CisView Mouse (mm9, Jul 2007)

TFBS for Gene Ontology term GO:0003723 RNA binding

Number of genes with GO:0003723 = 518
Total number of genes = 33897
No.TF1TF2
Multi-
ple
Conser-
ved
Location
Hits
in list
Genes with TFBS
in list, %
Genes with TFBS
total, %
Ratio
z
p
FDR
1ADD_ARnone
0
1
after_TSS
36
6.9
2.6
2.66
6.248
0
0
2ADD_CTCFAnone
0
0
after_TSS
59
11.3
6.6
1.72
4.421
0
0
3ADD_CTCFAnone
0
0
at_TSS
46
8.8
4.3
2.05
5.131
0
0
4ADD_CTCFAnone
0
0
before_TSS
36
6.9
4.3
1.6
2.968
0.0029
0.0234
5ADD_CTCFBnone
0
0
at_TSS
30
5.7
3.3
1.7
3.039
0.0023
0.0148
6ADD_HELIOSnone
0
1
after_TSS
30
5.7
1.9
2.9
6.238
0
0
7ADD_HIF1none
0
0
after_TSS
31
5.9
3
1.94
3.872
0.0001
0.0008
8ADD_HMGnone
0
1
after_TSS
82
15.8
7.9
1.99
6.676
0
0
9ADD_HOGNESSnone
0
0
before_TSS
74
14.2
7.6
1.85
5.683
0
0
10ADD_LRHnone
0
1
after_TSS
44
8.4
5.1
1.65
3.501
0.0004
0.0033
11ADD_MTF1Anone
0
0
after_TSS
50
9.6
6.3
1.51
3.09
0.002
0.0132
12ADD_MTF1Anone
0
0
at_TSS
40
7.7
4.4
1.71
3.57
0.0003
0.0026
13ADD_MTF1Bnone
0
0
after_TSS
77
14.8
9.8
1.51
3.895
0
0.0007
14ADD_NANOGnone
0
1
after_TSS
27
5.2
2.3
2.19
4.274
0
0.0002
15ADD_NCXnone
0
1
after_TSS
40
7.7
3.9
1.95
4.456
0
0.0001
16ADD_PU1none
0
1
after_TSS
85
16.4
8.4
1.94
6.56
0
0
17ADD_SF1Anone
0
0
before_TSS
79
15.2
10
1.52
3.996
0
0.0009
18ADD_SF1Bnone
0
1
after_TSS
41
7.9
4.4
1.78
3.864
0.0001
0.0009
19ADD_SMADnone
0
0
after_TSS
144
27.7
9.7
2.86
14.005
0
0
20ADD_SMADnone
0
0
at_TSS
64
12.3
6.4
1.92
5.558
0
0
21ADD_SMADnone
1
1
after_TSS
27
5.2
1.5
3.45
6.973
0
0
22ADD_TANTIGENnone
0
0
before_TSS
84
16.2
10.4
1.54
4.285
0
0.0002
23ADD_TELnone
0
0
at_TSS
26
5
2.7
1.8
3.131
0.0017
0.0113
24ADD_WHNnone
0
0
after_TSS
133
25.6
12.3
2.08
9.317
0
0
25ADD_WHNnone
0
0
at_TSS
83
16
7.8
2.03
6.939
0
0
26ADD_ZF5none
0
0
after_TSS
90
17.3
8.8
1.97
6.941
0
0
27ADD_ZF5none
0
0
at_TSS
83
16
7.7
2.05
7.036
0
0
28MIT_001NRF1none
0
0
at_TSS
99
19.1
5.7
3.29
13.062
0
0
29MIT_001NRF1none
0
0
before_TSS
32
6.1
2.6
2.33
5.046
0
0
30MIT_001NRF1none
0
0
after_TSS
26
5
2.1
2.33
4.527
0
0
31MIT_002MYCnone
0
0
after_TSS
64
12.3
7.2
1.69
4.475
0
0
32MIT_003ELKnone
0
0
at_TSS
127
24.5
8.1
2.99
13.647
0
0
33MIT_003ELKnone
0
0
after_TSS
83
16
5.8
2.73
9.926
0
0
34MIT_003ELKnone
0
0
before_TSS
57
11
5
2.19
6.283
0
0
35MIT_006SP1none
0
0
at_TSS
240
46.3
26.6
1.73
10.216
0
0
36MIT_006SP1none
0
0
after_TSS
212
40.9
21.1
1.93
11.125
0
0
37MIT_006SP1none
0
0
before_TSS
178
34.3
18.8
1.82
9.091
0
0
38MIT_006SP1none
1
1
at_TSS
37
7.1
3.1
2.23
5.148
0
0
39MIT_008none
0
0
at_TSS
27
5.2
0.8
6.22
11.007
0
0
40MIT_010YY1none
0
0
after_TSS
57
11
3.4
3.2
9.549
0
0
41MIT_010YY1none
0
0
at_TSS
48
9.2
2.5
3.61
9.736
0
0
42MIT_011GABPnone
0
0
at_TSS
78
15
6.1
2.43
8.46
0
0
43MIT_011GABPnone
0
0
after_TSS
46
8.8
5.3
1.66
3.6
0.0003
0.0023
44MIT_013LEFnone
0
1
after_TSS
53
10.2
6.1
1.65
3.847
0.0001
0.001
45MIT_019none
0
0
at_TSS
43
8.3
3
2.73
7.046
0
0
46MIT_019none
0
0
after_TSS
35
6.7
3.7
1.77
3.552
0.0003
0.0027
47MIT_020E4F1none
0
0
at_TSS
74
14.2
5.8
2.45
8.306
0
0
48MIT_020E4F1none
0
0
before_TSS
45
8.6
5
1.71
3.796
0.0001
0.0018
49MIT_020E4F1none
0
0
after_TSS
34
6.5
4.1
1.58
2.791
0.0052
0.0317
50MIT_021none
0
0
after_TSS
58
11.1
4.4
2.49
7.433
0
0
51MIT_021none
0
0
at_TSS
55
10.6
4.1
2.58
7.537
0
0
52MIT_021none
0
0
before_TSS
50
9.6
4.9
1.96
5.021
0
0
53MIT_022none
0
0
at_TSS
92
17.7
5.8
3.03
11.634
0
0
54MIT_022none
0
0
after_TSS
48
9.2
4.4
2.07
5.344
0
0
55MIT_022none
0
0
before_TSS
45
8.6
5.1
1.68
3.665
0.0002
0.0029
56MIT_029none
0
1
after_TSS
30
5.7
2.7
2.1
4.266
0
0.0002
57MIT_030none
0
0
at_TSS
65
12.5
4.6
2.72
8.691
0
0
58MIT_030none
0
0
after_TSS
46
8.8
3.5
2.52
6.678
0
0
59MIT_030none
0
0
before_TSS
30
5.7
3.2
1.8
3.359
0.0007
0.0076
60MIT_039none
0
0
at_TSS
27
5.2
1.9
2.72
5.528
0
0
61MIT_047NFYnone
0
1
after_TSS
26
5
2.8
1.77
3.018
0.0025
0.0134
62MIT_048NFKBnone
0
0
at_TSS
35
6.7
1.4
4.74
10.318
0
0
63MIT_055NFATnone
0
1
after_TSS
56
10.8
6.7
1.6
3.743
0.0001
0.0014
64MIT_056PAX4none
0
1
after_TSS
36
6.9
3.3
2.09
4.66
0
0
65MIT_060FOXOnone
0
1
after_TSS
54
10.4
6
1.72
4.23
0
0.0002
66MIT_062none
0
1
after_TSS
29
5.5
1.6
3.38
7.1
0
0
67MIT_073LEFnone
0
1
after_TSS
46
8.8
4.9
1.8
4.185
0
0.0003
68MIT_076AREB6none
0
1
after_TSS
66
12.7
7.4
1.7
4.578
0
0
69MIT_081none
0
0
after_TSS
102
19.6
9.8
1.99
7.534
0
0
70MIT_081none
0
0
at_TSS
73
14
7.3
1.91
5.905
0
0
71MIT_088none
0
0
after_TSS
31
5.9
2.8
2.09
4.296
0
0.0001
72MIT_088none
0
0
before_TSS
28
5.4
2.8
1.92
3.61
0.0003
0.0035
73MIT_102none
0
0
after_TSS
32
6.1
3.3
1.83
3.575
0.0003
0.0025
74MIT_102none
0
0
at_TSS
26
5
1.6
2.98
5.953
0
0
75MIT_157none
0
0
after_TSS
26
5
1.4
3.38
6.718
0
0
76NCBI_003none
0
0
before_TSS
61
11.7
5.2
2.24
6.728
0
0
77TF_AHRnone
0
0
before_TSS
103
19.8
12.5
1.58
5.075
0
0
78TF_AHRnone
0
0
after_TSS
99
19.1
10.9
1.74
5.979
0
0
79TF_AHRnone
0
0
at_TSS
76
14.6
7.7
1.89
5.962
0
0
80TF_AP2none
0
0
after_TSS
100
19.3
10.6
1.81
6.473
0
0
81TF_AP2Anone
0
0
after_TSS
104
20
12
1.66
5.667
0
0
82TF_ARNTnone
0
0
after_TSS
121
23.3
14.9
1.56
5.419
0
0
83TF_ARNTnone
0
1
at_TSS
36
6.9
3
2.26
5.175
0
0
84TF_ATF1none
0
0
at_TSS
98
18.9
8.2
2.28
8.864
0
0
85TF_ATF6none
0
0
after_TSS
123
23.7
13.1
1.8
7.156
0
0
86TF_ATF6none
0
0
at_TSS
77
14.8
9
1.63
4.608
0
0
87TF_BARBIEnone
0
1
after_TSS
34
6.5
3
2.12
4.606
0
0
88TF_BRNnone
0
1
after_TSS
26
5
2.7
1.8
3.108
0.0018
0.0107
89TF_CP2none
0
1
after_TSS
29
5.5
3.4
1.6
2.639
0.0083
0.0362
90TF_CREBnone
0
0
at_TSS
137
26.4
12.5
2.1
9.636
0
0
91TF_E2Fnone
0
0
after_TSS
63
12.1
4.9
2.46
7.667
0
0
92TF_E2Fnone
0
0
before_TSS
47
9
5.6
1.6
3.378
0.0007
0.0076
93TF_E2Fnone
0
0
at_TSS
45
8.6
3
2.8
7.399
0
0
94TF_EF1Dnone
0
1
after_TSS
31
5.9
2.8
2.12
4.389
0
0.0001
95TF_EGR1none
0
0
after_TSS
137
26.4
12.4
2.11
9.694
0
0
96TF_EGR1none
0
0
at_TSS
90
17.3
8.6
1.99
7.062
0
0
97TF_ELKnone
0
0
at_TSS
149
28.7
11.2
2.56
12.757
0
0
98TF_ELKnone
0
0
after_TSS
117
22.5
9.3
2.41
10.414
0
0
99TF_ELKnone
0
0
before_TSS
88
16.9
9.3
1.81
6.031
0
0
100TF_ELKnone
1
1
at_TSS
26
5
0.9
5.09
9.366
0
0
101TF_ERnone
0
1
after_TSS
39
7.5
4.2
1.77
3.749
0.0001
0.0014
102TF_ETSnone
0
0
at_TSS
153
29.5
13.2
2.22
10.991
0
0
103TF_ETSnone
0
0
after_TSS
117
22.5
13.5
1.66
6.068
0
0
104TF_ETSnone
1
0
before_TSS
26
5
2.2
2.26
4.368
0
0.0002
105TF_GABPnone
0
0
at_TSS
163
31.4
12.1
2.58
13.517
0
0
106TF_GABPnone
0
0
after_TSS
138
26.6
11.3
2.34
11.063
0
0
107TF_GABPnone
0
0
before_TSS
108
20.8
11.5
1.79
6.633
0
0
108TF_GABPnone
1
0
before_TSS
28
5.4
1.3
3.89
7.868
0
0
109TF_GRnone
0
1
after_TSS
28
5.4
2.6
2.01
3.866
0.0001
0.001
110TF_HLFnone
0
1
after_TSS
28
5.4
2.5
2.14
4.21
0
0.0003
111TF_HMXnone
0
1
after_TSS
34
6.5
3.3
1.96
4.104
0
0.0004
112TF_HNF4none
0
1
after_TSS
53
10.2
4.5
2.25
6.285
0
0
113TF_HSFnone
0
1
after_TSS
27
5.2
2.8
1.79
3.166
0.0015
0.009
114TF_IRFnone
0
1
after_TSS
37
7.1
3.9
1.8
3.735
0.0001
0.0014
115TF_MAZRnone
0
0
after_TSS
71
13.7
8.7
1.56
4.002
0
0.0005
116TF_MAZRnone
0
1
at_TSS
27
5.2
2.4
2.16
4.204
0
0.0009
117TF_MEISnone
0
1
after_TSS
46
8.8
5.6
1.58
3.261
0.0011
0.0067
118TF_MSXnone
0
1
after_TSS
29
5.5
2.2
2.47
5.152
0
0
119TF_MYCnone
0
1
after_TSS
35
6.7
3
2.18
4.85
0
0
120TF_MYCnone
0
1
at_TSS
34
6.5
2.9
2.19
4.822
0
0
121TF_MZFnone
0
1
after_TSS
35
6.7
2.8
2.33
5.297
0
0
122TF_NF1none
0
1
after_TSS
36
6.9
3.7
1.83
3.813
0.0001
0.0011
123TF_NFYnone
0
1
after_TSS
34
6.5
2.9
2.19
4.809
0
0
124TF_OCTnone
0
1
after_TSS
27
5.2
3.2
1.62
2.605
0.0091
0.0385
125TF_OLF1none
0
1
after_TSS
34
6.5
2.7
2.4
5.405
0
0
126TF_PAX2none
0
1
after_TSS
27
5.2
3.2
1.61
2.575
0.01
0.041
127TF_PAX3none
0
0
after_TSS
90
17.3
9.2
1.86
6.38
0
0
128TF_PAX3none
0
0
at_TSS
43
8.3
4.9
1.68
3.58
0.0003
0.0026
129TF_PAX6none
0
0
before_TSS
30
5.7
3.7
1.54
2.46
0.0138
0.0758
130TF_PBXnone
0
1
after_TSS
32
6.1
3.5
1.75
3.303
0.0009
0.006
131TF_RFXnone
0
1
after_TSS
38
7.3
4.8
1.5
2.626
0.0086
0.0371
132TF_RFX1none
0
1
after_TSS
54
10.4
5.7
1.81
4.625
0
0
133TF_RORAnone
0
1
after_TSS
29
5.5
3.2
1.74
3.097
0.0019
0.011
134TF_SOX9none
0
1
after_TSS
26
5
2.9
1.68
2.767
0.0056
0.0259
135TF_SP1none
0
0
at_TSS
159
30.6
19
1.61
6.823
0
0
136TF_SP1none
0
0
after_TSS
113
21.8
12
1.81
6.917
0
0
137TF_SP1none
0
0
before_TSS
102
19.6
12.4
1.58
5.071
0
0
138TF_SREBP1none
0
1
after_TSS
51
9.8
5.6
1.75
4.22
0
0.0003
139TF_STAFnone
0
1
after_TSS
31
5.9
3
1.99
4.006
0
0.0006
140TF_STATnone
0
1
after_TSS
30
5.7
3.6
1.6
2.694
0.007
0.0315
141TF_TAXCREB1none
0
0
at_TSS
86
16.6
7.9
2.09
7.387
0
0
142TF_TAXCREB1none
0
0
after_TSS
85
16.4
10.6
1.54
4.287
0
0.0001
143TF_YY1none
0
0
after_TSS
150
28.9
18.9
1.52
5.868
0
0
144TF_YY1none
0
0
at_TSS
106
20.4
10.7
1.89
7.164
0
0
145TF_ZIDnone
0
1
after_TSS
48
9.2
4.3
2.11
5.479
0
0