NIA Array Analysis


	Description of NIA Array Analysis tool General description Input data format Gene annotations ANOVA Hierarchical clustering Principal Component Analysis (PCA/SVD/biplot) Pattern matching Download arrayjoin tool (to parse multiple scanner files and combine results in one file)		False discovery rate (FDR) ANOVA with error variance correction 3D PCA/SVD-biplot PCA import for experiment comparison Pattern matching Optional permutation test Server-based software Reference: Sharov, A.A., Dudekula, D.B., Ko, M.S.H. 2005. A web-based tool for principal component and significance analysis of microarray data. Bioinformatics, 21(10): 2548-9. Epub 2005 Feb 25. PMID: 15734774

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