NIA Mouse Gene Index, mm9

3351. U036608
Annotation: collagen, type II, alpha 1     Gene?: Yes     Source: NM_031163    Symbol:  Col2a1
Chromosome: chr15   Strand: -    Start: 97806032    End: 97835155
List: Negative strand of chr15 (N=3804)

Genome Browsers: NCBI - UCSC - Ensembl
View Regulatory Regions


Exon structure

Domains
IPR006552 - VWC out
IPR000885 - Fibrillar collagen, C-terminal
IPR008845 - Sporozoite P67 surface antigen
IPR010881 - Gammaherpesvirus latent membrane
IPR010340 - Herpesvirus large structural phosphoprotein UL32
IPR001419 - HMW glutenin
IPR001007 - von Willebrand factor, type C
IPR002951 - Atrophin

GO-Ontologies
GO:0048839 - inner ear development
GO:0003007 - heart morphogenesis
GO:0001958 - endochondral ossification
GO:0060021 - palate development
GO:0005737 - cytoplasm
GO:0030199 - collagen fibril organization
GO:0005581 - collagen
GO:0005576 - extracellular region
GO:0035108 - limb morphogenesis
GO:0001502 - cartilage condensation
GO:0001894 - tissue homeostasis
GO:0060348 - bone development
GO:0005615 - extracellular space
GO:0048705 - skeletal system morphogenesis
GO:0005578 - proteinaceous extracellular matrix
GO:0007605 - sensory perception of sound
GO:0002062 - chondrocyte differentiation
GO:0005585 - collagen type II
GO:0043066 - negative regulation of apoptotic process
GO:0048407 - platelet-derived growth factor binding
GO:0071773 - cellular response to BMP stimulus
GO:0060351 - cartilage development involved in endochondral bone morphogenesis
GO:0060272 - embryonic skeletal joint morphogenesis
GO:0051216 - cartilage development
GO:0007601 - visual perception
GO:0031012 - extracellular matrix
GO:0005201 - extracellular matrix structural constituent
GO:0005604 - basement membrane
GO:0006029 - proteoglycan metabolic process
GO:0001501 - skeletal system development
GO:0042472 - inner ear morphogenesis
GO:0010468 - regulation of gene expression