9.882	0	0
29	ADD_ZF5	none	0	0	after_TSS	321	21.9	8.8	2.48	18.109	0	0
30	ADD_ZF5	none	0	0	at_TSS	234	15.9	7.7	2.04	11.931	0	0
31	ADD_ZF5	none	0	0	before_TSS	203	13.8	6	2.29	12.818	0	0
32	MIT_001NRF1	none	0	0	at_TSS	165	11.2	5.7	1.94	9.145	0	0
33	MIT_001NRF1	none	0	0	before_TSS	96	6.5	2.6	2.47	9.523	0	0
34	MIT_002MYC	none	0	0	at_TSS	131	8.9	5.9	1.5	4.954	0	0
35	MIT_003ELK	none	0	0	at_TSS	203	13.8	8.1	1.69	8.076	0	0
36	MIT_003ELK	none	0	0	after_TSS	141	9.6	5.8	1.64	6.274	0	0
37	MIT_003ELK	none	0	0	before_TSS	133	9	5	1.8	7.27	0	0
38	MIT_005NFY	none	0	0	at_TSS	235	16	8.4	1.9	10.698	0	0
39	MIT_006SP1	none	0	0	at_TSS	744	50.7	26.6	1.9	21.372	0	0
40	MIT_006SP1	none	0	0	after_TSS	617	42.1	21.1	1.99	20.121	0	0
41	MIT_006SP1	none	0	0	before_TSS	538	36.7	18.8	1.94	17.872	0	0
42	MIT_006SP1	none	1	1	at_TSS	122	8.3	3.1	2.6	11.42	0	0
43	MIT_006SP1	none	1	1	after_TSS	80	5.4	1.5	3.49	12.312	0	0
44	MIT_006SP1	none	1	1	before_TSS	76	5.1	1.7	2.93	10.158	0	0
45	MIT_009ATF	none	0	0	at_TSS	83	5.6	3.7	1.5	3.878	0.0001	0.0006
46	MIT_011GABP	none	0	0	at_TSS	137	9.3	6.1	1.51	5.158	0	0
47	MIT_012MYOD	none	0	1	after_TSS	267	18.2	10.1	1.79	10.486	0	0
48	MIT_013LEF	none	0	1	after_TSS	159	10.8	6.1	1.75	7.573	0	0
49	MIT_013LEF	none	0	1	at_TSS	88	6	3.6	1.66	5.008	0	0
50	MIT_015AP4	none	0	1	after_TSS	173	11.8	6.5	1.8	8.306	0	0
51	MIT_016ETS	none	0	1	before_TSS	80	5.4	3.4	1.59	4.387	0	0
52	MIT_016ETS	none	0	1	after_TSS	79	5.3	3	1.75	5.246	0	0
53	MIT_017IRF	none	0	1	after_TSS	144	9.8	4.7	2.08	9.427	0	0
54	MIT_017IRF	none	0	1	at_TSS	80	5.4	2.6	2.05	6.817	0	0
55	MIT_019	none	0	0	after_TSS	106	7.2	3.7	1.9	7.04	0	0
56	MIT_019	none	0	0	at_TSS	79	5.3	3	1.77	5.384	0	0
57	MIT_019	none	0	0	before_TSS	77	5.2	3.3	1.56	4.116	0	0.0002
58	MIT_020E4F1	none	0	0	at_TSS	160	10.9	5.8	1.87	8.545	0	0
59	MIT_021	none	0	0	after_TSS	123	8.3	4.4	1.87	7.388	0	0
60	MIT_021	none	0	0	before_TSS	116	7.9	4.9	1.61	5.429	0	0
61	MIT_021	none	0	0	at_TSS	99	6.7	4.1	1.64	5.242	0	0
62	MIT_022	none	0	0	at_TSS	153	10.4	5.8	1.78	7.652	0	0
63	MIT_022	none	0	0	before_TSS	141	9.6	5.1	1.86	7.912	0	0
64	MIT_022	none	0	0	after_TSS	113	7.7	4.4	1.73	6.173	0	0
65	MIT_024MAZ	none	0	0	after_TSS	586	40	25.9	1.54	12.548	0	0
66	MIT_024MAZ	none	0	0	at_TSS	489	33.3	21.3	1.56	11.489	0	0
67	MIT_029	none	0	1	before_TSS	100	6.8	4.1	1.63	5.18	0	0
68	MIT_030	none	0	0	after_TSS	120	8.1	3.5	2.32	9.93	0	0
69	MIT_030	none	0	0	at_TSS	120	8.1	4.6	1.77	6.694	0	0
70	MIT_030	none	0	0	before_TSS	104	7	3.2	2.21	8.634	0	0
71	MIT_036FOXO	none	0	1	before_TSS	97	6.6	3.6	1.83	6.339	0	0
72	MIT_041MEIS	none	0	1	before_TSS	85	5.8	3.4	1.65	4.904	0	0
73	MIT_041MEIS	none	0	1	after_TSS	81	5.5	2.9	1.88	6.022	0	0
74	MIT_046	none	0	0	at_TSS	142	9.6	6.1	1.58	5.829	0	0
75	MIT_047NFY	none	0	1	before_TSS	85	5.8	3.7	1.56	4.32	0	0.0001
76	MIT_051TATA	none	0	1	at_TSS	77	5.2	2.7	1.92	6.069	0	0
77	MIT_055NFAT	none	0	1	after_TSS	148	10.1	6.7	1.5	5.279	0	0
78	MIT_055NFAT	none	0	1	at_TSS	90	6.1	4	1.51	4.132	0	0.0001
79	MIT_073LEF	none	0	1	after_TSS	120	8.1	4.9	1.66	5.895	0	0
80	MIT_073LEF	none	0	1	at_TSS	74	5	2.7	1.83	5.507	0	0
81	MIT_076AREB6	none	0	1	after_TSS	190	12.9	7.4	1.73	8.15	0	0
82	MIT_081	none	0	0	after_TSS	274	18.7	9.8	1.89	11.559	0	0
83	MIT_081	none	0	0	before_TSS	213	14.5	8.9	1.62	7.665	0	0
84	MIT_081	none	0	0	at_TSS	190	12.9	7.3	1.76	8.392	0	0
85	MIT_083HNF3	none	0	1	after_TSS	76	5.1	2.7	1.9	5.905	0	0
86	MIT_130OLF1	none	0	0	after_TSS	154	10.5	6.7	1.55	5.856	0	0
87	MIT_155	none	0	1	before_TSS	107	7.3	4.6	1.55	4.822	0	0
88	TF_AHR	none	0	0	before_TSS	287	19.5	12.5	1.56	8.311	0	0
89	TF_AHR	none	0	0	after_TSS	269	18.3	10.9	1.67	9.262	0	0
90	TF_AHR	none	0	0	at_TSS	186	12.6	7.7	1.64	7.277	0	0
91	TF_AP2	none	0	0	after_TSS	315	21.5	10.6	2.02	13.835	0	0
92	TF_AP2	none	0	0	before_TSS	187	12.7	7.9	1.6	6.995	0	0
93	TF_AP2	none	0	0	at_TSS	145	9.8	5.5	1.79	7.48	0	0
94	TF_AP2A	none	0	0	after_TSS	312	21.2	12	1.76	11.136	0	0
95	TF_AP2A	none	0	0	before_TSS	237	16.1	9.6	1.67	8.64	0	0
96	TF_AP2A	none	0	0	at_TSS	143	9.7	6.2	1.57	5.745	0	0
97	TF_AP4	none	0	1	after_TSS	111	7.5	4.7	1.59	5.214	0	0
98	TF_ARP1	none	0	1	after_TSS	76	5.1	2.8	1.81	5.488	0	0
99	TF_ATF1	none	0	0	at_TSS	217	14.8	8.2	1.79	9.29	0	0
100	TF_ATF6	none	0	0	at_TSS	210	14.3	9	1.57	7.139	0	0
101	TF_BARBIE	none	0	1	after_TSS	85	5.8	3	1.87	6.136	0	0
102	TF_CEBP	none	0	1	before_TSS	92	6.2	3.7	1.69	5.325	0	0
103	TF_CREB	none	0	0	at_TSS	306	20.8	12.5	1.66	9.87	0	0
104	TF_CREB	none	0	1	after_TSS	96	6.5	3.1	2.05	7.51	0	0
105	TF_E2F	none	0	0	before_TSS	157	10.7	5.6	1.89	8.545	0	0
106	TF_E2F	none	0	0	after_TSS	155	10.5	4.9	2.14	10.221	0	0
107	TF_E2F	none	0	0	at_TSS	111	7.5	3	2.44	10.116	0	0
108	TF_E4BP4	none	0	1	before_TSS	107	7.3	4.4	1.65	5.484	0	0
109	TF_EGR1	none	0	0	after_TSS	349	23.8	12.4	1.9	13.431	0	0
110	TF_EGR1	none	0	0	before_TSS	255	17.4	11.5	1.5	7.152	0	0
111	TF_EGR1	none	0	0	at_TSS	214	14.6	8.6	1.67	8.207	0	0
112	TF_ELK	none	0	0	at_TSS	293	20	11.2	1.78	10.896	0	0
113	TF_ELK	none	0	0	before_TSS	220	15	9.3	1.6	7.638	0	0
114	TF_ELK	none	0	0	after_TSS	215	14.6	9.3	1.56	7.14	0	0
115	TF_ER	none	0	1	after_TSS	95	6.4	4.2	1.53	4.367	0	0
116	TF_ER	none	0	1	before_TSS	94	6.4	4.2	1.5	4.171	0	0.0001
117	TF_ETS	none	0	0	at_TSS	301	20.5	13.2	1.54	8.384	0	0
118	TF_FAC1	none	0	1	before_TSS	92	6.2	3.5	1.77	5.809	0	0
119	TF_FOXA	none	0	1	before_TSS	154	10.5	6.8	1.54	5.729	0	0
120	TF_FOXD	none	0	1	before_TSS	125	8.5	4.8	1.75	6.685	0	0
121	TF_FOXD1	none	0	1	before_TSS	128	8.7	5.4	1.6	5.695	0	0
122	TF_FOXO	none	0	1	before_TSS	114	7.7	4.4	1.75	6.363	0	0
123	TF_GABP	none	0	0	at_TSS	297	20.2	12.1	1.66	9.672	0	0
124	TF_GABP	none	0	0	after_TSS	271	18.4	11.3	1.63	8.828	0	0
125	TF_GABP	none	0	0	before_TSS	260	17.7	11.5	1.53	7.525	0	0
126	TF_GFI	none	0	1	before_TSS	101	6.8	4.4	1.53	4.549	0	0
127	TF_GFI	none	0	1	after_TSS	78	5.3	3	1.75	5.219	0	0
128	TF_HMX	none	0	1	after_TSS	95	6.4	3.3	1.93	6.831	0	0
129	TF_HNF4	none	0	1	after_TSS	112	7.6	4.5	1.68	5.857	0	0
130	TF_HOXA5	none	0	1	before_TSS	88	6	3.9	1.53	4.198	0	0.0001
131	TF_HSF	none	0	1	after_TSS	77	5.2	2.8	1.81	5.503	0	0
132	TF_MAF	none	0	1	before_TSS	85	5.8	3.7	1.55	4.281	0	0.0001
133	TF_MAZR	none	0	0	before_TSS	320	21.8	13.1	1.66	10.062	0	0
134	TF_MAZR	none	0	0	after_TSS	279	19	8.7	2.17	14.211	0	0
135	TF_MAZR	none	0	0	at_TSS	212	14.4	7.4	1.94	10.489	0	0
136	TF_MEIS	none	0	1	after_TSS	146	9.9	5.6	1.77	7.411	0	0
137	TF_MEIS	none	0	1	at_TSS	102	6.9	3.6	1.91	6.967	0	0
138	TF_MRF2	none	0	1	before_TSS	83	5.6	3.6	1.54	4.145	0	0.0001
139	TF_MYC	none	0	1	after_TSS	77	5.2	3	1.69	4.883	0	0
140	TF_MYOD	none	0	1	after_TSS	94	6.4	3.4	1.85	6.319	0	0
141	TF_NFY	none	0	0	at_TSS	425	29	17.4	1.66	11.949	0	0
142	TF_OCT	none	0	1	after_TSS	78	5.3	3.2	1.65	4.694	0	0
143	TF_OLF1	none	0	1	after_TSS	83	5.6	2.7	2.07	7.063	0	0
144	TF_PAX3	none	0	0	after_TSS	230	15.6	9.2	1.68	8.629	0	0
145	TF_PAX3	none	0	0	at_TSS	116	7.9	4.9	1.6	5.415	0	0
146	TF_PAX4	none	0	1	after_TSS	100	6.8	2.8	2.41	9.455	0	0
147	TF_PBX	none	0	1	at_TSS	85	5.8	2.8	2.02	6.901	0	0
148	TF_POLYA	none	0	1	before_TSS	131	8.9	5.1	1.74	6.774	0	0
149	TF_POU3F	none	0	1	before_TSS	121	8.2	5.3	1.54	5.049	0	0
150	TF_POU3F	none	0	1	at_TSS	74	5	2.1	2.3	7.654	0	0
151	TF_RFX	none	0	1	after_TSS	121	8.2	4.8	1.69	6.16	0	0
152	TF_RFX1	none	0	1	after_TSS	150	10.2	5.7	1.78	7.579	0	0
153	TF_SOX9	none	0	1	before_TSS	106	7.2	4.7	1.53	4.675	0	0
154	TF_SOX9	none	0	1	after_TSS	77	5.2	2.9	1.76	5.266	0	0
155	TF_SP1	none	0	0	at_TSS	520	35.4	19	1.86	16.426	0	0
156	TF_SP1	none	0	0	before_TSS	373	25.4	12.4	2.05	15.502	0	0
157	TF_SP1	none	0	0	after_TSS	364	24.8	12	2.06	15.451	0	0
158	TF_SREBP1	none	0	1	after_TSS	133	9	5.6	1.61	5.895	0	0
159	TF_SREBP1	none	0	1	at_TSS	115	7.8	3.3	2.33	9.748	0	0
160	TF_STAF	none	0	1	after_TSS	94	6.4	3	2.13	7.825	0	0
161	TF_STAF	none	0	1	before_TSS	75	5.1	3.3	1.5	3.732	0.0001	0.0008
162	TF_STAT	none	0	1	after_TSS	95	6.4	3.6	1.8	6.053	0	0
163	TF_TAXCREB1	none	0	0	after_TSS	274	18.7	10.6	1.75	10.225	0	0
164	TF_TAXCREB1	none	0	0	before_TSS	272	18.5	11.2	1.64	9.02	0	0
165	TF_TAXCREB1	none	0	0	at_TSS	211	14.4	7.9	1.82	9.414	0	0
166	TF_TGIF	none	0	1	before_TSS	102	6.9	4.2	1.64	5.273	0	0
167	TF_TGIF	none	0	1	after_TSS	84	5.7	3.2	1.78	5.612	0	0
168	TF_YY1	none	0	1	after_TSS	177	12	5.9	2.01	10.055	0	0
169	TF_YY1	none	0	1	at_TSS	112	7.6	4.1	1.84	6.879	0	0
170	TF_YY1	none	0	1	before_TSS	99	6.7	4	1.66	5.35	0	0